| Geant4 Cross Reference |
1 // 1 //
2 // ******************************************* 2 // ********************************************************************
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4 // * 4 // * *
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13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, *
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17 // * 17 // * *
18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or *
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24 // ******************************************* 24 // ********************************************************************
25 // 25 //
26 // 26 //
27 // 27 //
28 // 28 //
29 // Created: Mar. 31, 2009 Akinori Kimura 29 // Created: Mar. 31, 2009 Akinori Kimura
30 // Sep. 22, 2009 Akinori Kimura : m 30 // Sep. 22, 2009 Akinori Kimura : modify and fix code to support
31 // Pr 31 // PrimitiveScorers and clean up
32 // 32 //
33 // GMocrenFile scene handler 33 // GMocrenFile scene handler
34 34
35 35
36 //----- header files 36 //----- header files
37 #include <fstream> 37 #include <fstream>
38 #include <cstdlib> 38 #include <cstdlib>
39 #include <cstring> 39 #include <cstring>
40 #include <sstream> 40 #include <sstream>
41 #include <sstream> 41 #include <sstream>
42 #include <iomanip> 42 #include <iomanip>
43 43
44 #include "globals.hh" 44 #include "globals.hh"
45 #include "G4VisManager.hh" 45 #include "G4VisManager.hh"
46 46
47 #include "G4GMocrenFile.hh" 47 #include "G4GMocrenFile.hh"
48 #include "G4GMocrenFileSceneHandler.hh" 48 #include "G4GMocrenFileSceneHandler.hh"
49 #include "G4GMocrenFileViewer.hh" 49 #include "G4GMocrenFileViewer.hh"
50 #include "G4Point3D.hh" 50 #include "G4Point3D.hh"
51 #include "G4VisAttributes.hh" 51 #include "G4VisAttributes.hh"
52 #include "G4Scene.hh" 52 #include "G4Scene.hh"
53 #include "G4Transform3D.hh" 53 #include "G4Transform3D.hh"
54 #include "G4Polyhedron.hh" 54 #include "G4Polyhedron.hh"
55 #include "G4Box.hh" 55 #include "G4Box.hh"
56 #include "G4Cons.hh" 56 #include "G4Cons.hh"
57 #include "G4Polyline.hh" 57 #include "G4Polyline.hh"
58 #include "G4Trd.hh" 58 #include "G4Trd.hh"
59 #include "G4Tubs.hh" 59 #include "G4Tubs.hh"
60 #include "G4Trap.hh" 60 #include "G4Trap.hh"
61 #include "G4Torus.hh" 61 #include "G4Torus.hh"
62 #include "G4Sphere.hh" 62 #include "G4Sphere.hh"
63 #include "G4Para.hh" 63 #include "G4Para.hh"
64 #include "G4Text.hh" 64 #include "G4Text.hh"
65 #include "G4Circle.hh" 65 #include "G4Circle.hh"
66 #include "G4Square.hh" 66 #include "G4Square.hh"
67 #include "G4VPhysicalVolume.hh" 67 #include "G4VPhysicalVolume.hh"
68 #include "G4PhysicalVolumeModel.hh" 68 #include "G4PhysicalVolumeModel.hh"
69 #include "G4LogicalVolume.hh" 69 #include "G4LogicalVolume.hh"
70 #include "G4Material.hh" 70 #include "G4Material.hh"
71 71
72 #include "G4VPVParameterisation.hh" 72 #include "G4VPVParameterisation.hh"
73 #include "G4VVolumeMaterialScanner.hh" 73 #include "G4VVolumeMaterialScanner.hh"
74 #include "G4VisTrajContext.hh" 74 #include "G4VisTrajContext.hh"
75 #include "G4TrajectoriesModel.hh" 75 #include "G4TrajectoriesModel.hh"
76 #include "G4VTrajectoryModel.hh" 76 #include "G4VTrajectoryModel.hh"
77 #include "G4TrajectoryDrawByCharge.hh" 77 #include "G4TrajectoryDrawByCharge.hh"
78 #include "G4HitsModel.hh" 78 #include "G4HitsModel.hh"
79 #include "G4GMocrenMessenger.hh" 79 #include "G4GMocrenMessenger.hh"
80 //#include "G4PSHitsModel.hh" 80 //#include "G4PSHitsModel.hh"
81 #include "G4GMocrenIO.hh" 81 #include "G4GMocrenIO.hh"
82 #include "G4VNestedParameterisation.hh" 82 #include "G4VNestedParameterisation.hh"
83 #include "G4GMocrenTouchable.hh" 83 #include "G4GMocrenTouchable.hh"
84 #include "G4GMocrenFileCTtoDensityMap.hh" 84 #include "G4GMocrenFileCTtoDensityMap.hh"
85 #include "G4PhantomParameterisation.hh" 85 #include "G4PhantomParameterisation.hh"
>> 86 #include "G4PhysicalVolumeSearchScene.hh"
86 87
87 #include "G4ScoringManager.hh" 88 #include "G4ScoringManager.hh"
88 #include "G4ScoringBox.hh" 89 #include "G4ScoringBox.hh"
89 90
90 #include "G4PhysicalConstants.hh" 91 #include "G4PhysicalConstants.hh"
91 #include "G4SystemOfUnits.hh" 92 #include "G4SystemOfUnits.hh"
92 93
93 #include <utility> <<
94 <<
95 //----- constants 94 //----- constants
96 const char GDD_FILE_HEADER [] = "g4_"; 95 const char GDD_FILE_HEADER [] = "g4_";
97 const char DEFAULT_GDD_FILE_NAME[] = "g4_00.g 96 const char DEFAULT_GDD_FILE_NAME[] = "g4_00.gdd";
98 97
99 const G4int FR_MAX_FILE_NUM = 100 ; 98 const G4int FR_MAX_FILE_NUM = 100 ;
100 const G4int MAX_NUM_TRAJECTORIES = 100000; 99 const G4int MAX_NUM_TRAJECTORIES = 100000;
101 100
102 //-- for a debugging 101 //-- for a debugging
103 const G4bool GFDEBUG = false; 102 const G4bool GFDEBUG = false;
104 const G4bool GFDEBUG_TRK = false;//true; 103 const G4bool GFDEBUG_TRK = false;//true;
105 const G4bool GFDEBUG_HIT = false;//true; 104 const G4bool GFDEBUG_HIT = false;//true;
106 const G4bool GFDEBUG_DIGI = false;//true; 105 const G4bool GFDEBUG_DIGI = false;//true;
107 const G4int GFDEBUG_DET = 0; // 0: false 106 const G4int GFDEBUG_DET = 0; // 0: false
108 107
109 ////////////////////// 108 //////////////////////
110 // static variables // 109 // static variables //
111 ////////////////////// 110 //////////////////////
112 111
113 //----- static variables 112 //----- static variables
114 G4int G4GMocrenFileSceneHandler::kSceneIdCount 113 G4int G4GMocrenFileSceneHandler::kSceneIdCount = 0;
115 114
116 /////////////////////////// 115 ///////////////////////////
117 // Driver-dependent part // 116 // Driver-dependent part //
118 /////////////////////////// 117 ///////////////////////////
119 118
120 119
121 //----- G4GMocrenFileSceneHandler, constructor 120 //----- G4GMocrenFileSceneHandler, constructor
122 G4GMocrenFileSceneHandler::G4GMocrenFileSceneH 121 G4GMocrenFileSceneHandler::G4GMocrenFileSceneHandler(G4GMocrenFile& system,
123 G4GMocrenMessenger & messenge 122 G4GMocrenMessenger & messenger,
124 const G4String& name) 123 const G4String& name)
125 : G4VSceneHandler(system, kSceneIdCount++, n 124 : G4VSceneHandler(system, kSceneIdCount++, name),
126 kSystem(system), 125 kSystem(system),
127 kMessenger(messenger), 126 kMessenger(messenger),
128 kgMocrenIO(new G4GMocrenIO()), 127 kgMocrenIO(new G4GMocrenIO()),
129 kbSetModalityVoxelSize(false), 128 kbSetModalityVoxelSize(false),
130 kbModelingTrajectory(false), 129 kbModelingTrajectory(false),
131 // kGddDest(0), 130 // kGddDest(0),
132 kFlagInModeling(false), 131 kFlagInModeling(false),
133 kFlagSaving_g4_gdd(false), 132 kFlagSaving_g4_gdd(false),
134 kFlagParameterization(0), 133 kFlagParameterization(0),
135 kFlagProcessedInteractiveScorer(false) { 134 kFlagProcessedInteractiveScorer(false) {
136 135
137 // g4.gdd filename and its directory 136 // g4.gdd filename and its directory
138 if(std::getenv("G4GMocrenFile_DEST_DIR") == 137 if(std::getenv("G4GMocrenFile_DEST_DIR") == NULL) {
139 kGddDestDir[0] = '\0'; 138 kGddDestDir[0] = '\0';
140 //std::strcpy(kGddDestDir , ""); 139 //std::strcpy(kGddDestDir , ""); // output dir
141 //std::strcpy(kGddFileName, DEFAULT_GDD_FI 140 //std::strcpy(kGddFileName, DEFAULT_GDD_FILE_NAME); // filename
142 std::strncpy(kGddFileName, DEFAULT_GDD_FIL 141 std::strncpy(kGddFileName, DEFAULT_GDD_FILE_NAME,
143 std::strlen(DEFAULT_GDD_FILE_NAME)+1); 142 std::strlen(DEFAULT_GDD_FILE_NAME)+1); // filename
144 } else { 143 } else {
145 const char * env = std::getenv("G4GMocrenF 144 const char * env = std::getenv("G4GMocrenFile_DEST_DIR");
146 G4int len = (G4int)std::strlen(env); << 145 int len = std::strlen(env);
147 if(len > 256) { 146 if(len > 256) {
148 G4Exception("G4GMocrenFileSceneHandler:: 147 G4Exception("G4GMocrenFileSceneHandler::G4GMocrenFileSceneHandler(*)",
149 "gMocren1000", FatalExceptio 148 "gMocren1000", FatalException,
150 "Invalid length of string se 149 "Invalid length of string set in G4GMocrenFile_DEST_DIR");
151 } 150 }
152 std::strncpy(kGddDestDir, env, len+1); // 151 std::strncpy(kGddDestDir, env, len+1); // output dir
153 std::strncpy(kGddFileName, DEFAULT_GDD_FIL 152 std::strncpy(kGddFileName, DEFAULT_GDD_FILE_NAME,
154 std::strlen(DEFAULT_GDD_FILE_ 153 std::strlen(DEFAULT_GDD_FILE_NAME)+1); // filename
155 } 154 }
156 155
157 // maximum number of g4.gdd files in the des 156 // maximum number of g4.gdd files in the dest directory
158 kMaxFileNum = FR_MAX_FILE_NUM ; // initializ 157 kMaxFileNum = FR_MAX_FILE_NUM ; // initialization
159 if ( std::getenv( "G4GMocrenFile_MAX_FILE_NU 158 if ( std::getenv( "G4GMocrenFile_MAX_FILE_NUM" ) != NULL ) {
160 char * pcFileNum = std::getenv("G4GMocrenF 159 char * pcFileNum = std::getenv("G4GMocrenFile_MAX_FILE_NUM");
161 char c10FileNum[10]; 160 char c10FileNum[10];
162 std::strncpy(c10FileNum, pcFileNum, 9); 161 std::strncpy(c10FileNum, pcFileNum, 9);
163 c10FileNum[9] = '\0'; 162 c10FileNum[9] = '\0';
164 kMaxFileNum = std::atoi(c10FileNum); 163 kMaxFileNum = std::atoi(c10FileNum);
165 164
166 } else { 165 } else {
167 kMaxFileNum = FR_MAX_FILE_NUM ; 166 kMaxFileNum = FR_MAX_FILE_NUM ;
168 } 167 }
169 if( kMaxFileNum < 1 ) { kMaxFileNum = 1 ; } 168 if( kMaxFileNum < 1 ) { kMaxFileNum = 1 ; }
170 169
171 InitializeParameters(); 170 InitializeParameters();
172 171
173 } 172 }
174 173
175 174
176 //----- G4GMocrenFileSceneHandler, destructor 175 //----- G4GMocrenFileSceneHandler, destructor
177 G4GMocrenFileSceneHandler::~G4GMocrenFileScene 176 G4GMocrenFileSceneHandler::~G4GMocrenFileSceneHandler ()
178 { 177 {
179 if(GFDEBUG || G4VisManager::GetVerbosity() > 178 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
180 G4cout << "***** ~G4GMocrenFileSceneHand 179 G4cout << "***** ~G4GMocrenFileSceneHandler" << G4endl;
181 180
182 if(kGddDest) { 181 if(kGddDest) {
183 //----- End of modeling 182 //----- End of modeling
184 // close g4.gdd 183 // close g4.gdd
185 GFEndModeling(); 184 GFEndModeling();
186 } 185 }
187 if(kgMocrenIO != NULL) delete kgMocrenIO; 186 if(kgMocrenIO != NULL) delete kgMocrenIO;
188 187
189 } 188 }
190 189
191 //----- initialize all parameters 190 //----- initialize all parameters
192 void G4GMocrenFileSceneHandler::InitializePara 191 void G4GMocrenFileSceneHandler::InitializeParameters() {
193 192
194 kbSetModalityVoxelSize = false; 193 kbSetModalityVoxelSize = false;
195 194
196 for(G4int i = 0; i < 3; i++) { 195 for(G4int i = 0; i < 3; i++) {
197 kModalitySize[i] = 0; 196 kModalitySize[i] = 0;
198 kNestedVolumeDimension[i] = 0; 197 kNestedVolumeDimension[i] = 0;
199 kNestedVolumeDirAxis[i] = -1; 198 kNestedVolumeDirAxis[i] = -1;
200 } 199 }
201 200
202 // delete kgMocrenIO; 201 // delete kgMocrenIO;
203 202
204 } 203 }
205 204
206 //----- 205 //-----
207 void G4GMocrenFileSceneHandler::SetGddFileName 206 void G4GMocrenFileSceneHandler::SetGddFileName()
208 { 207 {
209 // g4_00.gdd, g4_01.gdd, ..., g4_MAX_FILE_IN 208 // g4_00.gdd, g4_01.gdd, ..., g4_MAX_FILE_INDEX.gdd
210 const G4int MAX_FILE_INDEX = kMaxFileNum - 1 209 const G4int MAX_FILE_INDEX = kMaxFileNum - 1 ;
211 210
212 // dest directory (null if no environmental 211 // dest directory (null if no environmental variables is set)
213 std::strncpy(kGddFileName, kGddDestDir, size 212 std::strncpy(kGddFileName, kGddDestDir, sizeof(kGddFileName)-1);
214 kGddFileName[sizeof(kGddFileName)-1] = '\0'; 213 kGddFileName[sizeof(kGddFileName)-1] = '\0';
215 214
216 // create full path name (default) 215 // create full path name (default)
217 std::strncat ( kGddFileName, DEFAULT_GDD_FIL 216 std::strncat ( kGddFileName, DEFAULT_GDD_FILE_NAME,
218 sizeof(kGddFileName) - std::st 217 sizeof(kGddFileName) - std::strlen(kGddFileName) - 1);
219 218
220 // Automatic updation of file names 219 // Automatic updation of file names
221 static G4int currentNumber = 0; 220 static G4int currentNumber = 0;
222 for( G4int i = currentNumber ; i < kMaxFileN 221 for( G4int i = currentNumber ; i < kMaxFileNum ; i++) {
223 222
224 // Message in the final execution 223 // Message in the final execution
225 if( i == MAX_FILE_INDEX ) 224 if( i == MAX_FILE_INDEX )
226 { 225 {
227 if (G4VisManager::GetVerbosity() >= G4VisMan 226 if (G4VisManager::GetVerbosity() >= G4VisManager::warnings) {
228 G4cout << "=============================== 227 G4cout << "===========================================" << G4endl;
229 G4cout << "WARNING MESSAGE from GMocrenFil 228 G4cout << "WARNING MESSAGE from GMocrenFile driver: " << G4endl;
230 G4cout << " This file name is the final o 229 G4cout << " This file name is the final one in the " << G4endl;
231 G4cout << " automatic updation of the out 230 G4cout << " automatic updation of the output file name." << G4endl;
232 G4cout << " You may overwrite existing fi 231 G4cout << " You may overwrite existing files, i.e. " << G4endl;
233 G4cout << " g4_XX.gdd." << G4endl; 232 G4cout << " g4_XX.gdd." << G4endl;
234 G4cout << "=============================== 233 G4cout << "===========================================" << G4endl;
235 } 234 }
236 } 235 }
237 236
238 // re-determine file name as G4GMocrenFile 237 // re-determine file name as G4GMocrenFile_DEST_DIR/g4_XX.gdd
239 std::ostringstream filename; 238 std::ostringstream filename;
240 filename 239 filename
241 << kGddDestDir << GDD_FILE_HEADER 240 << kGddDestDir << GDD_FILE_HEADER
242 << std::setw(2) << std::setfill('0') << i 241 << std::setw(2) << std::setfill('0') << i << ".wrl";
243 strncpy(kGddFileName,filename.str().c_str( 242 strncpy(kGddFileName,filename.str().c_str(),sizeof(kGddFileName)-1);
244 kGddFileName[sizeof(kGddFileName)-1] = '\0 243 kGddFileName[sizeof(kGddFileName)-1] = '\0';
245 244
246 // check validity of the file name 245 // check validity of the file name
247 std::ifstream fin(kGddFileName); 246 std::ifstream fin(kGddFileName);
248 if(GFDEBUG) 247 if(GFDEBUG)
249 G4cout << "FILEOPEN: " << i << " : " << 248 G4cout << "FILEOPEN: " << i << " : " << kGddFileName << fin.fail()
250 << G4endl; 249 << G4endl;
251 if(!fin) { 250 if(!fin) {
252 // new file 251 // new file
253 fin.close(); 252 fin.close();
254 currentNumber = i+1; 253 currentNumber = i+1;
255 break; 254 break;
256 } else { 255 } else {
257 // already exists (try next) 256 // already exists (try next)
258 fin.close(); 257 fin.close();
259 } 258 }
260 259
261 } // for 260 } // for
262 261
263 G4cout << "================================= 262 G4cout << "======================================================================" << G4endl;
264 G4cout << "Output file: " << kGddFileName 263 G4cout << "Output file: " << kGddFileName << G4endl;
265 G4cout << "Destination directory (current di 264 G4cout << "Destination directory (current dir if NULL): " << kGddDestDir << G4endl;
266 G4cout << "Maximum number of files in the de 265 G4cout << "Maximum number of files in the destination directory: " << kMaxFileNum << G4endl;
267 G4cout << "Note:" << G4endl; 266 G4cout << "Note:" << G4endl;
268 G4cout << " * The maximum number is customi 267 G4cout << " * The maximum number is customizable as: " << G4endl;
269 G4cout << " % setenv G4GMocrenFile_MAX 268 G4cout << " % setenv G4GMocrenFile_MAX_FILE_NUM number " << G4endl;
270 G4cout << " * The destination directory is 269 G4cout << " * The destination directory is customizable as:" << G4endl;
271 G4cout << " % setenv G4GMocrenFile_DES 270 G4cout << " % setenv G4GMocrenFile_DEST_DIR dir_name/ " << G4endl;
272 G4cout << " ** Do not forget \"/\" at th 271 G4cout << " ** Do not forget \"/\" at the end of the dir_name, e.g. \"./tmp/\"." << G4endl;
273 //G4cout << " dir_name, e.g. \"./tmp/ 272 //G4cout << " dir_name, e.g. \"./tmp/\"." << G4endl;
274 G4cout << G4endl; 273 G4cout << G4endl;
275 G4cout << "Maximum number of trajectories is 274 G4cout << "Maximum number of trajectories is set to " << MAX_NUM_TRAJECTORIES << "."<< G4endl;
276 G4cout << "================================= 275 G4cout << "======================================================================" << G4endl;
277 276
278 } // G4GMocrenFileSceneHandler::SetGddFileName 277 } // G4GMocrenFileSceneHandler::SetGddFileName()
279 278
280 279
281 //----- 280 //-----
282 void G4GMocrenFileSceneHandler::BeginSavingGd 281 void G4GMocrenFileSceneHandler::BeginSavingGdd( void )
283 { 282 {
284 if(GFDEBUG || G4VisManager::GetVerbosity() > 283 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
285 G4cout << "***** BeginSavingGdd (called) 284 G4cout << "***** BeginSavingGdd (called)" << G4endl;
286 285
287 if( !IsSavingGdd() ) { 286 if( !IsSavingGdd() ) {
288 287
289 if(GFDEBUG || G4VisManager::GetVerbosity() 288 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations) {
290 G4cout << "***** (star 289 G4cout << "***** (started) " ;
291 G4cout << "(open g4.gdd, ##)" << G4endl 290 G4cout << "(open g4.gdd, ##)" << G4endl;
292 } 291 }
293 292
294 SetGddFileName() ; // result set to kGddFi 293 SetGddFileName() ; // result set to kGddFileName
295 kFlagSaving_g4_gdd = true; 294 kFlagSaving_g4_gdd = true;
296 295
297 296
298 G4GMocrenFileCTtoDensityMap ctdens; 297 G4GMocrenFileCTtoDensityMap ctdens;
299 short minmax[2]; 298 short minmax[2];
300 minmax[0] = ctdens.GetMinCT(); 299 minmax[0] = ctdens.GetMinCT();
301 minmax[1] = ctdens.GetMaxCT(); 300 minmax[1] = ctdens.GetMaxCT();
302 kgMocrenIO->setModalityImageMinMax(minmax) 301 kgMocrenIO->setModalityImageMinMax(minmax);
303 std::vector<G4float> map; 302 std::vector<G4float> map;
304 G4float dens; 303 G4float dens;
305 for(G4int i = minmax[0]; i <= minmax[1]; i 304 for(G4int i = minmax[0]; i <= minmax[1]; i++) {
306 dens = ctdens.GetDensity(i); 305 dens = ctdens.GetDensity(i);
307 map.push_back(dens); 306 map.push_back(dens);
308 } 307 }
309 kgMocrenIO->setModalityImageDensityMap(map 308 kgMocrenIO->setModalityImageDensityMap(map);
310 309
311 /* 310 /*
312 G4String fname = "modality-map.dat"; 311 G4String fname = "modality-map.dat";
313 std::ifstream ifile(fname); 312 std::ifstream ifile(fname);
314 if(ifile) { 313 if(ifile) {
315 short minmax[2]; 314 short minmax[2];
316 ifile >> minmax[0] >> minmax[1]; 315 ifile >> minmax[0] >> minmax[1];
317 kgMocrenIO->setModalityImageMinMax(minma 316 kgMocrenIO->setModalityImageMinMax(minmax);
318 std::vector<G4float> map; 317 std::vector<G4float> map;
319 G4float dens; 318 G4float dens;
320 for(G4int i = minmax[0]; i <= minmax[1]; 319 for(G4int i = minmax[0]; i <= minmax[1]; i++) {
321 ifile >> dens; 320 ifile >> dens;
322 map.push_back(dens); 321 map.push_back(dens);
323 } 322 }
324 kgMocrenIO->setModalityImageDensityMap(m 323 kgMocrenIO->setModalityImageDensityMap(map);
325 324
326 } else { 325 } else {
327 G4cout << "cann't open the file : " << f 326 G4cout << "cann't open the file : " << fname << G4endl;
328 } 327 }
329 */ 328 */
330 329
331 // mesh size 330 // mesh size
332 //kMessenger.getNoVoxels(kModalitySize[0], 331 //kMessenger.getNoVoxels(kModalitySize[0], kModalitySize[1], kModalitySize[2]);
333 //kgMocrenIO->setModalityImageSize(kModali 332 //kgMocrenIO->setModalityImageSize(kModalitySize);
334 333
335 // initializations 334 // initializations
336 //kgMocrenIO->clearModalityImage(); 335 //kgMocrenIO->clearModalityImage();
337 kgMocrenIO->clearDoseDistAll(); 336 kgMocrenIO->clearDoseDistAll();
338 kgMocrenIO->clearROIAll(); 337 kgMocrenIO->clearROIAll();
339 kgMocrenIO->clearTracks(); 338 kgMocrenIO->clearTracks();
340 kgMocrenIO->clearDetector(); 339 kgMocrenIO->clearDetector();
341 std::vector<Detector>::iterator itr = kDet 340 std::vector<Detector>::iterator itr = kDetectors.begin();
342 for(; itr != kDetectors.end(); itr++) { 341 for(; itr != kDetectors.end(); itr++) {
343 itr->clear(); 342 itr->clear();
344 } 343 }
345 kDetectors.clear(); 344 kDetectors.clear();
346 345
347 kNestedHitsList.clear(); 346 kNestedHitsList.clear();
348 kNestedVolumeNames.clear(); 347 kNestedVolumeNames.clear();
349 348
350 } 349 }
351 } 350 }
352 351
353 void G4GMocrenFileSceneHandler::EndSavingGdd 352 void G4GMocrenFileSceneHandler::EndSavingGdd ( void )
354 { 353 {
355 if(GFDEBUG || G4VisManager::GetVerbosity() > 354 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
356 G4cout << "***** EndSavingGdd (called)" << 355 G4cout << "***** EndSavingGdd (called)" << G4endl;
357 356
358 if(IsSavingGdd()) { 357 if(IsSavingGdd()) {
359 if(GFDEBUG || G4VisManager::GetVerbosity() 358 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
360 G4cout << "***** (starte 359 G4cout << "***** (started) (close "
361 << kGddFileName << ")" << G4endl; 360 << kGddFileName << ")" << G4endl;
362 361
363 if(kGddDest) kGddDest.close(); 362 if(kGddDest) kGddDest.close();
364 kFlagSaving_g4_gdd = false; 363 kFlagSaving_g4_gdd = false;
365 364
366 std::map<Index3D, G4float>::iterator itr = 365 std::map<Index3D, G4float>::iterator itr = kNestedModality.begin();
367 G4int xmax=0, ymax=0, zmax=0; 366 G4int xmax=0, ymax=0, zmax=0;
368 for(; itr != kNestedModality.end(); itr++) 367 for(; itr != kNestedModality.end(); itr++) {
369 if(itr->first.x > xmax) xmax = itr->firs 368 if(itr->first.x > xmax) xmax = itr->first.x;
370 if(itr->first.y > ymax) ymax = itr->firs 369 if(itr->first.y > ymax) ymax = itr->first.y;
371 if(itr->first.z > zmax) zmax = itr->firs 370 if(itr->first.z > zmax) zmax = itr->first.z;
372 } 371 }
373 // mesh size 372 // mesh size
374 kModalitySize[0] = xmax+1; 373 kModalitySize[0] = xmax+1;
375 kModalitySize[1] = ymax+1; 374 kModalitySize[1] = ymax+1;
376 kModalitySize[2] = zmax+1; 375 kModalitySize[2] = zmax+1;
377 kgMocrenIO->setModalityImageSize(kModality 376 kgMocrenIO->setModalityImageSize(kModalitySize);
378 if(GFDEBUG) G4cout << "gMocren-file driver 377 if(GFDEBUG) G4cout << "gMocren-file driver : modality size : "
379 << kModalitySize[0] << " x " 378 << kModalitySize[0] << " x "
380 << kModalitySize[1] << " x " 379 << kModalitySize[1] << " x "
381 << kModalitySize[2] << G4endl; 380 << kModalitySize[2] << G4endl;
382 381
383 G4int nxy = kModalitySize[0]*kModalitySize 382 G4int nxy = kModalitySize[0]*kModalitySize[1];
384 //std::map<G4int, G4float>::iterator itr; 383 //std::map<G4int, G4float>::iterator itr;
385 for(G4int z = 0; z < kModalitySize[2]; z++ 384 for(G4int z = 0; z < kModalitySize[2]; z++) {
386 short * modality = new short[nxy]; 385 short * modality = new short[nxy];
387 for(G4int y = 0; y < kModalitySize[1]; y 386 for(G4int y = 0; y < kModalitySize[1]; y++) {
388 for(G4int x = 0; x < kModalitySize[0]; x++) 387 for(G4int x = 0; x < kModalitySize[0]; x++) {
389 //for(G4int x = kModalitySize[0]-1; x >= 0 388 //for(G4int x = kModalitySize[0]-1; x >= 0 ; x--) {
390 //G4int ixy = x + (kModalitySize[1]-y-1)*k 389 //G4int ixy = x + (kModalitySize[1]-y-1)*kModalitySize[0];
391 390
392 G4int ixy = x + y*kModalitySize[0]; 391 G4int ixy = x + y*kModalitySize[0];
393 Index3D idx(x,y,z); 392 Index3D idx(x,y,z);
394 itr = kNestedModality.find(idx); 393 itr = kNestedModality.find(idx);
395 if(itr != kNestedModality.end()) { 394 if(itr != kNestedModality.end()) {
396 395
397 modality[ixy] = kgMocrenIO->convertDensi 396 modality[ixy] = kgMocrenIO->convertDensityToHU(itr->second);
398 } else { 397 } else {
399 modality[ixy] = -1024; 398 modality[ixy] = -1024;
400 } 399 }
401 400
402 } 401 }
403 } 402 }
404 kgMocrenIO->setModalityImage(modality); 403 kgMocrenIO->setModalityImage(modality);
405 } 404 }
406 405
407 //-- dose 406 //-- dose
408 size_t nhits = kNestedHitsList.size(); 407 size_t nhits = kNestedHitsList.size();
409 if(GFDEBUG) G4cout << "gMocren-file driver 408 if(GFDEBUG) G4cout << "gMocren-file driver : # hits = " << nhits << G4endl;
410 409
411 std::map<Index3D, G4double>::iterator hits 410 std::map<Index3D, G4double>::iterator hitsItr;
412 std::map<G4String, std::map<Index3D, G4dou 411 std::map<G4String, std::map<Index3D, G4double> >::iterator hitsListItr = kNestedHitsList.begin();
413 412
414 for(G4int n = 0; hitsListItr != kNestedHit 413 for(G4int n = 0; hitsListItr != kNestedHitsList.end(); hitsListItr++, n++) {
415 414
416 kgMocrenIO->newDoseDist(); 415 kgMocrenIO->newDoseDist();
417 kgMocrenIO->setDoseDistName(hitsListItr- 416 kgMocrenIO->setDoseDistName(hitsListItr->first, n);
418 kgMocrenIO->setDoseDistSize(kModalitySiz 417 kgMocrenIO->setDoseDistSize(kModalitySize, n);
419 418
420 G4double minmax[2] = {DBL_MAX, -DBL_MAX} 419 G4double minmax[2] = {DBL_MAX, -DBL_MAX};
421 for(G4int z = 0 ; z < kModalitySize[2]; 420 for(G4int z = 0 ; z < kModalitySize[2]; z++) {
422 G4double * values = new G4double[nxy]; 421 G4double * values = new G4double[nxy];
423 for(G4int y = 0; y < kModalitySize[1]; y++) 422 for(G4int y = 0; y < kModalitySize[1]; y++) {
424 for(G4int x = 0; x < kModalitySize[0]; x++ 423 for(G4int x = 0; x < kModalitySize[0]; x++) {
425 424
426 G4int ixy = x + y*kModalitySize[0]; 425 G4int ixy = x + y*kModalitySize[0];
427 Index3D idx(x,y,z); 426 Index3D idx(x,y,z);
428 hitsItr = hitsListItr->second.find(idx); 427 hitsItr = hitsListItr->second.find(idx);
429 if(hitsItr != hitsListItr->second.end()) 428 if(hitsItr != hitsListItr->second.end()) {
430 429
431 values[ixy] = hitsItr->second; 430 values[ixy] = hitsItr->second;
432 } else { 431 } else {
433 values[ixy] = 0.; 432 values[ixy] = 0.;
434 } 433 }
435 if(values[ixy] < minmax[0]) minmax[0] = 434 if(values[ixy] < minmax[0]) minmax[0] = values[ixy];
436 if(values[ixy] > minmax[1]) minmax[1] = 435 if(values[ixy] > minmax[1]) minmax[1] = values[ixy];
437 } 436 }
438 } 437 }
439 kgMocrenIO->setDoseDist(values, n); 438 kgMocrenIO->setDoseDist(values, n);
440 } 439 }
441 kgMocrenIO->setDoseDistMinMax(minmax, n) 440 kgMocrenIO->setDoseDistMinMax(minmax, n);
442 G4double lower = 0.; 441 G4double lower = 0.;
443 if(minmax[0] < 0) lower = minmax[0]; 442 if(minmax[0] < 0) lower = minmax[0];
444 G4double scale = (minmax[1]-lower)/25000 443 G4double scale = (minmax[1]-lower)/25000.;
445 kgMocrenIO->setDoseDistScale(scale, n); 444 kgMocrenIO->setDoseDistScale(scale, n);
446 G4String sunit("unit?"); //temporarily 445 G4String sunit("unit?"); //temporarily
447 kgMocrenIO->setDoseDistUnit(sunit, n); 446 kgMocrenIO->setDoseDistUnit(sunit, n);
448 } 447 }
449 448
450 449
451 //-- draw axes 450 //-- draw axes
452 if(false) {//true,false 451 if(false) {//true,false
453 G4ThreeVector trans; 452 G4ThreeVector trans;
454 G4RotationMatrix rot; 453 G4RotationMatrix rot;
455 trans = kVolumeTrans3D.getTranslation(); 454 trans = kVolumeTrans3D.getTranslation();
456 rot = kVolumeTrans3D.getRotation().inver 455 rot = kVolumeTrans3D.getRotation().inverse();
457 // x 456 // x
458 std::vector<G4float *> tracks; 457 std::vector<G4float *> tracks;
459 unsigned char colors[3]; 458 unsigned char colors[3];
460 G4float * trk = new G4float[6]; 459 G4float * trk = new G4float[6];
461 tracks.push_back(trk); 460 tracks.push_back(trk);
462 461
463 G4ThreeVector orig(0.,0.,0), xa(2000.,0. 462 G4ThreeVector orig(0.,0.,0), xa(2000.,0.,0.), ya(0.,2000.,0.), za(0.,0.,2000.);
464 orig -= trans; 463 orig -= trans;
465 orig.transform(rot); 464 orig.transform(rot);
466 xa -= trans; 465 xa -= trans;
467 xa.transform(rot); 466 xa.transform(rot);
468 ya -= trans; 467 ya -= trans;
469 ya.transform(rot); 468 ya.transform(rot);
470 za -= trans; 469 za -= trans;
471 za.transform(rot); 470 za.transform(rot);
472 for(G4int i = 0; i < 3; i++) trk[i] = or 471 for(G4int i = 0; i < 3; i++) trk[i] = orig[i];
473 for(G4int i = 0; i < 3; i++) trk[i+3] = 472 for(G4int i = 0; i < 3; i++) trk[i+3] = xa[i];
474 colors[0] = 255; colors[1] = 0; colors[2 473 colors[0] = 255; colors[1] = 0; colors[2] = 0;
475 kgMocrenIO->addTrack(tracks, colors); 474 kgMocrenIO->addTrack(tracks, colors);
476 // y 475 // y
477 for(G4int i = 0; i < 3; i++) trk[i+3] = 476 for(G4int i = 0; i < 3; i++) trk[i+3] = ya[i];
478 colors[0] = 0; colors[1] = 255; colors[2 477 colors[0] = 0; colors[1] = 255; colors[2] = 0;
479 kgMocrenIO->addTrack(tracks, colors); 478 kgMocrenIO->addTrack(tracks, colors);
480 // z 479 // z
481 for(G4int i = 0; i < 3; i++) trk[i+3] = 480 for(G4int i = 0; i < 3; i++) trk[i+3] = za[i];
482 colors[0] = 0; colors[1] = 0; colors[2] 481 colors[0] = 0; colors[1] = 0; colors[2] = 255;
483 kgMocrenIO->addTrack(tracks, colors); 482 kgMocrenIO->addTrack(tracks, colors);
484 } 483 }
485 484
486 //-- detector 485 //-- detector
487 ExtractDetector(); 486 ExtractDetector();
488 487
489 488
490 if(GFDEBUG_DET) G4cout << ">>>>>>>>>>>>>>> 489 if(GFDEBUG_DET) G4cout << ">>>>>>>>>>>>>>>>>>>>>> (";
491 std::vector<G4float> transformObjects; 490 std::vector<G4float> transformObjects;
492 for(G4int i = 0; i < 3; i++) { 491 for(G4int i = 0; i < 3; i++) {
493 // need to check!! 492 // need to check!!
494 transformObjects.push_back((kVolumeSize[ 493 transformObjects.push_back((kVolumeSize[i]/2. - kVoxelDimension[i]/2.));
495 if(GFDEBUG_DET) G4cout << transformObjec 494 if(GFDEBUG_DET) G4cout << transformObjects[i] << ", ";
496 } 495 }
497 if(GFDEBUG_DET) G4cout << ")" << G4endl; 496 if(GFDEBUG_DET) G4cout << ")" << G4endl;
498 497
499 498
500 kgMocrenIO->translateTracks(transformObjec 499 kgMocrenIO->translateTracks(transformObjects);
501 kgMocrenIO->translateDetector(transformObj 500 kgMocrenIO->translateDetector(transformObjects);
502 501
503 // store 502 // store
504 kgMocrenIO->storeData(kGddFileName); 503 kgMocrenIO->storeData(kGddFileName);
505 } 504 }
506 505
507 } 506 }
508 507
509 508
510 //----- 509 //-----
511 void G4GMocrenFileSceneHandler::GFBeginModelin 510 void G4GMocrenFileSceneHandler::GFBeginModeling( void )
512 { 511 {
513 G4VSceneHandler::BeginModeling(); 512 G4VSceneHandler::BeginModeling();
514 513
515 if( !GFIsInModeling() ) { 514 if( !GFIsInModeling() ) {
516 515
517 if(GFDEBUG || G4VisManager::GetVerbosity() 516 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
518 G4cout << "***** G4GMocrenFileSceneHandl 517 G4cout << "***** G4GMocrenFileSceneHandler::GFBeginModeling (called & started)" << G4endl;
519 518
520 //----- Send saving command and heading co 519 //----- Send saving command and heading comment
521 BeginSavingGdd(); 520 BeginSavingGdd();
522 521
523 kFlagInModeling = true ; 522 kFlagInModeling = true ;
524 523
525 // These models are entrusted to user comm 524 // These models are entrusted to user commands /vis/scene/add/psHits or hits
526 //GetScene()->AddEndOfEventModel(new G4PSH 525 //GetScene()->AddEndOfEventModel(new G4PSHitsModel());
527 //GetScene()->AddEndOfRunModel(new G4PSHit 526 //GetScene()->AddEndOfRunModel(new G4PSHitsModel());
528 //scene->AddEndOfEventModel(new G4HitsMode 527 //scene->AddEndOfEventModel(new G4HitsModel());
529 if(GFDEBUG_HIT) { 528 if(GFDEBUG_HIT) {
530 G4Scene * scene = GetScene(); 529 G4Scene * scene = GetScene();
531 std::vector<G4Scene::Model> vmodel = sce 530 std::vector<G4Scene::Model> vmodel = scene->GetEndOfEventModelList();
532 std::vector<G4Scene::Model>::iterator it 531 std::vector<G4Scene::Model>::iterator itr = vmodel.begin();
533 for(; itr != vmodel.end(); itr++) { 532 for(; itr != vmodel.end(); itr++) {
534 G4cout << " IIIIII model name: " << it 533 G4cout << " IIIIII model name: " << itr->fpModel->GetGlobalTag() << G4endl;
535 } 534 }
536 } 535 }
537 } 536 }
538 } 537 }
539 538
540 539
541 //========== AddPrimitive() functions ======== 540 //========== AddPrimitive() functions ==========//
542 541
543 //----- Add polyline 542 //----- Add polyline
544 void G4GMocrenFileSceneHandler::AddPrimitive ( 543 void G4GMocrenFileSceneHandler::AddPrimitive (const G4Polyline& polyline)
545 { 544 {
546 if(GFDEBUG || G4VisManager::GetVerbosity() > 545 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
547 G4cout << "***** AddPrimitive" << G4endl; 546 G4cout << "***** AddPrimitive" << G4endl;
548 547
549 if (fProcessing2D) { 548 if (fProcessing2D) {
550 static G4bool warned = false; 549 static G4bool warned = false;
551 if (!warned) { 550 if (!warned) {
552 warned = true; 551 warned = true;
553 G4Exception 552 G4Exception
554 ("G4GMocrenFileSceneHandler::AddPrimitive (c 553 ("G4GMocrenFileSceneHandler::AddPrimitive (const G4Polyline&)",
555 "gMocren1001", JustWarning, 554 "gMocren1001", JustWarning,
556 "2D polylines not implemented. Ignored."); 555 "2D polylines not implemented. Ignored.");
557 } 556 }
558 return; 557 return;
559 } 558 }
560 559
561 //----- Initialize if necessary 560 //----- Initialize if necessary
562 GFBeginModeling(); 561 GFBeginModeling();
563 562
564 static G4int numTrajectories = 0; 563 static G4int numTrajectories = 0;
565 if(numTrajectories >= MAX_NUM_TRAJECTORIES) 564 if(numTrajectories >= MAX_NUM_TRAJECTORIES) return;
566 565
567 // draw trajectories 566 // draw trajectories
568 if(kbModelingTrajectory) { 567 if(kbModelingTrajectory) {
569 568
570 G4TrajectoriesModel * pTrModel = dynamic_c 569 G4TrajectoriesModel * pTrModel = dynamic_cast<G4TrajectoriesModel*>(fpModel);
571 if (!pTrModel) { 570 if (!pTrModel) {
572 G4Exception 571 G4Exception
573 ("G4VSceneHandler::AddCompound(const G4Polyl 572 ("G4VSceneHandler::AddCompound(const G4Polyline&)",
574 "gMocren0002", FatalException, "Not a G4Tra 573 "gMocren0002", FatalException, "Not a G4TrajectoriesModel.");
575 } 574 }
576 575
577 G4ThreeVector trans; 576 G4ThreeVector trans;
578 G4RotationMatrix rot; 577 G4RotationMatrix rot;
579 trans = kVolumeTrans3D.getTranslation(); 578 trans = kVolumeTrans3D.getTranslation();
580 rot = kVolumeTrans3D.getRotation().inverse 579 rot = kVolumeTrans3D.getRotation().inverse();
581 580
582 if(GFDEBUG_TRK) G4cout << " trajectory p 581 if(GFDEBUG_TRK) G4cout << " trajectory points : " << G4endl;
583 std::vector<G4float *> trajectory; 582 std::vector<G4float *> trajectory;
584 if(polyline.size() < 2) return; 583 if(polyline.size() < 2) return;
585 G4Polyline::const_iterator preitr = polyli 584 G4Polyline::const_iterator preitr = polyline.begin();
586 G4Polyline::const_iterator postitr = preit 585 G4Polyline::const_iterator postitr = preitr; postitr++;
587 for(; postitr != polyline.end(); preitr++, 586 for(; postitr != polyline.end(); preitr++, postitr++) {
588 G4ThreeVector prePts(preitr->x(), preitr 587 G4ThreeVector prePts(preitr->x(), preitr->y(), preitr->z());
589 prePts -= trans; 588 prePts -= trans;
590 prePts.transform(rot); 589 prePts.transform(rot);
591 G4ThreeVector postPts(postitr->x(), post 590 G4ThreeVector postPts(postitr->x(), postitr->y(), postitr->z());
592 postPts -= trans; 591 postPts -= trans;
593 postPts.transform(rot); 592 postPts.transform(rot);
594 G4float * stepPts = new G4float[6]; 593 G4float * stepPts = new G4float[6];
595 stepPts[0] = prePts.x(); 594 stepPts[0] = prePts.x();
596 stepPts[1] = prePts.y(); 595 stepPts[1] = prePts.y();
597 stepPts[2] = prePts.z(); 596 stepPts[2] = prePts.z();
598 stepPts[3] = postPts.x(); 597 stepPts[3] = postPts.x();
599 stepPts[4] = postPts.y(); 598 stepPts[4] = postPts.y();
600 stepPts[5] = postPts.z(); 599 stepPts[5] = postPts.z();
601 trajectory.push_back(stepPts); 600 trajectory.push_back(stepPts);
602 601
603 if(GFDEBUG_TRK) { 602 if(GFDEBUG_TRK) {
604 G4cout << " (" 603 G4cout << " ("
605 << stepPts[0] << ", " 604 << stepPts[0] << ", "
606 << stepPts[1] << ", " 605 << stepPts[1] << ", "
607 << stepPts[2] << ") - (" 606 << stepPts[2] << ") - ("
608 << stepPts[3] << ", " 607 << stepPts[3] << ", "
609 << stepPts[4] << ", " 608 << stepPts[4] << ", "
610 << stepPts[5] << ")" << G4endl; 609 << stepPts[5] << ")" << G4endl;
611 } 610 }
612 } 611 }
613 612
614 const G4VisAttributes * att = polyline.Get 613 const G4VisAttributes * att = polyline.GetVisAttributes();
615 G4Color color = att->GetColor(); 614 G4Color color = att->GetColor();
616 unsigned char trkcolor[3]; 615 unsigned char trkcolor[3];
617 trkcolor[0] = (unsigned char)(color.GetRed 616 trkcolor[0] = (unsigned char)(color.GetRed()*255);
618 trkcolor[1] = (unsigned char)(color.GetGre 617 trkcolor[1] = (unsigned char)(color.GetGreen()*255);
619 trkcolor[2] = (unsigned char)(color.GetBlu 618 trkcolor[2] = (unsigned char)(color.GetBlue()*255);
620 if(GFDEBUG_TRK) { 619 if(GFDEBUG_TRK) {
621 G4cout << " color : [" 620 G4cout << " color : ["
622 << color.GetRed() << ", " 621 << color.GetRed() << ", "
623 << color.GetGreen() << ", " 622 << color.GetGreen() << ", "
624 << color.GetBlue() << "]" << G4endl; 623 << color.GetBlue() << "]" << G4endl;
625 } 624 }
626 625
627 kgMocrenIO->addTrack(trajectory, trkcolor) 626 kgMocrenIO->addTrack(trajectory, trkcolor);
628 627
629 numTrajectories++; 628 numTrajectories++;
630 } 629 }
631 630
632 } // G4GMocrenFileSceneHandler::AddPrimitive ( 631 } // G4GMocrenFileSceneHandler::AddPrimitive (polyline)
633 632
634 633
635 //----- Add text 634 //----- Add text
636 void G4GMocrenFileSceneHandler::AddPrimitive ( 635 void G4GMocrenFileSceneHandler::AddPrimitive ( const G4Text& text )
637 { 636 {
638 if (fProcessing2D) { 637 if (fProcessing2D) {
639 static G4bool warned = false; 638 static G4bool warned = false;
640 if (!warned) { 639 if (!warned) {
641 warned = true; 640 warned = true;
642 G4Exception 641 G4Exception
643 ("G4GMocrenFileSceneHandler::AddPrimitive (c 642 ("G4GMocrenFileSceneHandler::AddPrimitive (const G4Text&)",
644 "gMocren1002", JustWarning, 643 "gMocren1002", JustWarning,
645 "2D text not implemented. Ignored."); 644 "2D text not implemented. Ignored.");
646 } 645 }
647 return; 646 return;
648 } 647 }
649 648
650 // to avoid a warning in the compile process 649 // to avoid a warning in the compile process
651 G4Text dummytext = text; 650 G4Text dummytext = text;
652 651
653 //----- 652 //-----
654 if(GFDEBUG || G4VisManager::GetVerbosity() > 653 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
655 G4cout << "***** AddPrimitive( G4Text )" < 654 G4cout << "***** AddPrimitive( G4Text )" << G4endl;
656 655
657 //----- Initialize IF NECESSARY 656 //----- Initialize IF NECESSARY
658 GFBeginModeling(); 657 GFBeginModeling();
659 658
660 } // G4GMocrenFileSceneHandler::AddPrimitive ( 659 } // G4GMocrenFileSceneHandler::AddPrimitive ( text )
661 660
662 661
663 //----- Add circle 662 //----- Add circle
664 void G4GMocrenFileSceneHandler::AddPrimitive ( 663 void G4GMocrenFileSceneHandler::AddPrimitive ( const G4Circle& mark_circle )
665 { 664 {
666 // to avoid a warning in the compile process 665 // to avoid a warning in the compile process
667 G4Circle dummycircle = mark_circle; 666 G4Circle dummycircle = mark_circle;
668 667
669 if (fProcessing2D) { 668 if (fProcessing2D) {
670 static G4bool warned = false; 669 static G4bool warned = false;
671 if (!warned) { 670 if (!warned) {
672 warned = true; 671 warned = true;
673 G4Exception 672 G4Exception
674 ("G4GMocrenFileSceneHandler::AddPrimitive (c 673 ("G4GMocrenFileSceneHandler::AddPrimitive (const G4Circle&)",
675 "gMocren1003", JustWarning, 674 "gMocren1003", JustWarning,
676 "2D circles not implemented. Ignored."); 675 "2D circles not implemented. Ignored.");
677 } 676 }
678 return; 677 return;
679 } 678 }
680 679
681 //----- 680 //-----
682 if(GFDEBUG || G4VisManager::GetVerbosity() > 681 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
683 G4cout << "***** AddPrimitive( G4Circle )" 682 G4cout << "***** AddPrimitive( G4Circle )" << G4endl;
684 683
685 //----- Initialize IF NECESSARY 684 //----- Initialize IF NECESSARY
686 GFBeginModeling(); 685 GFBeginModeling();
687 686
688 687
689 } // G4GMocrenFileSceneHandler::AddPrimitive ( 688 } // G4GMocrenFileSceneHandler::AddPrimitive ( mark_circle )
690 689
691 690
692 //----- Add square 691 //----- Add square
693 void G4GMocrenFileSceneHandler::AddPrimitive ( 692 void G4GMocrenFileSceneHandler::AddPrimitive (const G4Square& mark_square )
694 { 693 {
695 // to avoid a warning in the compile process 694 // to avoid a warning in the compile process
696 G4Square dummysquare = mark_square; 695 G4Square dummysquare = mark_square;
697 696
698 if (fProcessing2D) { 697 if (fProcessing2D) {
699 static G4bool warned = false; 698 static G4bool warned = false;
700 if (!warned) { 699 if (!warned) {
701 warned = true; 700 warned = true;
702 G4Exception 701 G4Exception
703 ("G4GMocrenFileSceneHandler::AddPrimitive (c 702 ("G4GMocrenFileSceneHandler::AddPrimitive (const G4Square&)",
704 "gMocren1004", JustWarning, 703 "gMocren1004", JustWarning,
705 "2D squares not implemented. Ignored."); 704 "2D squares not implemented. Ignored.");
706 } 705 }
707 return; 706 return;
708 } 707 }
709 708
710 //----- 709 //-----
711 if(GFDEBUG || G4VisManager::GetVerbosity() > 710 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
712 G4cout << "***** AddPrimitive( G4Square )" 711 G4cout << "***** AddPrimitive( G4Square )" << G4endl;
713 712
714 //----- Initialize if necessary 713 //----- Initialize if necessary
715 GFBeginModeling(); 714 GFBeginModeling();
716 715
717 } // G4GMocrenFileSceneHandler::AddPrimitive ( 716 } // G4GMocrenFileSceneHandler::AddPrimitive ( mark_square )
718 717
719 718
720 //----- Add polyhedron 719 //----- Add polyhedron
721 void G4GMocrenFileSceneHandler::AddPrimitive ( 720 void G4GMocrenFileSceneHandler::AddPrimitive ( const G4Polyhedron& polyhedron )
722 { 721 {
723 //----- 722 //-----
724 if(GFDEBUG || G4VisManager::GetVerbosity() > 723 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
725 G4cout << "***** AddPrimitive( G4Polyhedro 724 G4cout << "***** AddPrimitive( G4Polyhedron )" << G4endl;
726 725
727 726
728 if (polyhedron.GetNoFacets() == 0) return; 727 if (polyhedron.GetNoFacets() == 0) return;
729 728
730 if (fProcessing2D) { 729 if (fProcessing2D) {
731 static G4bool warned = false; 730 static G4bool warned = false;
732 if (!warned) { 731 if (!warned) {
733 warned = true; 732 warned = true;
734 G4Exception 733 G4Exception
735 ("G4GMocrenFileSceneHandler::AddPrimitive (c 734 ("G4GMocrenFileSceneHandler::AddPrimitive (const G4Polyhedron&)",
736 "gMocren1005", JustWarning, 735 "gMocren1005", JustWarning,
737 "2D polyhedra not implemented. Ignored."); 736 "2D polyhedra not implemented. Ignored.");
738 } 737 }
739 return; 738 return;
740 } 739 }
741 740
742 //----- Initialize if necessary 741 //----- Initialize if necessary
743 GFBeginModeling(); 742 GFBeginModeling();
744 743
745 //---------- (3) Facet block 744 //---------- (3) Facet block
746 for (G4int f = polyhedron.GetNoFacets(); f; 745 for (G4int f = polyhedron.GetNoFacets(); f; f--){
747 G4bool notLastEdge = true; 746 G4bool notLastEdge = true;
748 G4int index = -1; // initialization 747 G4int index = -1; // initialization
749 G4int edgeFlag = 1; 748 G4int edgeFlag = 1;
750 //G4int preedgeFlag = 1; 749 //G4int preedgeFlag = 1;
751 //G4int work[4], i = 0; 750 //G4int work[4], i = 0;
752 G4int i = 0; 751 G4int i = 0;
753 do { 752 do {
754 //preedgeFlag = edgeFlag; 753 //preedgeFlag = edgeFlag;
755 notLastEdge = polyhedron.GetNextVertexIn 754 notLastEdge = polyhedron.GetNextVertexIndex(index, edgeFlag);
756 //work[i++] = index; 755 //work[i++] = index;
757 i++; 756 i++;
758 }while (notLastEdge); 757 }while (notLastEdge);
759 switch (i){ 758 switch (i){
760 case 3: 759 case 3:
761 //SendStrInt3(FR_FACET, work[0], work[1] 760 //SendStrInt3(FR_FACET, work[0], work[1], work[2] );
762 break; 761 break;
763 case 4: 762 case 4:
764 //SendStrInt4(FR_FACET, work[0], work[1] 763 //SendStrInt4(FR_FACET, work[0], work[1], work[2], work[3] );
765 break; 764 break;
766 default: 765 default:
767 if(GFDEBUG || G4VisManager::GetVerbosity 766 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
768 G4cout << 767 G4cout <<
769 "ERROR G4GMocrenFileSceneHandler::AddPrimi 768 "ERROR G4GMocrenFileSceneHandler::AddPrimitive(G4Polyhedron)" << G4endl;
770 G4PhysicalVolumeModel* pPVModel = 769 G4PhysicalVolumeModel* pPVModel =
771 dynamic_cast<G4PhysicalVolumeModel*>(f 770 dynamic_cast<G4PhysicalVolumeModel*>(fpModel);
772 if (pPVModel) 771 if (pPVModel)
773 if(G4VisManager::GetVerbosity() >= G4VisMana 772 if(G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
774 G4cout << "Volume " << pPVModel->GetCurren 773 G4cout << "Volume " << pPVModel->GetCurrentPV()->GetName() <<
775 ", Solid " << pPVModel->GetCurrentLV()-> 774 ", Solid " << pPVModel->GetCurrentLV()->GetSolid()->GetName() <<
776 " (" << pPVModel->GetCurrentLV()->GetSol 775 " (" << pPVModel->GetCurrentLV()->GetSolid()->GetEntityType();
777 776
778 if(G4VisManager::GetVerbosity() >= G4Vis 777 if(G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
779 G4cout << 778 G4cout <<
780 "\nG4Polyhedron facet with " << i << " edg 779 "\nG4Polyhedron facet with " << i << " edges" << G4endl;
781 } 780 }
782 } 781 }
783 782
784 } // G4GMocrenFileSceneHandler::AddPrimitive ( 783 } // G4GMocrenFileSceneHandler::AddPrimitive (polyhedron)
785 784
786 785
787 //----- 786 //-----
788 void G4GMocrenFileSceneHandler::GFEndModeling 787 void G4GMocrenFileSceneHandler::GFEndModeling ()
789 { 788 {
790 G4VSceneHandler::EndModeling(); 789 G4VSceneHandler::EndModeling();
791 790
792 //----- 791 //-----
793 if(GFDEBUG || G4VisManager::GetVerbosity() > 792 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
794 G4cout << "***** GFEndModeling (called)" < 793 G4cout << "***** GFEndModeling (called)" << G4endl;
795 794
796 if( GFIsInModeling() ) { 795 if( GFIsInModeling() ) {
797 796
798 if(GFDEBUG || G4VisManager::GetVerbosity() 797 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations) {
799 G4cout << "***** GFEndModeling (started) 798 G4cout << "***** GFEndModeling (started) " ;
800 G4cout << "(/EndModeling, /DrawAll, /Clo 799 G4cout << "(/EndModeling, /DrawAll, /CloseDevice)" << G4endl;
801 } 800 }
802 801
803 //----- End saving data to g4.gdd 802 //----- End saving data to g4.gdd
804 EndSavingGdd() ; 803 EndSavingGdd() ;
805 804
806 //------ Reset flag 805 //------ Reset flag
807 kFlagInModeling = false ; 806 kFlagInModeling = false ;
808 807
809 } 808 }
810 809
811 } 810 }
812 811
813 812
814 //----- 813 //-----
815 void G4GMocrenFileSceneHandler::BeginPrimitive 814 void G4GMocrenFileSceneHandler::BeginPrimitives (const G4Transform3D& objectTransformation)
816 { 815 {
817 if(GFDEBUG || G4VisManager::GetVerbosity() > 816 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
818 G4cout << "***** BeginPrimitives " << G4en 817 G4cout << "***** BeginPrimitives " << G4endl;
819 818
820 GFBeginModeling(); 819 GFBeginModeling();
821 820
822 G4VSceneHandler::BeginPrimitives (objectTran 821 G4VSceneHandler::BeginPrimitives (objectTransformation);
823 822
824 } 823 }
825 824
826 825
827 //----- 826 //-----
828 void G4GMocrenFileSceneHandler::EndPrimitives 827 void G4GMocrenFileSceneHandler::EndPrimitives ()
829 { 828 {
830 if(GFDEBUG || G4VisManager::GetVerbosity() > 829 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
831 G4cout << "***** EndPrimitives " << G4endl 830 G4cout << "***** EndPrimitives " << G4endl;
832 831
833 G4VSceneHandler::EndPrimitives (); 832 G4VSceneHandler::EndPrimitives ();
834 } 833 }
835 834
836 835
837 //========== AddSolid() functions ==========// 836 //========== AddSolid() functions ==========//
838 837
839 //----- Add box 838 //----- Add box
840 void G4GMocrenFileSceneHandler::AddSolid( cons 839 void G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )
841 { 840 {
842 if(GFDEBUG || G4VisManager::GetVerbosity() > 841 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
843 G4cout << "***** AddSolid ( box )" << G4en 842 G4cout << "***** AddSolid ( box )" << G4endl;
844 843
845 if(GFDEBUG_DET > 0) 844 if(GFDEBUG_DET > 0)
846 G4cout << "G4GMocrenFileSceneHandler::AddS 845 G4cout << "G4GMocrenFileSceneHandler::AddSolid(const G4Box&) : "
847 << box.GetName() << G4endl; 846 << box.GetName() << G4endl;
848 847
849 //----- skip drawing invisible primitive 848 //----- skip drawing invisible primitive
850 if( !IsVisible() ) { return ; } 849 if( !IsVisible() ) { return ; }
851 850
852 //----- Initialize if necessary 851 //----- Initialize if necessary
853 GFBeginModeling(); 852 GFBeginModeling();
854 853
855 854
856 //-- 855 //--
857 if(GFDEBUG_DET > 1) { 856 if(GFDEBUG_DET > 1) {
858 G4cout << "-------" << G4endl; 857 G4cout << "-------" << G4endl;
859 G4cout << " " << box.GetName() << G4end 858 G4cout << " " << box.GetName() << G4endl;
860 G4Polyhedron * poly = box.CreatePolyhedron 859 G4Polyhedron * poly = box.CreatePolyhedron();
861 poly->Transform(fObjectTransformation); 860 poly->Transform(fObjectTransformation);
862 //G4int nv = poly->GetNoVertices(); 861 //G4int nv = poly->GetNoVertices();
863 G4Point3D v1, v2; 862 G4Point3D v1, v2;
864 G4int next; 863 G4int next;
865 //while(1) { // next flag isn't functional 864 //while(1) { // next flag isn't functional.
866 for(G4int i = 0; i < 12; i++) { // # of ed 865 for(G4int i = 0; i < 12; i++) { // # of edges is 12.
867 poly->GetNextEdge(v1, v2, next); 866 poly->GetNextEdge(v1, v2, next);
868 if(next == 0) break; 867 if(next == 0) break;
869 G4cout << " (" << v1.x() << ", " 868 G4cout << " (" << v1.x() << ", "
870 << v1.y() << ", " 869 << v1.y() << ", "
871 << v1.z() << ") - (" 870 << v1.z() << ") - ("
872 << v2.x() << ", " 871 << v2.x() << ", "
873 << v2.y() << ", " 872 << v2.y() << ", "
874 << v2.z() << ") [" << next << "]" 873 << v2.z() << ") [" << next << "]"
875 << G4endl; 874 << G4endl;
876 } 875 }
877 delete poly; 876 delete poly;
878 } 877 }
879 878
880 879
881 // the volume name set by /vis/gMocren/setVo 880 // the volume name set by /vis/gMocren/setVolumeName
882 G4String volName = kMessenger.getVolumeName( 881 G4String volName = kMessenger.getVolumeName();
883 882
884 883
885 if(kFlagParameterization != 2) { 884 if(kFlagParameterization != 2) {
886 G4ScoringManager * pScrMan = G4ScoringMana 885 G4ScoringManager * pScrMan = G4ScoringManager::GetScoringManager();
887 if(pScrMan) { 886 if(pScrMan) {
888 G4ScoringBox * pScBox = dynamic_cast<G4S 887 G4ScoringBox * pScBox = dynamic_cast<G4ScoringBox*>(pScrMan->FindMesh(volName));
889 G4bool bMesh = false; 888 G4bool bMesh = false;
890 if(pScBox != NULL) bMesh = true; 889 if(pScBox != NULL) bMesh = true;
891 if(bMesh) kFlagParameterization = 2; 890 if(bMesh) kFlagParameterization = 2;
892 if(GFDEBUG_DET > 0) G4cout << " G4Scor 891 if(GFDEBUG_DET > 0) G4cout << " G4ScoringManager::FindMesh() : "
893 << volName << " - " << bMesh << G4endl 892 << volName << " - " << bMesh << G4endl;
894 } 893 }
895 } 894 }
896 895
897 const G4VModel* pv_model = GetModel(); 896 const G4VModel* pv_model = GetModel();
898 if (!pv_model) { return ; } 897 if (!pv_model) { return ; }
899 G4PhysicalVolumeModel* pPVModel = 898 G4PhysicalVolumeModel* pPVModel =
900 dynamic_cast<G4PhysicalVolumeModel*>(fpModel 899 dynamic_cast<G4PhysicalVolumeModel*>(fpModel);
901 if (!pPVModel) { return ; } 900 if (!pPVModel) { return ; }
902 901
903 902
904 //-- debug information 903 //-- debug information
905 if(GFDEBUG_DET > 0) { 904 if(GFDEBUG_DET > 0) {
906 G4Material * mat = pPVModel->GetCurrentMat 905 G4Material * mat = pPVModel->GetCurrentMaterial();
907 G4String name = mat->GetName(); 906 G4String name = mat->GetName();
908 G4double dens = mat->GetDensity()/(g/cm3); 907 G4double dens = mat->GetDensity()/(g/cm3);
909 G4int copyNo = pPVModel->GetCurrentPV()->G 908 G4int copyNo = pPVModel->GetCurrentPV()->GetCopyNo();
910 G4int depth = pPVModel->GetCurrentDepth(); 909 G4int depth = pPVModel->GetCurrentDepth();
911 G4cout << " copy no.: " << copyNo << G4 910 G4cout << " copy no.: " << copyNo << G4endl;
912 G4cout << " depth : " << depth << G4e 911 G4cout << " depth : " << depth << G4endl;
913 G4cout << " density : " << dens << " [g 912 G4cout << " density : " << dens << " [g/cm3]" << G4endl;
914 G4cout << " location: " << pPVModel->Ge 913 G4cout << " location: " << pPVModel->GetCurrentPV()->GetObjectTranslation() << G4endl;
915 G4cout << " Multiplicity : " << 914 G4cout << " Multiplicity : " << pPVModel->GetCurrentPV()->GetMultiplicity() << G4endl;
916 G4cout << " Is replicated? : " << 915 G4cout << " Is replicated? : " << pPVModel->GetCurrentPV()->IsReplicated() << G4endl;
917 G4cout << " Is parameterised? : " << 916 G4cout << " Is parameterised? : " << pPVModel->GetCurrentPV()->IsParameterised() << G4endl;
918 G4cout << " top phys. vol. name : " << 917 G4cout << " top phys. vol. name : " << pPVModel->GetTopPhysicalVolume()->GetName() << G4endl;
919 } 918 }
920 919
921 //-- check the parameterised volume 920 //-- check the parameterised volume
922 if(box.GetName() == volName) { 921 if(box.GetName() == volName) {
923 922
924 kVolumeTrans3D = fObjectTransformation; 923 kVolumeTrans3D = fObjectTransformation;
925 // coordination system correction for gMoc 924 // coordination system correction for gMocren
926 G4ThreeVector raxis(1., 0., 0.), dummy(0., 925 G4ThreeVector raxis(1., 0., 0.), dummy(0.,0.,0.);
927 G4RotationMatrix rot(raxis, pi*rad); 926 G4RotationMatrix rot(raxis, pi*rad);
928 G4Transform3D trot(rot, dummy); 927 G4Transform3D trot(rot, dummy);
929 if(GFDEBUG_DET) { 928 if(GFDEBUG_DET) {
930 G4ThreeVector trans1 = kVolumeTrans3D.ge 929 G4ThreeVector trans1 = kVolumeTrans3D.getTranslation();
931 G4RotationMatrix rot1 = kVolumeTrans3D.g 930 G4RotationMatrix rot1 = kVolumeTrans3D.getRotation().inverse();
932 G4cout << "kVolumeTrans3D: " << trans1 < 931 G4cout << "kVolumeTrans3D: " << trans1 << G4endl << rot1 << G4endl;
933 } 932 }
934 kVolumeTrans3D = kVolumeTrans3D*trot; 933 kVolumeTrans3D = kVolumeTrans3D*trot;
935 if(GFDEBUG_DET) G4cout << " Parameterised 934 if(GFDEBUG_DET) G4cout << " Parameterised volume : " << box.GetName() << G4endl;
936 935
937 936
938 937
939 // 938 //
940 G4VPhysicalVolume * pv[3] = {0,0,0}; 939 G4VPhysicalVolume * pv[3] = {0,0,0};
941 pv[0] = pPVModel->GetCurrentPV()->GetLogic 940 pv[0] = pPVModel->GetCurrentPV()->GetLogicalVolume()->GetDaughter(0);
942 if(!pv[0]) { 941 if(!pv[0]) {
943 G4Exception("G4GMocrenFileSceneHandler:: 942 G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
944 "gMocren0003", FatalExceptio 943 "gMocren0003", FatalException, "Unexpected volume.");
945 } 944 }
946 G4int dirAxis[3] = {-1,-1,-1}; 945 G4int dirAxis[3] = {-1,-1,-1};
947 G4int nDaughters[3] = {0,0,0}; 946 G4int nDaughters[3] = {0,0,0};
948 947
949 EAxis axis; G4int nReplicas; G4double widt 948 EAxis axis; G4int nReplicas; G4double width; G4double offset; G4bool consuming;
950 pv[0]->GetReplicationData(axis, nReplicas, 949 pv[0]->GetReplicationData(axis, nReplicas, width, offset, consuming);
951 nDaughters[0] = nReplicas; 950 nDaughters[0] = nReplicas;
952 switch(axis) { 951 switch(axis) {
953 case kXAxis: dirAxis[0] = 0; break; 952 case kXAxis: dirAxis[0] = 0; break;
954 case kYAxis: dirAxis[0] = 1; break; 953 case kYAxis: dirAxis[0] = 1; break;
955 case kZAxis: dirAxis[0] = 2; break; 954 case kZAxis: dirAxis[0] = 2; break;
956 default: 955 default:
957 G4Exception("G4GMocrenFileSceneHandler 956 G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
958 "gMocren0004", FatalExcept 957 "gMocren0004", FatalException, "Error.");
959 } 958 }
960 kNestedVolumeNames.push_back(pv[0]->GetNam 959 kNestedVolumeNames.push_back(pv[0]->GetName());
961 if(GFDEBUG_DET) 960 if(GFDEBUG_DET)
962 G4cout << " daughter name : " << 961 G4cout << " daughter name : " << pv[0]->GetName()
963 << " # : " << nDaughters[0] << G4endl 962 << " # : " << nDaughters[0] << G4endl;
964 963
965 // 964 //
966 if(GFDEBUG_DET) { 965 if(GFDEBUG_DET) {
967 if(pv[0]->GetLogicalVolume()->GetNoDaugh 966 if(pv[0]->GetLogicalVolume()->GetNoDaughters()) {
968 G4cout << "# of daughters : " 967 G4cout << "# of daughters : "
969 << pv[0]->GetLogicalVolume()->GetNoDa 968 << pv[0]->GetLogicalVolume()->GetNoDaughters() << G4endl;
970 } else { 969 } else {
971 //G4Exception("G4GMocrenFileSceneHandl 970 //G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
972 // "gMocren0005", FatalException, 971 // "gMocren0005", FatalException, "Error.");
973 } 972 }
974 } 973 }
975 974
976 // check whether nested or regular paramet 975 // check whether nested or regular parameterization
977 if(GFDEBUG_DET) G4cout << "# of daughters 976 if(GFDEBUG_DET) G4cout << "# of daughters : "
978 << pv[0]->GetLogicalVolume()->GetNoDa 977 << pv[0]->GetLogicalVolume()->GetNoDaughters() << G4endl;
979 if(pv[0]->GetLogicalVolume()->GetNoDaughte 978 if(pv[0]->GetLogicalVolume()->GetNoDaughters() == 0) {
980 kFlagParameterization = 1; 979 kFlagParameterization = 1;
981 //G4Exception("G4GMocrenFileSceneHandler 980 //G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
982 // "gMocren0006", FatalException, " 981 // "gMocren0006", FatalException, "Error.");
983 } 982 }
984 983
985 if(kFlagParameterization == 0) { 984 if(kFlagParameterization == 0) {
986 985
987 pv[1] = pv[0]->GetLogicalVolume()->GetDa 986 pv[1] = pv[0]->GetLogicalVolume()->GetDaughter(0);
988 if(pv[1]) { 987 if(pv[1]) {
989 pv[1]->GetReplicationData(axis, nRepli 988 pv[1]->GetReplicationData(axis, nReplicas, width, offset, consuming);
990 nDaughters[1] = nReplicas; 989 nDaughters[1] = nReplicas;
991 switch(axis) { 990 switch(axis) {
992 case kXAxis: dirAxis[1] = 0; break; 991 case kXAxis: dirAxis[1] = 0; break;
993 case kYAxis: dirAxis[1] = 1; break; 992 case kYAxis: dirAxis[1] = 1; break;
994 case kZAxis: dirAxis[1] = 2; break; 993 case kZAxis: dirAxis[1] = 2; break;
995 default: 994 default:
996 G4Exception("G4GMocrenFileSceneHan 995 G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
997 "gMocren0007", FatalEx 996 "gMocren0007", FatalException, "Error.");
998 } 997 }
999 kNestedVolumeNames.push_back(pv[1]->Ge 998 kNestedVolumeNames.push_back(pv[1]->GetName());
1000 if(GFDEBUG_DET) 999 if(GFDEBUG_DET)
1001 G4cout << " sub-daughter nam 1000 G4cout << " sub-daughter name : " << pv[1]->GetName()
1002 << " # : " << nDaughters[1]<< G4e 1001 << " # : " << nDaughters[1]<< G4endl;
1003 1002
1004 // 1003 //
1005 pv[2] = pv[1]->GetLogicalVolume()->Ge 1004 pv[2] = pv[1]->GetLogicalVolume()->GetDaughter(0);
1006 if(pv[2]) { 1005 if(pv[2]) {
1007 nDaughters[2] = pv[2]->GetMultiplic 1006 nDaughters[2] = pv[2]->GetMultiplicity();
1008 kNestedVolumeNames.push_back(pv[2]- 1007 kNestedVolumeNames.push_back(pv[2]->GetName());
1009 if(GFDEBUG_DET) 1008 if(GFDEBUG_DET)
1010 G4cout << " sub-sub-daught 1009 G4cout << " sub-sub-daughter name : " << pv[2]->GetName()
1011 << " # : " << nDaughters[2] << 1010 << " # : " << nDaughters[2] << G4endl;
1012 1011
1013 if(nDaughters[2] > 1) { 1012 if(nDaughters[2] > 1) {
1014 G4VNestedParameterisation * nestP 1013 G4VNestedParameterisation * nestPara
1015 = dynamic_cast<G4VNestedParameter 1014 = dynamic_cast<G4VNestedParameterisation*>(pv[2]->GetParameterisation());
1016 if(nestPara == NULL) 1015 if(nestPara == NULL)
1017 G4Exception("G4GMocrenFileScene 1016 G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
1018 "gMocren0008", Fata 1017 "gMocren0008", FatalException, "Non-nested parameterisation");
1019 1018
1020 nestPara->ComputeTransformation(0 1019 nestPara->ComputeTransformation(0, pv[2]);
1021 G4ThreeVector trans0 = pv[2]->Get 1020 G4ThreeVector trans0 = pv[2]->GetObjectTranslation();
1022 nestPara->ComputeTransformation(1 1021 nestPara->ComputeTransformation(1, pv[2]);
1023 G4ThreeVector trans1 = pv[2]->Get 1022 G4ThreeVector trans1 = pv[2]->GetObjectTranslation();
1024 G4ThreeVector diff(trans0 - trans 1023 G4ThreeVector diff(trans0 - trans1);
1025 if(GFDEBUG_DET) 1024 if(GFDEBUG_DET)
1026 G4cout << trans0 << " - " << tr 1025 G4cout << trans0 << " - " << trans1 << " - " << diff << G4endl;
1027 1026
1028 if(diff.x() != 0.) dirAxis[2] = 0 1027 if(diff.x() != 0.) dirAxis[2] = 0;
1029 else if(diff.y() != 0.) dirAxis[2 1028 else if(diff.y() != 0.) dirAxis[2] = 1;
1030 else if(diff.z() != 0.) dirAxis[2 1029 else if(diff.z() != 0.) dirAxis[2] = 2;
1031 else 1030 else
1032 G4Exception("G4GMocrenFileScene 1031 G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
1033 "gMocren0009", Fata 1032 "gMocren0009", FatalException, "Unexpected nested parameterisation");
1034 } 1033 }
1035 } 1034 }
1036 } 1035 }
1037 1036
1038 for(G4int i = 0; i < 3; i++) { 1037 for(G4int i = 0; i < 3; i++) {
1039 kNestedVolumeDimension[i] = nDaughter 1038 kNestedVolumeDimension[i] = nDaughters[i];
1040 //kNestedVolumeDimension[i] = nDaught 1039 //kNestedVolumeDimension[i] = nDaughters[dirAxis[i]];
1041 kNestedVolumeDirAxis[i] = dirAxis[i]; 1040 kNestedVolumeDirAxis[i] = dirAxis[i];
1042 } 1041 }
1043 //G4cout << "@@@@@@@@@ " 1042 //G4cout << "@@@@@@@@@ "
1044 // << dirAxis[0] << ", " << dirAx 1043 // << dirAxis[0] << ", " << dirAxis[1] << ", " << dirAxis[2] << G4endl;
1045 1044
1046 // get densities 1045 // get densities
1047 G4VNestedParameterisation * nestPara 1046 G4VNestedParameterisation * nestPara
1048 = dynamic_cast<G4VNestedParameterisatio 1047 = dynamic_cast<G4VNestedParameterisation*>(pv[2]->GetParameterisation());
1049 if(nestPara != NULL) { 1048 if(nestPara != NULL) {
1050 G4double prexyz[3] = {0.,0.,0.}, xyz[ 1049 G4double prexyz[3] = {0.,0.,0.}, xyz[3] = {0.,0.,0.};
1051 for(G4int n0 = 0; n0 < nDaughters[0]; 1050 for(G4int n0 = 0; n0 < nDaughters[0]; n0++) {
1052 for(G4int n1 = 0; n1 < nDaughters[1 1051 for(G4int n1 = 0; n1 < nDaughters[1]; n1++) {
1053 for(G4int n2 = 0; n2 < nDaughters 1052 for(G4int n2 = 0; n2 < nDaughters[2]; n2++) {
1054 1053
1055 G4GMocrenTouchable * touch = ne 1054 G4GMocrenTouchable * touch = new G4GMocrenTouchable(n1, n0);
1056 if(GFDEBUG_DET) 1055 if(GFDEBUG_DET)
1057 G4cout << " retrieve volume 1056 G4cout << " retrieve volume : copy # : " << n0
1058 << ", " << n1 << ", " << n2 < 1057 << ", " << n1 << ", " << n2 << G4endl;
1059 G4Material * mat = nestPara->Co 1058 G4Material * mat = nestPara->ComputeMaterial(pv[2], n2, touch);
1060 delete touch; 1059 delete touch;
1061 G4double dens = mat->GetDensity 1060 G4double dens = mat->GetDensity()/(g/cm3);
1062 1061
1063 if(GFDEBUG_DET) 1062 if(GFDEBUG_DET)
1064 G4cout << " density 1063 G4cout << " density :" << dens << " [g/cm3]" << G4endl;
1065 1064
1066 G4Box tbox(box); 1065 G4Box tbox(box);
1067 nestPara->ComputeDimensions(tbo 1066 nestPara->ComputeDimensions(tbox, n2, pv[2]);
1068 xyz[0] = tbox.GetXHalfLength()/ 1067 xyz[0] = tbox.GetXHalfLength()/mm;
1069 xyz[1] = tbox.GetYHalfLength()/ 1068 xyz[1] = tbox.GetYHalfLength()/mm;
1070 xyz[2] = tbox.GetZHalfLength()/ 1069 xyz[2] = tbox.GetZHalfLength()/mm;
1071 if(n0 != 0 || n1 != 0 || n2 != 1070 if(n0 != 0 || n1 != 0 || n2 != 0) {
1072 for(G4int i = 0; i < 3; i++) 1071 for(G4int i = 0; i < 3; i++) {
1073 if(xyz[i] != prexyz[i]) 1072 if(xyz[i] != prexyz[i])
1074 G4Exception("G4GMocrenFil 1073 G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
1075 "gMocren0010" 1074 "gMocren0010", FatalException, "Unsupported parameterisation");
1076 } 1075 }
1077 } 1076 }
1078 if(GFDEBUG_DET) 1077 if(GFDEBUG_DET)
1079 G4cout << " size 1078 G4cout << " size : " << tbox.GetXHalfLength()/mm << " x "
1080 << tbox.GetYHalfLength()/mm < 1079 << tbox.GetYHalfLength()/mm << " x "
1081 << tbox.GetZHalfLength()/mm < 1080 << tbox.GetZHalfLength()/mm << " [mm3]" << G4endl;
1082 1081
1083 G4int idx[3]; 1082 G4int idx[3];
1084 idx[dirAxis[0]] = n0; 1083 idx[dirAxis[0]] = n0;
1085 idx[dirAxis[1]] = n1; 1084 idx[dirAxis[1]] = n1;
1086 idx[dirAxis[2]] = n2; 1085 idx[dirAxis[2]] = n2;
1087 Index3D i3d(idx[0],idx[1],idx[2 1086 Index3D i3d(idx[0],idx[1],idx[2]);
1088 kNestedModality[i3d] = dens; 1087 kNestedModality[i3d] = dens;
1089 if(GFDEBUG_DET) 1088 if(GFDEBUG_DET)
1090 G4cout << " index: " << idx[0 1089 G4cout << " index: " << idx[0] << ", " << idx[1] << ", " << idx[2]
1091 << " density: " << dens << G 1090 << " density: " << dens << G4endl;
1092 1091
1093 for(G4int i = 0; i < 3; i++) pr 1092 for(G4int i = 0; i < 3; i++) prexyz[i] = xyz[i];
1094 } 1093 }
1095 } 1094 }
1096 } 1095 }
1097 1096
1098 kVolumeSize.set(box.GetXHalfLength()* 1097 kVolumeSize.set(box.GetXHalfLength()*2/mm,
1099 box.GetYHalfLength()* 1098 box.GetYHalfLength()*2/mm,
1100 box.GetZHalfLength()* 1099 box.GetZHalfLength()*2/mm);
1101 // mesh size 1100 // mesh size
1102 if(!kbSetModalityVoxelSize) { 1101 if(!kbSetModalityVoxelSize) {
1103 G4float spacing[3] = {static_cast<G 1102 G4float spacing[3] = {static_cast<G4float>(2*xyz[0]),
1104 static_cast<G4float>(2*xyz[1]), 1103 static_cast<G4float>(2*xyz[1]),
1105 static_cast<G4float>(2*xyz[2])}; 1104 static_cast<G4float>(2*xyz[2])};
1106 kgMocrenIO->setVoxelSpacing(spacing 1105 kgMocrenIO->setVoxelSpacing(spacing);
1107 kVoxelDimension.set(spacing[0], spa 1106 kVoxelDimension.set(spacing[0], spacing[1], spacing[2]);
1108 kbSetModalityVoxelSize = true; 1107 kbSetModalityVoxelSize = true;
1109 } 1108 }
1110 1109
1111 } else { 1110 } else {
1112 if(GFDEBUG_DET) 1111 if(GFDEBUG_DET)
1113 G4cout << pv[2]->GetName() << G4end 1112 G4cout << pv[2]->GetName() << G4endl;
1114 G4Exception("G4GMocrenFileSceneHandle 1113 G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
1115 "gMocren0011", FatalExcep 1114 "gMocren0011", FatalException, "Non-nested parameterisation");
1116 } 1115 }
1117 1116
1118 1117
1119 1118
1120 //-- debug 1119 //-- debug
1121 if(GFDEBUG_DET > 1) { 1120 if(GFDEBUG_DET > 1) {
1122 if(pPVModel->GetCurrentPV()->IsParame 1121 if(pPVModel->GetCurrentPV()->IsParameterised()) {
1123 G4VPVParameterisation * para = pPVM 1122 G4VPVParameterisation * para = pPVModel->GetCurrentPV()->GetParameterisation();
1124 G4cout << " Is nested parameterisat 1123 G4cout << " Is nested parameterisation? : " << para->IsNested() << G4endl;
1125 1124
1126 1125
1127 G4int npvp = pPVModel->GetDrawnPVPa 1126 G4int npvp = pPVModel->GetDrawnPVPath().size();
1128 G4cout << " physical volume nod 1127 G4cout << " physical volume node id : "
1129 << "size: " << npvp << ", PV name: 1128 << "size: " << npvp << ", PV name: ";
1130 for(G4int i = 0; i < npvp; i++) { 1129 for(G4int i = 0; i < npvp; i++) {
1131 G4cout << pPVModel->GetDrawnPVPat 1130 G4cout << pPVModel->GetDrawnPVPath()[i].GetPhysicalVolume()->GetName()
1132 << " [param:" 1131 << " [param:"
1133 << pPVModel->GetDrawnPVPath()[i]. 1132 << pPVModel->GetDrawnPVPath()[i].GetPhysicalVolume()->IsParameterised()
1134 << ",rep:" 1133 << ",rep:"
1135 << pPVModel->GetDrawnPVPath()[i]. 1134 << pPVModel->GetDrawnPVPath()[i].GetPhysicalVolume()->IsReplicated();
1136 if(pPVModel->GetDrawnPVPath()[i]. 1135 if(pPVModel->GetDrawnPVPath()[i].GetPhysicalVolume()->GetParameterisation()) {
1137 G4cout << ",nest:" 1136 G4cout << ",nest:"
1138 << pPVModel->GetDrawnPVPath()[i 1137 << pPVModel->GetDrawnPVPath()[i].GetPhysicalVolume()->GetParameterisation()->IsNested();
1139 } 1138 }
1140 G4cout << ",copyno:" 1139 G4cout << ",copyno:"
1141 << pPVModel->GetDrawnPVPath()[i]. 1140 << pPVModel->GetDrawnPVPath()[i].GetPhysicalVolume()->GetCopyNo();
1142 G4cout << "] - "; 1141 G4cout << "] - ";
1143 } 1142 }
1144 G4cout << G4endl; 1143 G4cout << G4endl;
1145 1144
1146 1145
1147 pPVModel->GetCurrentPV()->GetReplic 1146 pPVModel->GetCurrentPV()->GetReplicationData(axis, nReplicas, width, offset, consuming);
1148 G4cout << " # replicas : " << n 1147 G4cout << " # replicas : " << nReplicas << G4endl;
1149 G4double pareDims[3] = {0.,0.,0.}; 1148 G4double pareDims[3] = {0.,0.,0.};
1150 G4Box * pbox = dynamic_cast<G4Box * 1149 G4Box * pbox = dynamic_cast<G4Box *>(pPVModel->GetDrawnPVPath()[npvp-2].GetPhysicalVolume()->GetLogicalVolume()->GetSolid());
1151 if(pbox) { 1150 if(pbox) {
1152 pareDims[0] = 2.*pbox->GetXHalfLe 1151 pareDims[0] = 2.*pbox->GetXHalfLength()*mm;
1153 pareDims[1] = 2.*pbox->GetYHalfLe 1152 pareDims[1] = 2.*pbox->GetYHalfLength()*mm;
1154 pareDims[2] = 2.*pbox->GetZHalfLe 1153 pareDims[2] = 2.*pbox->GetZHalfLength()*mm;
1155 G4cout << " mother size [" 1154 G4cout << " mother size ["
1156 << pPVModel->GetDrawnPVPath()[npv 1155 << pPVModel->GetDrawnPVPath()[npvp-2].GetPhysicalVolume()->GetName()
1157 << "] : " 1156 << "] : "
1158 << pareDims[0] << " x " 1157 << pareDims[0] << " x "
1159 << pareDims[1] << " x " 1158 << pareDims[1] << " x "
1160 << pareDims[2] << " [mm3]" 1159 << pareDims[2] << " [mm3]"
1161 << G4endl; 1160 << G4endl;
1162 } 1161 }
1163 G4double paraDims[3]; 1162 G4double paraDims[3];
1164 G4Box * boxP = dynamic_cast<G4Box * 1163 G4Box * boxP = dynamic_cast<G4Box *>(pPVModel->GetDrawnPVPath()[npvp-1].GetPhysicalVolume()->GetLogicalVolume()->GetSolid());
1165 if(boxP) { 1164 if(boxP) {
1166 paraDims[0] = 2.*boxP->GetXHalfLe 1165 paraDims[0] = 2.*boxP->GetXHalfLength()*mm;
1167 paraDims[1] = 2.*boxP->GetYHalfLe 1166 paraDims[1] = 2.*boxP->GetYHalfLength()*mm;
1168 paraDims[2] = 2.*boxP->GetZHalfLe 1167 paraDims[2] = 2.*boxP->GetZHalfLength()*mm;
1169 G4cout << " parameterised vol 1168 G4cout << " parameterised volume? ["
1170 << pPVModel->GetDrawnPVPath()[npv 1169 << pPVModel->GetDrawnPVPath()[npvp-1].GetPhysicalVolume()->GetName()
1171 << "] : " 1170 << "] : "
1172 << paraDims[0] << " x " 1171 << paraDims[0] << " x "
1173 << paraDims[1] << " x " 1172 << paraDims[1] << " x "
1174 << paraDims[2] << " [mm3] : " 1173 << paraDims[2] << " [mm3] : "
1175 << G4int(pareDims[0]/paraDims[0]) 1174 << G4int(pareDims[0]/paraDims[0]) << " x "
1176 << G4int(pareDims[1]/paraDims[1]) 1175 << G4int(pareDims[1]/paraDims[1]) << " x "
1177 << G4int(pareDims[2]/paraDims[2]) 1176 << G4int(pareDims[2]/paraDims[2]) << G4endl;
1178 } else { 1177 } else {
1179 G4cout << pPVModel->GetDrawnPVPat 1178 G4cout << pPVModel->GetDrawnPVPath()[npvp-2].GetPhysicalVolume()->GetName()
1180 << " isn't a G4Box." << G4endl; 1179 << " isn't a G4Box." << G4endl;
1181 } 1180 }
1182 } 1181 }
1183 } 1182 }
1184 1183
1185 1184
1186 } else if(kFlagParameterization == 1) { / 1185 } else if(kFlagParameterization == 1) { // G4PhantomParameterisation based geom. construnction
1187 1186
1188 // get the dimension of the parameteriz 1187 // get the dimension of the parameterized patient geometry
1189 G4PhantomParameterisation * phantomPara 1188 G4PhantomParameterisation * phantomPara
1190 = dynamic_cast<G4PhantomParameterisatio 1189 = dynamic_cast<G4PhantomParameterisation*>(pv[0]->GetParameterisation());
1191 if(phantomPara == NULL) { 1190 if(phantomPara == NULL) {
1192 G4Exception("G4GMocrenFileSceneHandle 1191 G4Exception("G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )",
1193 "gMocren0012", FatalExcep 1192 "gMocren0012", FatalException, "no G4PhantomParameterisation");
1194 } else { 1193 } else {
1195 ; 1194 ;
1196 } 1195 }
1197 1196
1198 kNestedVolumeDimension[0] = (G4int)phan << 1197 kNestedVolumeDimension[0] = phantomPara->GetNoVoxelsX();
1199 kNestedVolumeDimension[1] = (G4int)phan << 1198 kNestedVolumeDimension[1] = phantomPara->GetNoVoxelsY();
1200 kNestedVolumeDimension[2] = (G4int)phan << 1199 kNestedVolumeDimension[2] = phantomPara->GetNoVoxelsZ();
1201 kNestedVolumeDirAxis[0] = 0; 1200 kNestedVolumeDirAxis[0] = 0;
1202 kNestedVolumeDirAxis[1] = 1; 1201 kNestedVolumeDirAxis[1] = 1;
1203 kNestedVolumeDirAxis[2] = 2; 1202 kNestedVolumeDirAxis[2] = 2;
1204 1203
1205 // get densities of the parameterized p 1204 // get densities of the parameterized patient geometry
1206 G4int nX = kNestedVolumeDimension[0]; 1205 G4int nX = kNestedVolumeDimension[0];
1207 G4int nXY = kNestedVolumeDimension[0]*k 1206 G4int nXY = kNestedVolumeDimension[0]*kNestedVolumeDimension[1];
1208 1207
1209 for(G4int n0 = 0; n0 < kNestedVolumeDim 1208 for(G4int n0 = 0; n0 < kNestedVolumeDimension[0]; n0++) {
1210 for(G4int n1 = 0; n1 < kNestedVolumeD 1209 for(G4int n1 = 0; n1 < kNestedVolumeDimension[1]; n1++) {
1211 for(G4int n2 = 0; n2 < kNestedVolum 1210 for(G4int n2 = 0; n2 < kNestedVolumeDimension[2]; n2++) {
1212 1211
1213 G4int repNo = n0 + n1*nX + n2*nXY 1212 G4int repNo = n0 + n1*nX + n2*nXY;
1214 G4Material * mat = phantomPara->C 1213 G4Material * mat = phantomPara->ComputeMaterial(repNo, pv[0]);
1215 G4double dens = mat->GetDensity() 1214 G4double dens = mat->GetDensity()/(g/cm3);
1216 1215
1217 1216
1218 G4int idx[3]; 1217 G4int idx[3];
1219 idx[kNestedVolumeDirAxis[0]] = n0 1218 idx[kNestedVolumeDirAxis[0]] = n0;
1220 idx[kNestedVolumeDirAxis[1]] = n1 1219 idx[kNestedVolumeDirAxis[1]] = n1;
1221 idx[kNestedVolumeDirAxis[2]] = n2 1220 idx[kNestedVolumeDirAxis[2]] = n2;
1222 Index3D i3d(idx[0],idx[1],idx[2]) 1221 Index3D i3d(idx[0],idx[1],idx[2]);
1223 kNestedModality[i3d] = dens; 1222 kNestedModality[i3d] = dens;
1224 1223
1225 if(GFDEBUG_DET) 1224 if(GFDEBUG_DET)
1226 G4cout << " index: " << idx[0] 1225 G4cout << " index: " << idx[0] << ", " << idx[1] << ", " << idx[2]
1227 << " density: " << dens << G4e 1226 << " density: " << dens << G4endl;
1228 1227
1229 } 1228 }
1230 } 1229 }
1231 } 1230 }
1232 1231
1233 kVolumeSize.set(box.GetXHalfLength()*2/ 1232 kVolumeSize.set(box.GetXHalfLength()*2/mm,
1234 box.GetYHalfLength()*2/ 1233 box.GetYHalfLength()*2/mm,
1235 box.GetZHalfLength()*2/ 1234 box.GetZHalfLength()*2/mm);
1236 1235
1237 // mesh size 1236 // mesh size
1238 if(!kbSetModalityVoxelSize) { 1237 if(!kbSetModalityVoxelSize) {
1239 G4float spacing[3] = {static_cast<G4f 1238 G4float spacing[3] = {static_cast<G4float>(2*phantomPara->GetVoxelHalfX()),
1240 static_cast<G4float>(2*phantomPara- 1239 static_cast<G4float>(2*phantomPara->GetVoxelHalfY()),
1241 static_cast<G4float>(2*phantomPara- 1240 static_cast<G4float>(2*phantomPara->GetVoxelHalfZ())};
1242 kgMocrenIO->setVoxelSpacing(spacing); 1241 kgMocrenIO->setVoxelSpacing(spacing);
1243 kVoxelDimension.set(spacing[0], spaci 1242 kVoxelDimension.set(spacing[0], spacing[1], spacing[2]);
1244 kbSetModalityVoxelSize = true; 1243 kbSetModalityVoxelSize = true;
1245 } 1244 }
1246 } 1245 }
1247 1246
1248 } // if(box.GetName() == volName) 1247 } // if(box.GetName() == volName)
1249 1248
1250 1249
1251 // processing geometry construction based o 1250 // processing geometry construction based on the interactive PS
1252 if(!kFlagProcessedInteractiveScorer) { 1251 if(!kFlagProcessedInteractiveScorer) {
1253 1252
1254 1253
1255 // get the dimension of the geometry defi 1254 // get the dimension of the geometry defined in G4VScoringMesh
1256 G4ScoringManager * pScrMan = G4ScoringMan 1255 G4ScoringManager * pScrMan = G4ScoringManager::GetScoringManager();
1257 //if(!pScrMan) return; 1256 //if(!pScrMan) return;
1258 if(pScrMan) { 1257 if(pScrMan) {
1259 G4ScoringBox * scoringBox 1258 G4ScoringBox * scoringBox
1260 = dynamic_cast<G4ScoringBox*>(pScrMan->Fi 1259 = dynamic_cast<G4ScoringBox*>(pScrMan->FindMesh(volName));
1261 //if(scoringBox == NULL) return; 1260 //if(scoringBox == NULL) return;
1262 if(scoringBox) { 1261 if(scoringBox) {
1263 1262
1264 1263
1265 1264
1266 G4int nVoxels[3]; 1265 G4int nVoxels[3];
1267 scoringBox->GetNumberOfSegments(nVoxels); 1266 scoringBox->GetNumberOfSegments(nVoxels);
1268 // this order depends on the G4ScoringBox 1267 // this order depends on the G4ScoringBox
1269 kNestedVolumeDimension[0] = nVoxels[2]; 1268 kNestedVolumeDimension[0] = nVoxels[2];
1270 kNestedVolumeDimension[1] = nVoxels[1]; 1269 kNestedVolumeDimension[1] = nVoxels[1];
1271 kNestedVolumeDimension[2] = nVoxels[0]; 1270 kNestedVolumeDimension[2] = nVoxels[0];
1272 kNestedVolumeDirAxis[0] = 2; 1271 kNestedVolumeDirAxis[0] = 2;
1273 kNestedVolumeDirAxis[1] = 1; 1272 kNestedVolumeDirAxis[1] = 1;
1274 kNestedVolumeDirAxis[2] = 0; 1273 kNestedVolumeDirAxis[2] = 0;
1275 1274
1276 // get densities of the parameterized pat 1275 // get densities of the parameterized patient geometry
1277 for(G4int n0 = 0; n0 < kNestedVolumeDimen 1276 for(G4int n0 = 0; n0 < kNestedVolumeDimension[0]; n0++) {
1278 for(G4int n1 = 0; n1 < kNestedVolumeDim 1277 for(G4int n1 = 0; n1 < kNestedVolumeDimension[1]; n1++) {
1279 for(G4int n2 = 0; n2 < kNestedVolumeD 1278 for(G4int n2 = 0; n2 < kNestedVolumeDimension[2]; n2++) {
1280 1279
1281 G4double dens = 0.*(g/cm3); 1280 G4double dens = 0.*(g/cm3);
1282 1281
1283 G4int idx[3]; 1282 G4int idx[3];
1284 idx[kNestedVolumeDirAxis[0]] = n0; 1283 idx[kNestedVolumeDirAxis[0]] = n0;
1285 idx[kNestedVolumeDirAxis[1]] = n1; 1284 idx[kNestedVolumeDirAxis[1]] = n1;
1286 idx[kNestedVolumeDirAxis[2]] = n2; 1285 idx[kNestedVolumeDirAxis[2]] = n2;
1287 Index3D i3d(idx[0],idx[1],idx[2]); 1286 Index3D i3d(idx[0],idx[1],idx[2]);
1288 kNestedModality[i3d] = dens; 1287 kNestedModality[i3d] = dens;
1289 1288
1290 } 1289 }
1291 } 1290 }
1292 } 1291 }
1293 1292
1294 G4ThreeVector boxSize = scoringBox->GetSi 1293 G4ThreeVector boxSize = scoringBox->GetSize();
1295 if(GFDEBUG_DET > 1) { 1294 if(GFDEBUG_DET > 1) {
1296 G4cout << "Interactive Scorer : size - 1295 G4cout << "Interactive Scorer : size - "
1297 << boxSize.x()/cm << " x " 1296 << boxSize.x()/cm << " x "
1298 << boxSize.y()/cm << " x " 1297 << boxSize.y()/cm << " x "
1299 << boxSize.z()/cm << " [cm3]" << G4end 1298 << boxSize.z()/cm << " [cm3]" << G4endl;
1300 G4cout << "Interactive Scorer : # voxel 1299 G4cout << "Interactive Scorer : # voxels - "
1301 << nVoxels[0] << " x " 1300 << nVoxels[0] << " x "
1302 << nVoxels[1] << " x " 1301 << nVoxels[1] << " x "
1303 << nVoxels[2] << G4endl; 1302 << nVoxels[2] << G4endl;
1304 } 1303 }
1305 kVolumeSize.set(boxSize.x()*2, 1304 kVolumeSize.set(boxSize.x()*2,
1306 boxSize.y()*2, 1305 boxSize.y()*2,
1307 boxSize.z()*2); 1306 boxSize.z()*2);
1308 1307
1309 // mesh size 1308 // mesh size
1310 if(!kbSetModalityVoxelSize) { 1309 if(!kbSetModalityVoxelSize) {
1311 G4float spacing[3] = {static_cast<G4flo 1310 G4float spacing[3] = {static_cast<G4float>(boxSize.x()*2/nVoxels[0]),
1312 static_cast<G4float>(boxSize.y()*2/nV 1311 static_cast<G4float>(boxSize.y()*2/nVoxels[1]),
1313 static_cast<G4float>(boxSize.z()*2/nV 1312 static_cast<G4float>(boxSize.z()*2/nVoxels[2])};
1314 1313
1315 kgMocrenIO->setVoxelSpacing(spacing); 1314 kgMocrenIO->setVoxelSpacing(spacing);
1316 kVoxelDimension.set(spacing[0], spacing 1315 kVoxelDimension.set(spacing[0], spacing[1], spacing[2]);
1317 kbSetModalityVoxelSize = true; 1316 kbSetModalityVoxelSize = true;
1318 1317
1319 } 1318 }
1320 1319
1321 1320
1322 kVolumeTrans3D = fObjectTransformation; 1321 kVolumeTrans3D = fObjectTransformation;
1323 1322
1324 // translation for the scoring mesh 1323 // translation for the scoring mesh
1325 G4ThreeVector sbth = scoringBox->GetTrans 1324 G4ThreeVector sbth = scoringBox->GetTranslation();
1326 G4Translate3D sbtranslate(sbth); 1325 G4Translate3D sbtranslate(sbth);
1327 kVolumeTrans3D = kVolumeTrans3D*sbtransla 1326 kVolumeTrans3D = kVolumeTrans3D*sbtranslate;
1328 1327
1329 // rotation matrix for the scoring mesh 1328 // rotation matrix for the scoring mesh
1330 G4RotationMatrix sbrm; 1329 G4RotationMatrix sbrm;
1331 sbrm = scoringBox->GetRotationMatrix(); 1330 sbrm = scoringBox->GetRotationMatrix();
1332 if(!sbrm.isIdentity()) { 1331 if(!sbrm.isIdentity()) {
1333 G4ThreeVector sbdummy(0.,0.,0.); 1332 G4ThreeVector sbdummy(0.,0.,0.);
1334 G4Transform3D sbrotate(sbrm.inverse(), 1333 G4Transform3D sbrotate(sbrm.inverse(), sbdummy);
1335 kVolumeTrans3D = kVolumeTrans3D*sbrotat 1334 kVolumeTrans3D = kVolumeTrans3D*sbrotate;
1336 } 1335 }
1337 1336
1338 1337
1339 // coordination system correction for gMo 1338 // coordination system correction for gMocren
1340 G4ThreeVector raxisY(0., 1., 0.), dummyY( 1339 G4ThreeVector raxisY(0., 1., 0.), dummyY(0.,0.,0.);
1341 G4RotationMatrix rotY(raxisY, pi*rad); 1340 G4RotationMatrix rotY(raxisY, pi*rad);
1342 G4Transform3D trotY(rotY, dummyY); 1341 G4Transform3D trotY(rotY, dummyY);
1343 G4ThreeVector raxisZ(0., 0., 1.), dummyZ( 1342 G4ThreeVector raxisZ(0., 0., 1.), dummyZ(0.,0.,0.);
1344 G4RotationMatrix rotZ(raxisZ, pi*rad); 1343 G4RotationMatrix rotZ(raxisZ, pi*rad);
1345 G4Transform3D trotZ(rotZ, dummyZ); 1344 G4Transform3D trotZ(rotZ, dummyZ);
1346 1345
1347 kVolumeTrans3D = kVolumeTrans3D*trotY*tro 1346 kVolumeTrans3D = kVolumeTrans3D*trotY*trotZ;
1348 1347
1349 } 1348 }
1350 } 1349 }
1351 // 1350 //
1352 kFlagProcessedInteractiveScorer = true; 1351 kFlagProcessedInteractiveScorer = true;
1353 } 1352 }
1354 1353
1355 1354
1356 static G4VPhysicalVolume * volPV = NULL; 1355 static G4VPhysicalVolume * volPV = NULL;
1357 if(pPVModel->GetCurrentPV()->GetName() == v 1356 if(pPVModel->GetCurrentPV()->GetName() == volName) {
1358 volPV = pPVModel->GetCurrentPV(); 1357 volPV = pPVModel->GetCurrentPV();
1359 } 1358 }
1360 1359
1361 //-- add detectors 1360 //-- add detectors
1362 G4bool bAddDet = true; 1361 G4bool bAddDet = true;
1363 if(!kMessenger.getDrawVolumeGrid()) { 1362 if(!kMessenger.getDrawVolumeGrid()) {
1364 1363
1365 if(kFlagParameterization == 0) { // neste 1364 if(kFlagParameterization == 0) { // nested parameterisation
1366 /* 1365 /*
1367 G4String volDSolidName; 1366 G4String volDSolidName;
1368 if(volPV) { 1367 if(volPV) {
1369 G4int nDaughter = volPV->GetLogicalVo 1368 G4int nDaughter = volPV->GetLogicalVolume()->GetNoDaughters();
1370 G4VPhysicalVolume * volDPV = NULL; 1369 G4VPhysicalVolume * volDPV = NULL;
1371 if(nDaughter > 0) volDPV = volPV->Get 1370 if(nDaughter > 0) volDPV = volPV->GetLogicalVolume()->GetDaughter(0);
1372 if(volDPV) { 1371 if(volDPV) {
1373 nDaughter = volDPV->GetLogicalVolum 1372 nDaughter = volDPV->GetLogicalVolume()->GetNoDaughters();
1374 if(nDaughter > 0) 1373 if(nDaughter > 0)
1375 volDSolidName = volDPV->GetLogica 1374 volDSolidName = volDPV->GetLogicalVolume()->GetDaughter(0)
1376 ->GetLogicalVolume 1375 ->GetLogicalVolume()->GetSolid()->GetName();
1377 } 1376 }
1378 } 1377 }
1379 */ 1378 */
1380 1379
1381 //std::cout << "Parameterization volume 1380 //std::cout << "Parameterization volume: " << volName << " - "
1382 // << box.GetName() << std::en 1381 // << box.GetName() << std::endl;
1383 1382
1384 if(volName == box.GetName()) { 1383 if(volName == box.GetName()) {
1385 bAddDet = false; 1384 bAddDet = false;
1386 } 1385 }
1387 1386
1388 std::vector<G4String>::iterator itr = k 1387 std::vector<G4String>::iterator itr = kNestedVolumeNames.begin();
1389 for(; itr != kNestedVolumeNames.end(); 1388 for(; itr != kNestedVolumeNames.end(); itr++) {
1390 if(*itr == box.GetName()) { 1389 if(*itr == box.GetName()) {
1391 bAddDet = false; 1390 bAddDet = false;
1392 break; 1391 break;
1393 } 1392 }
1394 } 1393 }
1395 } else if(kFlagParameterization == 1) { / 1394 } else if(kFlagParameterization == 1) { // phantom paramemterisation
1396 1395
1397 G4String volDSolidName; 1396 G4String volDSolidName;
1398 if(volPV) { 1397 if(volPV) {
1399 volDSolidName = volPV->GetLogicalVolu 1398 volDSolidName = volPV->GetLogicalVolume()->GetDaughter(0)
1400 ->GetLogicalVolume()- 1399 ->GetLogicalVolume()->GetSolid()->GetName();
1401 } 1400 }
1402 1401
1403 //std::cout << "Phantom Parameterizatio 1402 //std::cout << "Phantom Parameterization volume: " << volDSolidName
1404 // << " - " << box.GetName() < 1403 // << " - " << box.GetName() << std::endl;
1405 1404
1406 if(volDSolidName == box.GetName()) { 1405 if(volDSolidName == box.GetName()) {
1407 bAddDet = false; 1406 bAddDet = false;
1408 } 1407 }
1409 1408
1410 } else if(kFlagParameterization == 2) { / 1409 } else if(kFlagParameterization == 2) { // interactive primitive scorer
1411 //std::cout << "Regular Parameterizatio 1410 //std::cout << "Regular Parameterization volume: " << box.GetName() << std::endl;
1412 } 1411 }
1413 1412
1414 } 1413 }
1415 if(bAddDet) AddDetector(box); 1414 if(bAddDet) AddDetector(box);
1416 1415
1417 1416
1418 } // void G4GMocrenFileSceneHandler::AddSolid 1417 } // void G4GMocrenFileSceneHandler::AddSolid( const G4Box& box )
1419 1418
1420 1419
1421 //----- Add tubes 1420 //----- Add tubes
1422 void 1421 void
1423 G4GMocrenFileSceneHandler::AddSolid( const G4 1422 G4GMocrenFileSceneHandler::AddSolid( const G4Tubs& tubes )
1424 { 1423 {
1425 if(GFDEBUG || G4VisManager::GetVerbosity() 1424 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
1426 G4cout << "***** AddSolid ( tubes )" << G 1425 G4cout << "***** AddSolid ( tubes )" << G4endl;
1427 1426
1428 //----- skip drawing invisible primitive 1427 //----- skip drawing invisible primitive
1429 if( !IsVisible() ) { return ; } 1428 if( !IsVisible() ) { return ; }
1430 1429
1431 //----- Initialize if necessary 1430 //----- Initialize if necessary
1432 GFBeginModeling(); 1431 GFBeginModeling();
1433 1432
1434 // 1433 //
1435 AddDetector(tubes); 1434 AddDetector(tubes);
1436 1435
1437 1436
1438 // for a debug 1437 // for a debug
1439 if(GFDEBUG_DET > 0) { 1438 if(GFDEBUG_DET > 0) {
1440 G4cout << "-------" << G4endl; 1439 G4cout << "-------" << G4endl;
1441 G4cout << " " << tubes.GetName() << G4 1440 G4cout << " " << tubes.GetName() << G4endl;
1442 G4Polyhedron * poly = tubes.CreatePolyhed 1441 G4Polyhedron * poly = tubes.CreatePolyhedron();
1443 G4int nv = poly->GetNoVertices(); 1442 G4int nv = poly->GetNoVertices();
1444 for(G4int i = 0; i < nv; i++) { 1443 for(G4int i = 0; i < nv; i++) {
1445 G4cout << " (" << poly->GetVertex(i) 1444 G4cout << " (" << poly->GetVertex(i).x() << ", "
1446 << poly->GetVertex(i).y() << ", " 1445 << poly->GetVertex(i).y() << ", "
1447 << poly->GetVertex(i).z() << ")" << G4 1446 << poly->GetVertex(i).z() << ")" << G4endl;
1448 } 1447 }
1449 delete poly; 1448 delete poly;
1450 } 1449 }
1451 1450
1452 const G4VModel* pv_model = GetModel(); 1451 const G4VModel* pv_model = GetModel();
1453 if (!pv_model) { return ; } 1452 if (!pv_model) { return ; }
1454 G4PhysicalVolumeModel* pPVModel = 1453 G4PhysicalVolumeModel* pPVModel =
1455 dynamic_cast<G4PhysicalVolumeModel*>(fpMo 1454 dynamic_cast<G4PhysicalVolumeModel*>(fpModel);
1456 if (!pPVModel) { return ; } 1455 if (!pPVModel) { return ; }
1457 G4Material * mat = pPVModel->GetCurrentMate 1456 G4Material * mat = pPVModel->GetCurrentMaterial();
1458 G4String name = mat->GetName(); 1457 G4String name = mat->GetName();
1459 1458
1460 } // void G4GMocrenFileSceneHandler::AddSolid 1459 } // void G4GMocrenFileSceneHandler::AddSolid( const G4Tubs& )
1461 1460
1462 1461
1463 1462
1464 //----- Add cons 1463 //----- Add cons
1465 void 1464 void
1466 G4GMocrenFileSceneHandler::AddSolid( const G4 1465 G4GMocrenFileSceneHandler::AddSolid( const G4Cons& cons )
1467 { 1466 {
1468 if(GFDEBUG || G4VisManager::GetVerbosity() 1467 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
1469 G4cout << "***** AddSolid ( cons )" << G4 1468 G4cout << "***** AddSolid ( cons )" << G4endl;
1470 1469
1471 //----- skip drawing invisible primitive 1470 //----- skip drawing invisible primitive
1472 if( !IsVisible() ) { return ; } 1471 if( !IsVisible() ) { return ; }
1473 1472
1474 //----- Initialize if necessary 1473 //----- Initialize if necessary
1475 GFBeginModeling(); 1474 GFBeginModeling();
1476 1475
1477 // 1476 //
1478 AddDetector(cons); 1477 AddDetector(cons);
1479 1478
1480 }// G4GMocrenFileSceneHandler::AddSolid( cons 1479 }// G4GMocrenFileSceneHandler::AddSolid( cons )
1481 1480
1482 1481
1483 //----- Add trd 1482 //----- Add trd
1484 void G4GMocrenFileSceneHandler::AddSolid ( co 1483 void G4GMocrenFileSceneHandler::AddSolid ( const G4Trd& trd )
1485 { 1484 {
1486 if(GFDEBUG || G4VisManager::GetVerbosity() 1485 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
1487 G4cout << "***** AddSolid ( trd )" << G4e 1486 G4cout << "***** AddSolid ( trd )" << G4endl;
1488 1487
1489 1488
1490 //----- skip drawing invisible primitive 1489 //----- skip drawing invisible primitive
1491 if( !IsVisible() ) { return ; } 1490 if( !IsVisible() ) { return ; }
1492 1491
1493 //----- Initialize if necessary 1492 //----- Initialize if necessary
1494 GFBeginModeling(); 1493 GFBeginModeling();
1495 1494
1496 // 1495 //
1497 AddDetector(trd); 1496 AddDetector(trd);
1498 1497
1499 } // G4GMocrenFileSceneHandler::AddSolid ( tr 1498 } // G4GMocrenFileSceneHandler::AddSolid ( trd )
1500 1499
1501 1500
1502 //----- Add sphere 1501 //----- Add sphere
1503 void G4GMocrenFileSceneHandler::AddSolid ( co 1502 void G4GMocrenFileSceneHandler::AddSolid ( const G4Sphere& sphere )
1504 { 1503 {
1505 if(GFDEBUG || G4VisManager::GetVerbosity() 1504 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
1506 G4cout << "***** AddSolid ( sphere )" << 1505 G4cout << "***** AddSolid ( sphere )" << G4endl;
1507 1506
1508 //----- skip drawing invisible primitive 1507 //----- skip drawing invisible primitive
1509 if( !IsVisible() ) { return ; } 1508 if( !IsVisible() ) { return ; }
1510 1509
1511 //----- Initialize if necessary 1510 //----- Initialize if necessary
1512 GFBeginModeling(); 1511 GFBeginModeling();
1513 1512
1514 // 1513 //
1515 AddDetector(sphere); 1514 AddDetector(sphere);
1516 1515
1517 } // G4GMocrenFileSceneHandler::AddSolid ( sp 1516 } // G4GMocrenFileSceneHandler::AddSolid ( sphere )
1518 1517
1519 1518
1520 //----- Add para 1519 //----- Add para
1521 void G4GMocrenFileSceneHandler::AddSolid (con 1520 void G4GMocrenFileSceneHandler::AddSolid (const G4Para& para)
1522 { 1521 {
1523 if(GFDEBUG || G4VisManager::GetVerbosity() 1522 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
1524 G4cout << "***** AddSolid ( para )" << G4 1523 G4cout << "***** AddSolid ( para )" << G4endl;
1525 1524
1526 //----- skip drawing invisible primitive 1525 //----- skip drawing invisible primitive
1527 if( !IsVisible() ) { return ; } 1526 if( !IsVisible() ) { return ; }
1528 1527
1529 //----- Initialize if necessary 1528 //----- Initialize if necessary
1530 GFBeginModeling(); 1529 GFBeginModeling();
1531 1530
1532 // 1531 //
1533 AddDetector(para); 1532 AddDetector(para);
1534 1533
1535 } // G4GMocrenFileSceneHandler::AddSolid ( pa 1534 } // G4GMocrenFileSceneHandler::AddSolid ( para )
1536 1535
1537 1536
1538 //----- Add trap 1537 //----- Add trap
1539 void G4GMocrenFileSceneHandler::AddSolid (con 1538 void G4GMocrenFileSceneHandler::AddSolid (const G4Trap& trap)
1540 { 1539 {
1541 if(GFDEBUG || G4VisManager::GetVerbosity() 1540 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
1542 G4cout << "***** AddSolid ( trap )" << G4 1541 G4cout << "***** AddSolid ( trap )" << G4endl;
1543 1542
1544 //----- skip drawing invisible primitive 1543 //----- skip drawing invisible primitive
1545 if( !IsVisible() ) { return ; } 1544 if( !IsVisible() ) { return ; }
1546 1545
1547 //----- Initialize if necessary 1546 //----- Initialize if necessary
1548 GFBeginModeling(); 1547 GFBeginModeling();
1549 1548
1550 // 1549 //
1551 AddDetector(trap); 1550 AddDetector(trap);
1552 1551
1553 } // G4GMocrenFileSceneHandler::AddSolid (con 1552 } // G4GMocrenFileSceneHandler::AddSolid (const G4Trap& trap)
1554 1553
1555 1554
1556 //----- Add torus 1555 //----- Add torus
1557 void 1556 void
1558 G4GMocrenFileSceneHandler::AddSolid( const G4 1557 G4GMocrenFileSceneHandler::AddSolid( const G4Torus& torus )
1559 { 1558 {
1560 if(GFDEBUG || G4VisManager::GetVerbosity() 1559 if(GFDEBUG || G4VisManager::GetVerbosity() >= G4VisManager::confirmations)
1561 G4cout << "***** AddSolid ( torus )" << G 1560 G4cout << "***** AddSolid ( torus )" << G4endl;
1562 1561
1563 //----- skip drawing invisible primitive 1562 //----- skip drawing invisible primitive
1564 if( !IsVisible() ) { return ; } 1563 if( !IsVisible() ) { return ; }
1565 1564
1566 //----- Initialize if necessary 1565 //----- Initialize if necessary
1567 GFBeginModeling(); 1566 GFBeginModeling();
1568 1567
1569 // 1568 //
1570 AddDetector(torus); 1569 AddDetector(torus);
1571 1570
1572 } // void G4GMocrenFileSceneHandler::AddSolid 1571 } // void G4GMocrenFileSceneHandler::AddSolid( const G4Torus& )
1573 1572
1574 1573
1575 1574
1576 //----- Add a shape which is not treated abov 1575 //----- Add a shape which is not treated above
1577 void G4GMocrenFileSceneHandler::AddSolid ( co 1576 void G4GMocrenFileSceneHandler::AddSolid ( const G4VSolid& solid )
1578 { 1577 {
1579 //----- skip drawing invisible primitive 1578 //----- skip drawing invisible primitive
1580 if( !IsVisible() ) { return ; } 1579 if( !IsVisible() ) { return ; }
1581 1580
1582 //----- Initialize if necessary 1581 //----- Initialize if necessary
1583 GFBeginModeling(); 1582 GFBeginModeling();
1584 1583
1585 // 1584 //
1586 AddDetector(solid); 1585 AddDetector(solid);
1587 1586
1588 //----- Send a primitive 1587 //----- Send a primitive
1589 G4VSceneHandler::AddSolid( solid ) ; 1588 G4VSceneHandler::AddSolid( solid ) ;
1590 1589
1591 } //G4GMocrenFileSceneHandler::AddSolid ( con 1590 } //G4GMocrenFileSceneHandler::AddSolid ( const G4VSolid& )
1592 1591
1593 #include "G4TrajectoriesModel.hh" 1592 #include "G4TrajectoriesModel.hh"
1594 #include "G4VTrajectory.hh" 1593 #include "G4VTrajectory.hh"
1595 #include "G4VTrajectoryPoint.hh" 1594 #include "G4VTrajectoryPoint.hh"
1596 1595
1597 //----- Add a trajectory 1596 //----- Add a trajectory
1598 void G4GMocrenFileSceneHandler::AddCompound(c 1597 void G4GMocrenFileSceneHandler::AddCompound(const G4VTrajectory & traj) {
1599 1598
1600 kbModelingTrajectory = true; 1599 kbModelingTrajectory = true;
1601 1600
1602 G4VSceneHandler::AddCompound(traj); 1601 G4VSceneHandler::AddCompound(traj);
1603 1602
1604 if(GFDEBUG_TRK) { 1603 if(GFDEBUG_TRK) {
1605 G4cout << " ::AddCompound(const G4VTrajec 1604 G4cout << " ::AddCompound(const G4VTrajectory&) >>>>>>>>> " << G4endl;
1606 G4TrajectoriesModel * pTrModel = dynamic_ 1605 G4TrajectoriesModel * pTrModel = dynamic_cast<G4TrajectoriesModel*>(fpModel);
1607 if (!pTrModel) { 1606 if (!pTrModel) {
1608 G4Exception 1607 G4Exception
1609 ("G4VSceneHandler::AddCompound(const G4VTra 1608 ("G4VSceneHandler::AddCompound(const G4VTrajectory&)",
1610 "gMocren0013", FatalException, "Not a G4Tr 1609 "gMocren0013", FatalException, "Not a G4TrajectoriesModel.");
1611 } else { 1610 } else {
1612 traj.DrawTrajectory(); 1611 traj.DrawTrajectory();
1613 1612
1614 const G4VTrajectory * trj = pTrModel->G 1613 const G4VTrajectory * trj = pTrModel->GetCurrentTrajectory();
1615 G4cout << "------ track" << G4endl; 1614 G4cout << "------ track" << G4endl;
1616 G4cout << " name: " << trj->GetP 1615 G4cout << " name: " << trj->GetParticleName() << G4endl;
1617 G4cout << " id: " << trj->GetT 1616 G4cout << " id: " << trj->GetTrackID() << G4endl;
1618 G4cout << " charge: " << trj->GetC 1617 G4cout << " charge: " << trj->GetCharge() << G4endl;
1619 G4cout << " momentum: " << trj->GetI 1618 G4cout << " momentum: " << trj->GetInitialMomentum() << G4endl;
1620 1619
1621 G4int nPnt = trj->GetPointEntries(); 1620 G4int nPnt = trj->GetPointEntries();
1622 G4cout << " point: "; 1621 G4cout << " point: ";
1623 for(G4int i = 0; i < nPnt; i++) { 1622 for(G4int i = 0; i < nPnt; i++) {
1624 G4cout << trj->GetPoint(i)->GetPosition() < 1623 G4cout << trj->GetPoint(i)->GetPosition() << ", ";
1625 } 1624 }
1626 G4cout << G4endl; 1625 G4cout << G4endl;
1627 } 1626 }
1628 G4cout << G4endl; 1627 G4cout << G4endl;
1629 } 1628 }
1630 1629
1631 kbModelingTrajectory = false; 1630 kbModelingTrajectory = false;
1632 } 1631 }
1633 1632
1634 #include <vector> 1633 #include <vector>
1635 #include "G4VHit.hh" 1634 #include "G4VHit.hh"
1636 #include "G4AttValue.hh" 1635 #include "G4AttValue.hh"
1637 //----- Add a hit 1636 //----- Add a hit
1638 void G4GMocrenFileSceneHandler::AddCompound( 1637 void G4GMocrenFileSceneHandler::AddCompound( const G4VHit & hit) {
1639 if(GFDEBUG_HIT) G4cout << " ::AddCompound(c 1638 if(GFDEBUG_HIT) G4cout << " ::AddCompound(const G4VHit&) >>>>>>>>> " << G4endl;
1640 1639
1641 G4VSceneHandler::AddCompound(hit); 1640 G4VSceneHandler::AddCompound(hit);
1642 1641
1643 /* 1642 /*
1644 const std::map<G4String, G4AttDef> * map 1643 const std::map<G4String, G4AttDef> * map = hit.GetAttDefs();
1645 if(!map) return; 1644 if(!map) return;
1646 std::map<G4String, G4AttDef>::const_itera 1645 std::map<G4String, G4AttDef>::const_iterator itr = map->begin();
1647 for(; itr != map->end(); itr++) { 1646 for(; itr != map->end(); itr++) {
1648 G4cout << itr->first << " : " << itr->sec 1647 G4cout << itr->first << " : " << itr->second.GetName()
1649 << " , " << itr->second.GetDesc() << G4en 1648 << " , " << itr->second.GetDesc() << G4endl;
1650 } 1649 }
1651 */ 1650 */
1652 1651
1653 std::vector<G4String> hitNames = kMessenger 1652 std::vector<G4String> hitNames = kMessenger.getHitNames();
1654 if(GFDEBUG_HIT) { 1653 if(GFDEBUG_HIT) {
1655 std::vector<G4String>::iterator itr = hit 1654 std::vector<G4String>::iterator itr = hitNames.begin();
1656 for(; itr != hitNames.end(); itr++) 1655 for(; itr != hitNames.end(); itr++)
1657 G4cout << " hit name : " << *itr << G4 1656 G4cout << " hit name : " << *itr << G4endl;
1658 } 1657 }
1659 1658
1660 std::vector<G4AttValue> * attval = hit.Crea 1659 std::vector<G4AttValue> * attval = hit.CreateAttValues();
1661 if(!attval) {G4cout << "0 empty " << G4endl 1660 if(!attval) {G4cout << "0 empty " << G4endl;}
1662 else { 1661 else {
1663 1662
1664 G4bool bid[3] = {false, false, false}; 1663 G4bool bid[3] = {false, false, false};
1665 Index3D id; 1664 Index3D id;
1666 1665
1667 std::vector<G4AttValue>::iterator itr; 1666 std::vector<G4AttValue>::iterator itr;
1668 // First, get IDs 1667 // First, get IDs
1669 for(itr = attval->begin(); itr != attval- 1668 for(itr = attval->begin(); itr != attval->end(); itr++) {
1670 std::string stmp = itr->GetValue(); 1669 std::string stmp = itr->GetValue();
1671 std::istringstream sval(stmp.c_str()); 1670 std::istringstream sval(stmp.c_str());
1672 1671
1673 if(itr->GetName() == G4String("XID")) { 1672 if(itr->GetName() == G4String("XID")) {
1674 sval >> id.x; 1673 sval >> id.x;
1675 bid[0] = true; 1674 bid[0] = true;
1676 continue; 1675 continue;
1677 } 1676 }
1678 if(itr->GetName() == G4String("YID")) { 1677 if(itr->GetName() == G4String("YID")) {
1679 sval >> id.y; 1678 sval >> id.y;
1680 bid[1] = true; 1679 bid[1] = true;
1681 continue; 1680 continue;
1682 } 1681 }
1683 if(itr->GetName() == G4String("ZID")) { 1682 if(itr->GetName() == G4String("ZID")) {
1684 sval >> id.z; 1683 sval >> id.z;
1685 bid[2] = true; 1684 bid[2] = true;
1686 continue; 1685 continue;
1687 } 1686 }
1688 } 1687 }
1689 1688
1690 G4int nhitname = (G4int)hitNames.size(); 1689 G4int nhitname = (G4int)hitNames.size();
1691 1690
1692 if(bid[0] && bid[1] && bid[2]) { 1691 if(bid[0] && bid[1] && bid[2]) {
1693 1692
1694 if(GFDEBUG_HIT) 1693 if(GFDEBUG_HIT)
1695 G4cout << " Hit : index(" << id.x << ", " < 1694 G4cout << " Hit : index(" << id.x << ", " << id.y << ", "
1696 << id.z << ")" << G4endl; 1695 << id.z << ")" << G4endl;
1697 1696
1698 // Get attributes 1697 // Get attributes
1699 for(itr = attval->begin(); itr != attva 1698 for(itr = attval->begin(); itr != attval->end(); itr++) {
1700 for(G4int i = 0; i < nhitname; i++) { 1699 for(G4int i = 0; i < nhitname; i++) {
1701 if(itr->GetName() == hitNames[i]) { 1700 if(itr->GetName() == hitNames[i]) {
1702 1701
1703 std::string stmp = itr->GetValue(); 1702 std::string stmp = itr->GetValue();
1704 std::istringstream sval(stmp.c_str()); 1703 std::istringstream sval(stmp.c_str());
1705 G4double value; 1704 G4double value;
1706 G4String unit; 1705 G4String unit;
1707 sval >> value >> unit; 1706 sval >> value >> unit;
1708 1707
1709 std::map<G4String, std::map<Index3D, G4 1708 std::map<G4String, std::map<Index3D, G4double> >::iterator kNestedHitsListItr;
1710 kNestedHitsListItr = kNestedHitsList.fi 1709 kNestedHitsListItr = kNestedHitsList.find(hitNames[i]);
1711 if(kNestedHitsListItr != kNestedHitsLis 1710 if(kNestedHitsListItr != kNestedHitsList.end()) {
1712 //fTempNestedHits = &kNestedHitsListI 1711 //fTempNestedHits = &kNestedHitsListItr->second;
1713 //(*fTempNestedHits)[id] = value; 1712 //(*fTempNestedHits)[id] = value;
1714 kNestedHitsListItr->second[id] = valu 1713 kNestedHitsListItr->second[id] = value;
1715 } else { 1714 } else {
1716 std::map<Index3D, G4double> hits; 1715 std::map<Index3D, G4double> hits;
1717 hits.insert(std::map<Index3D, G4doubl 1716 hits.insert(std::map<Index3D, G4double>::value_type(id, value));
1718 kNestedHitsList[hitNames[i]] = std::m << 1717 kNestedHitsList[hitNames[i]] = hits;
1719 } 1718 }
1720 1719
1721 1720
1722 if(GFDEBUG_HIT) 1721 if(GFDEBUG_HIT)
1723 G4cout << " : " << hitNames[i] << 1722 G4cout << " : " << hitNames[i] << " -> " << value
1724 << " [" << unit << "]" << G4endl; 1723 << " [" << unit << "]" << G4endl;
1725 } 1724 }
1726 } 1725 }
1727 } 1726 }
1728 } else { 1727 } else {
1729 G4Exception("G4GMocrenFileSceneHandler: 1728 G4Exception("G4GMocrenFileSceneHandler::AddCompound(const G4VHit &)",
1730 "gMocren0014", FatalException, "Error") 1729 "gMocren0014", FatalException, "Error");
1731 } 1730 }
1732 1731
1733 delete attval; 1732 delete attval;
1734 } 1733 }
1735 1734
1736 } 1735 }
1737 1736
1738 void G4GMocrenFileSceneHandler::AddCompound( 1737 void G4GMocrenFileSceneHandler::AddCompound( const G4VDigi & digi) {
1739 if(GFDEBUG_DIGI) G4cout << " ::AddCompound( 1738 if(GFDEBUG_DIGI) G4cout << " ::AddCompound(const G4VDigi&) >>>>>>>>> " << G4endl;
1740 G4VSceneHandler::AddCompound(digi); 1739 G4VSceneHandler::AddCompound(digi);
1741 } 1740 }
1742 1741
1743 void G4GMocrenFileSceneHandler::AddCompound(c 1742 void G4GMocrenFileSceneHandler::AddCompound(const G4THitsMap<G4double> & hits) {
1744 if(GFDEBUG_HIT) 1743 if(GFDEBUG_HIT)
1745 G4cout << " ::AddCompound(const std::map< 1744 G4cout << " ::AddCompound(const std::map<G4int, G4double*> &) >>>>>>>>> " << G4endl;
1746 1745
1747 1746
1748 std::vector<G4String> hitScorerNames = kMes 1747 std::vector<G4String> hitScorerNames = kMessenger.getHitScorerNames();
1749 G4int nhitname = (G4int)hitScorerNames.size 1748 G4int nhitname = (G4int)hitScorerNames.size();
1750 G4String scorername = static_cast<G4VHitsCo 1749 G4String scorername = static_cast<G4VHitsCollection>(hits).GetName();
1751 1750
1752 //-- --// 1751 //-- --//
1753 /* 1752 /*
1754 std::vector<G4String> hitScorerNames = kMes 1753 std::vector<G4String> hitScorerNames = kMessenger.getHitScorerNames();
1755 if(GFDEBUG_HIT) { 1754 if(GFDEBUG_HIT) {
1756 std::vector<G4String>::iterator itr = hit 1755 std::vector<G4String>::iterator itr = hitScorerNames.begin();
1757 for(; itr != hitScorerNames.end(); itr++) 1756 for(; itr != hitScorerNames.end(); itr++)
1758 G4cout << " PS name : " << *itr << G4e 1757 G4cout << " PS name : " << *itr << G4endl;
1759 } 1758 }
1760 */ 1759 */
1761 1760
1762 { // Scope bracket to avoid compiler messa 1761 { // Scope bracket to avoid compiler messages about shadowing (JA).
1763 //for(G4int i = 0; i < nhitname; i++) { 1762 //for(G4int i = 0; i < nhitname; i++) { // this selection trusts
1764 //if(scorername == hitScorerNames[i]) { 1763 //if(scorername == hitScorerNames[i]) { // thea command /vis/scene/add/psHits hit_name.
1765 1764
1766 G4int idx[3]; 1765 G4int idx[3];
1767 std::map<G4int, G4double*> * map = hits 1766 std::map<G4int, G4double*> * map = hits.GetMap();
1768 std::map<G4int, G4double*>::const_itera 1767 std::map<G4int, G4double*>::const_iterator itr = map->begin();
1769 for(; itr != map->end(); itr++) { 1768 for(; itr != map->end(); itr++) {
1770 GetNestedVolumeIndex(itr->first, idx); 1769 GetNestedVolumeIndex(itr->first, idx);
1771 Index3D id(idx[0], idx[1], idx[2]); 1770 Index3D id(idx[0], idx[1], idx[2]);
1772 1771
1773 std::map<G4String, std::map<Index3D, G4doub 1772 std::map<G4String, std::map<Index3D, G4double> >::iterator nestedHitsListItr;
1774 nestedHitsListItr = kNestedHitsList.find(sc 1773 nestedHitsListItr = kNestedHitsList.find(scorername);
1775 if(nestedHitsListItr != kNestedHitsList.end 1774 if(nestedHitsListItr != kNestedHitsList.end()) {
1776 nestedHitsListItr->second[id] = *(itr->se 1775 nestedHitsListItr->second[id] = *(itr->second);
1777 } else { 1776 } else {
1778 std::map<Index3D, G4double> hit; 1777 std::map<Index3D, G4double> hit;
1779 hit.insert(std::map<Index3D, G4double>::v 1778 hit.insert(std::map<Index3D, G4double>::value_type(id, *(itr->second)));
1780 kNestedHitsList[scorername] = std::move(h << 1779 kNestedHitsList[scorername] = hit;
1781 } 1780 }
1782 } 1781 }
1783 1782
1784 //break; 1783 //break;
1785 //} 1784 //}
1786 //} 1785 //}
1787 } 1786 }
1788 1787
1789 if(GFDEBUG_HIT) { 1788 if(GFDEBUG_HIT) {
1790 G4String meshname = static_cast<G4VHitsCo 1789 G4String meshname = static_cast<G4VHitsCollection>(hits).GetSDname();
1791 G4cout << " >>>>> " << meshname << 1790 G4cout << " >>>>> " << meshname << " : " << scorername << G4endl;
1792 1791
1793 for(G4int i = 0; i < nhitname; i++) 1792 for(G4int i = 0; i < nhitname; i++)
1794 if(scorername == hitScorerNames[i]) 1793 if(scorername == hitScorerNames[i])
1795 G4cout << " !!!! Hit scorer !!!! " << 1794 G4cout << " !!!! Hit scorer !!!! " << scorername << G4endl;
1796 1795
1797 G4cout << " dimension: " 1796 G4cout << " dimension: "
1798 << kNestedVolumeDimension[0] << " x " 1797 << kNestedVolumeDimension[0] << " x "
1799 << kNestedVolumeDimension[1] << " x " 1798 << kNestedVolumeDimension[1] << " x "
1800 << kNestedVolumeDimension[2] << G4endl; 1799 << kNestedVolumeDimension[2] << G4endl;
1801 1800
1802 G4int id[3]; 1801 G4int id[3];
1803 std::map<G4int, G4double*> * map = hits.G 1802 std::map<G4int, G4double*> * map = hits.GetMap();
1804 std::map<G4int, G4double*>::const_iterato 1803 std::map<G4int, G4double*>::const_iterator itr = map->begin();
1805 for(; itr != map->end(); itr++) { 1804 for(; itr != map->end(); itr++) {
1806 GetNestedVolumeIndex(itr->first, id); 1805 GetNestedVolumeIndex(itr->first, id);
1807 G4cout << "[" << itr->first << "] " 1806 G4cout << "[" << itr->first << "] "
1808 << "("<< id[0] << "," << id[1] << "," 1807 << "("<< id[0] << "," << id[1] << "," << id[2] << ")"
1809 << *(itr->second) << ", "; 1808 << *(itr->second) << ", ";
1810 } 1809 }
1811 G4cout << G4endl; 1810 G4cout << G4endl;
1812 } 1811 }
1813 } 1812 }
1814 1813
1815 void G4GMocrenFileSceneHandler::AddCompound(c 1814 void G4GMocrenFileSceneHandler::AddCompound(const G4THitsMap<G4StatDouble> & hits) {
1816 if(GFDEBUG_HIT) 1815 if(GFDEBUG_HIT)
1817 G4cout << " ::AddCompound(const std::map< 1816 G4cout << " ::AddCompound(const std::map<G4int, G4StatDouble*> &) >>>>>>>>> " << G4endl;
1818 1817
1819 1818
1820 std::vector<G4String> hitScorerNames = kMes 1819 std::vector<G4String> hitScorerNames = kMessenger.getHitScorerNames();
1821 G4int nhitname = (G4int)hitScorerNames.size 1820 G4int nhitname = (G4int)hitScorerNames.size();
1822 G4String scorername = static_cast<G4VHitsCo 1821 G4String scorername = static_cast<G4VHitsCollection>(hits).GetName();
1823 1822
1824 //-- --// 1823 //-- --//
1825 /* 1824 /*
1826 std::vector<G4String> hitScorerNames = kMes 1825 std::vector<G4String> hitScorerNames = kMessenger.getHitScorerNames();
1827 if(GFDEBUG_HIT) { 1826 if(GFDEBUG_HIT) {
1828 std::vector<G4String>::iterator itr = hit 1827 std::vector<G4String>::iterator itr = hitScorerNames.begin();
1829 for(; itr != hitScorerNames.end(); itr++) 1828 for(; itr != hitScorerNames.end(); itr++)
1830 G4cout << " PS name : " << *itr << G4e 1829 G4cout << " PS name : " << *itr << G4endl;
1831 } 1830 }
1832 */ 1831 */
1833 1832
1834 { // Scope bracket to avoid compiler messa 1833 { // Scope bracket to avoid compiler messages about shadowing (JA).
1835 //for(G4int i = 0; i < nhitname; i++) { 1834 //for(G4int i = 0; i < nhitname; i++) { // this selection trusts
1836 //if(scorername == hitScorerNames[i]) { 1835 //if(scorername == hitScorerNames[i]) { // thea command /vis/scene/add/psHits hit_name.
1837 1836
1838 G4int idx[3]; 1837 G4int idx[3];
1839 std::map<G4int, G4StatDouble*> * map = 1838 std::map<G4int, G4StatDouble*> * map = hits.GetMap();
1840 std::map<G4int, G4StatDouble*>::const_i 1839 std::map<G4int, G4StatDouble*>::const_iterator itr = map->begin();
1841 for(; itr != map->end(); itr++) { 1840 for(; itr != map->end(); itr++) {
1842 GetNestedVolumeIndex(itr->first, idx); 1841 GetNestedVolumeIndex(itr->first, idx);
1843 Index3D id(idx[0], idx[1], idx[2]); 1842 Index3D id(idx[0], idx[1], idx[2]);
1844 1843
1845 std::map<G4String, std::map<Index3D, G4doub 1844 std::map<G4String, std::map<Index3D, G4double> >::iterator nestedHitsListItr;
1846 nestedHitsListItr = kNestedHitsList.find(sc 1845 nestedHitsListItr = kNestedHitsList.find(scorername);
1847 if(nestedHitsListItr != kNestedHitsList.end 1846 if(nestedHitsListItr != kNestedHitsList.end()) {
1848 nestedHitsListItr->second[id] = itr->seco 1847 nestedHitsListItr->second[id] = itr->second->sum_wx();
1849 } else { 1848 } else {
1850 std::map<Index3D, G4double> hit; 1849 std::map<Index3D, G4double> hit;
1851 hit.insert(std::map<Index3D, G4double>::v 1850 hit.insert(std::map<Index3D, G4double>::value_type(id, itr->second->sum_wx()));
1852 kNestedHitsList[scorername] = std::move(h << 1851 kNestedHitsList[scorername] = hit;
1853 } 1852 }
1854 } 1853 }
1855 1854
1856 //break; 1855 //break;
1857 //} 1856 //}
1858 //} 1857 //}
1859 } 1858 }
1860 1859
1861 if(GFDEBUG_HIT) { 1860 if(GFDEBUG_HIT) {
1862 G4String meshname = static_cast<G4VHitsCo 1861 G4String meshname = static_cast<G4VHitsCollection>(hits).GetSDname();
1863 G4cout << " >>>>> " << meshname << 1862 G4cout << " >>>>> " << meshname << " : " << scorername << G4endl;
1864 1863
1865 for(G4int i = 0; i < nhitname; i++) 1864 for(G4int i = 0; i < nhitname; i++)
1866 if(scorername == hitScorerNames[i]) 1865 if(scorername == hitScorerNames[i])
1867 G4cout << " !!!! Hit scorer !!!! " << 1866 G4cout << " !!!! Hit scorer !!!! " << scorername << G4endl;
1868 1867
1869 G4cout << " dimension: " 1868 G4cout << " dimension: "
1870 << kNestedVolumeDimension[0] << " x " 1869 << kNestedVolumeDimension[0] << " x "
1871 << kNestedVolumeDimension[1] << " x " 1870 << kNestedVolumeDimension[1] << " x "
1872 << kNestedVolumeDimension[2] << G4endl; 1871 << kNestedVolumeDimension[2] << G4endl;
1873 1872
1874 G4int id[3]; 1873 G4int id[3];
1875 std::map<G4int, G4StatDouble*> * map = hi 1874 std::map<G4int, G4StatDouble*> * map = hits.GetMap();
1876 std::map<G4int, G4StatDouble*>::const_ite 1875 std::map<G4int, G4StatDouble*>::const_iterator itr = map->begin();
1877 for(; itr != map->end(); itr++) { 1876 for(; itr != map->end(); itr++) {
1878 GetNestedVolumeIndex(itr->first, id); 1877 GetNestedVolumeIndex(itr->first, id);
1879 G4cout << "[" << itr->first << "] " 1878 G4cout << "[" << itr->first << "] "
1880 << "("<< id[0] << "," << id[1] << "," 1879 << "("<< id[0] << "," << id[1] << "," << id[2] << ")"
1881 << itr->second->sum_wx() << ", "; 1880 << itr->second->sum_wx() << ", ";
1882 } 1881 }
1883 G4cout << G4endl; 1882 G4cout << G4endl;
1884 } 1883 }
1885 } 1884 }
1886 1885
1887 //----- 1886 //-----
1888 G4bool G4GMocrenFileSceneHandler::IsVisible() 1887 G4bool G4GMocrenFileSceneHandler::IsVisible()
1889 { 1888 {
1890 //----- 1889 //-----
1891 G4bool visibility = true ; 1890 G4bool visibility = true ;
1892 1891
1893 const G4VisAttributes* pVisAttribs = 1892 const G4VisAttributes* pVisAttribs =
1894 fpViewer->GetApplicableVisAttributes( fpV 1893 fpViewer->GetApplicableVisAttributes( fpVisAttribs );
1895 1894
1896 if(pVisAttribs) { 1895 if(pVisAttribs) {
1897 visibility = pVisAttribs->IsVisible(); 1896 visibility = pVisAttribs->IsVisible();
1898 } 1897 }
1899 1898
1900 return visibility ; 1899 return visibility ;
1901 1900
1902 } // G4GMocrenFileSceneHandler::IsVisible() 1901 } // G4GMocrenFileSceneHandler::IsVisible()
1903 1902
1904 1903
1905 //----- 1904 //-----
1906 void G4GMocrenFileSceneHandler::ClearTransien 1905 void G4GMocrenFileSceneHandler::ClearTransientStore()
1907 { 1906 {
1908 // This is typically called after an update 1907 // This is typically called after an update and before drawing hits
1909 // of the next event. To simulate the clea 1908 // of the next event. To simulate the clearing of "transients"
1910 // (hits, etc.) the detector is redrawn... 1909 // (hits, etc.) the detector is redrawn...
1911 if (fpViewer) { 1910 if (fpViewer) {
1912 fpViewer -> SetView (); 1911 fpViewer -> SetView ();
1913 fpViewer -> ClearView (); 1912 fpViewer -> ClearView ();
1914 fpViewer -> DrawView (); 1913 fpViewer -> DrawView ();
1915 } 1914 }
1916 } 1915 }
1917 1916
1918 //----- 1917 //-----
1919 void G4GMocrenFileSceneHandler::AddDetector(c 1918 void G4GMocrenFileSceneHandler::AddDetector(const G4VSolid & solid) {
1920 1919
1921 Detector detector; 1920 Detector detector;
1922 1921
1923 // detector name 1922 // detector name
1924 detector.name = solid.GetName(); 1923 detector.name = solid.GetName();
1925 if(GFDEBUG_DET > 1) 1924 if(GFDEBUG_DET > 1)
1926 G4cout << "0 Detector name : " << detecto 1925 G4cout << "0 Detector name : " << detector.name << G4endl;
1927 1926
1928 const G4VModel* pv_model = GetModel(); 1927 const G4VModel* pv_model = GetModel();
1929 if (!pv_model) { return ; } 1928 if (!pv_model) { return ; }
1930 G4PhysicalVolumeModel* pPVModel = 1929 G4PhysicalVolumeModel* pPVModel =
1931 dynamic_cast<G4PhysicalVolumeModel*>(fpMo 1930 dynamic_cast<G4PhysicalVolumeModel*>(fpModel);
1932 if (!pPVModel) { return ; } 1931 if (!pPVModel) { return ; }
1933 1932
1934 // edge points of the detector 1933 // edge points of the detector
1935 std::vector<G4float *> dedges; 1934 std::vector<G4float *> dedges;
1936 G4Polyhedron * poly = solid.CreatePolyhedro 1935 G4Polyhedron * poly = solid.CreatePolyhedron();
1937 detector.polyhedron = poly; 1936 detector.polyhedron = poly;
1938 detector.transform3D = fObjectTransformatio 1937 detector.transform3D = fObjectTransformation;
1939 1938
1940 // retrieve color 1939 // retrieve color
1941 unsigned char uccolor[3] = {30, 30, 30}; 1940 unsigned char uccolor[3] = {30, 30, 30};
1942 if(pPVModel->GetCurrentLV()->GetVisAttribut 1941 if(pPVModel->GetCurrentLV()->GetVisAttributes()) {
1943 G4Color color = pPVModel->GetCurrentLV()- 1942 G4Color color = pPVModel->GetCurrentLV()->GetVisAttributes()->GetColor();
1944 uccolor[0] = (unsigned char)(color.GetRed 1943 uccolor[0] = (unsigned char)(color.GetRed()*255);
1945 uccolor[1] = (unsigned char)(color.GetGre 1944 uccolor[1] = (unsigned char)(color.GetGreen()*255);
1946 uccolor[2] = (unsigned char)(color.GetBlu 1945 uccolor[2] = (unsigned char)(color.GetBlue()*255);
1947 //if(uccolor[0] < 2 && uccolor[1] < 2 && 1946 //if(uccolor[0] < 2 && uccolor[1] < 2 && uccolor[2] < 2)
1948 //uccolor[0] = uccolor[1] = uccolor[2] = 1947 //uccolor[0] = uccolor[1] = uccolor[2] = 30; // dark grey
1949 } 1948 }
1950 for(G4int i = 0; i < 3; i++) detector.color 1949 for(G4int i = 0; i < 3; i++) detector.color[i] = uccolor[i];
1951 // 1950 //
1952 kDetectors.push_back(detector); 1951 kDetectors.push_back(detector);
1953 1952
1954 if(GFDEBUG_DET > 1) { 1953 if(GFDEBUG_DET > 1) {
1955 G4cout << "0 color: (" << (G4int)uc 1954 G4cout << "0 color: (" << (G4int)uccolor[0] << ", "
1956 << (G4int)uccolor[1] << ", " << (G4int)u 1955 << (G4int)uccolor[1] << ", " << (G4int)uccolor[2] << ")"
1957 << G4endl; 1956 << G4endl;
1958 } 1957 }
1959 1958
1960 } 1959 }
1961 1960
1962 //----- 1961 //-----
1963 void G4GMocrenFileSceneHandler::ExtractDetect 1962 void G4GMocrenFileSceneHandler::ExtractDetector() {
1964 1963
1965 std::vector<Detector>::iterator itr = kDete 1964 std::vector<Detector>::iterator itr = kDetectors.begin();
1966 1965
1967 for(; itr != kDetectors.end(); itr++) { 1966 for(; itr != kDetectors.end(); itr++) {
1968 1967
1969 // detector name 1968 // detector name
1970 G4String detname = itr->name; 1969 G4String detname = itr->name;
1971 if(GFDEBUG_DET > 1) 1970 if(GFDEBUG_DET > 1)
1972 G4cout << "Detector name : " << detname 1971 G4cout << "Detector name : " << detname << G4endl;
1973 1972
1974 // edge points of the detector 1973 // edge points of the detector
1975 std::vector<G4float *> dedges; 1974 std::vector<G4float *> dedges;
1976 G4Polyhedron * poly = itr->polyhedron; 1975 G4Polyhedron * poly = itr->polyhedron;
1977 poly->Transform(itr->transform3D); 1976 poly->Transform(itr->transform3D);
1978 G4Transform3D invVolTrans = kVolumeTrans3 1977 G4Transform3D invVolTrans = kVolumeTrans3D.inverse();
1979 poly->Transform(invVolTrans); 1978 poly->Transform(invVolTrans);
1980 1979
1981 G4Point3D v1, v2; 1980 G4Point3D v1, v2;
1982 G4bool bnext = true; 1981 G4bool bnext = true;
1983 G4int next; 1982 G4int next;
1984 G4int nedges = 0; 1983 G4int nedges = 0;
1985 // 1984 //
1986 while(bnext) { 1985 while(bnext) {
1987 if(!(poly->GetNextEdge(v1, v2, next))) 1986 if(!(poly->GetNextEdge(v1, v2, next))) bnext =false;
1988 G4float * edge = new G4float[6]; 1987 G4float * edge = new G4float[6];
1989 edge[0] = v1.x()/mm; 1988 edge[0] = v1.x()/mm;
1990 edge[1] = v1.y()/mm; 1989 edge[1] = v1.y()/mm;
1991 edge[2] = v1.z()/mm; 1990 edge[2] = v1.z()/mm;
1992 edge[3] = v2.x()/mm; 1991 edge[3] = v2.x()/mm;
1993 edge[4] = v2.y()/mm; 1992 edge[4] = v2.y()/mm;
1994 edge[5] = v2.z()/mm; 1993 edge[5] = v2.z()/mm;
1995 dedges.push_back(edge); 1994 dedges.push_back(edge);
1996 nedges++; 1995 nedges++;
1997 } 1996 }
1998 //delete poly; 1997 //delete poly;
1999 // detector color 1998 // detector color
2000 unsigned char uccolor[3] = {itr->color[0] 1999 unsigned char uccolor[3] = {itr->color[0],
2001 itr->color[1], 2000 itr->color[1],
2002 itr->color[2]}; 2001 itr->color[2]};
2003 // 2002 //
2004 kgMocrenIO->addDetector(detname, dedges, 2003 kgMocrenIO->addDetector(detname, dedges, uccolor);
2005 for(G4int i = 0; i < nedges; i++) { // # 2004 for(G4int i = 0; i < nedges; i++) { // # of edges is 12.
2006 delete [] dedges[i]; 2005 delete [] dedges[i];
2007 } 2006 }
2008 dedges.clear(); 2007 dedges.clear();
2009 2008
2010 if(GFDEBUG_DET > 1) { 2009 if(GFDEBUG_DET > 1) {
2011 G4cout << " color: (" << (G4int)uc 2010 G4cout << " color: (" << (G4int)uccolor[0] << ", "
2012 << (G4int)uccolor[1] << ", " << (G4int 2011 << (G4int)uccolor[1] << ", " << (G4int)uccolor[2] << ")"
2013 << G4endl; 2012 << G4endl;
2014 } 2013 }
2015 } 2014 }
2016 } 2015 }
2017 2016
2018 void G4GMocrenFileSceneHandler::GetNestedVolu 2017 void G4GMocrenFileSceneHandler::GetNestedVolumeIndex(G4int _idx, G4int _idx3d[3]) {
2019 if(kNestedVolumeDimension[0] == 0 || 2018 if(kNestedVolumeDimension[0] == 0 ||
2020 kNestedVolumeDimension[1] == 0 || 2019 kNestedVolumeDimension[1] == 0 ||
2021 kNestedVolumeDimension[2] == 0) { 2020 kNestedVolumeDimension[2] == 0) {
2022 for(G4int i = 0; i < 3; i++) _idx3d[i] = 2021 for(G4int i = 0; i < 3; i++) _idx3d[i] = 0;
2023 return; 2022 return;
2024 } 2023 }
2025 2024
2026 2025
2027 if(kFlagParameterization == 0) { 2026 if(kFlagParameterization == 0) {
2028 2027
2029 G4int plane = kNestedVolumeDimension[2]*k 2028 G4int plane = kNestedVolumeDimension[2]*kNestedVolumeDimension[1];
2030 G4int line = kNestedVolumeDimension[2]; 2029 G4int line = kNestedVolumeDimension[2];
2031 2030
2032 /* 2031 /*
2033 G4int idx3d[3]; 2032 G4int idx3d[3];
2034 idx3d[0] = _idx/plane; 2033 idx3d[0] = _idx/plane;
2035 idx3d[1] = (_idx%plane)/line; 2034 idx3d[1] = (_idx%plane)/line;
2036 idx3d[2] = (_idx%plane)%line; 2035 idx3d[2] = (_idx%plane)%line;
2037 _idx3d[0] = idx3d[kNestedVolumeDirAxis[0]]; 2036 _idx3d[0] = idx3d[kNestedVolumeDirAxis[0]];
2038 _idx3d[1] = idx3d[kNestedVolumeDirAxis[1]]; 2037 _idx3d[1] = idx3d[kNestedVolumeDirAxis[1]];
2039 _idx3d[2] = idx3d[kNestedVolumeDirAxis[2]]; 2038 _idx3d[2] = idx3d[kNestedVolumeDirAxis[2]];
2040 */ 2039 */
2041 2040
2042 _idx3d[kNestedVolumeDirAxis[0]] = _idx/pl 2041 _idx3d[kNestedVolumeDirAxis[0]] = _idx/plane;
2043 _idx3d[kNestedVolumeDirAxis[1]] = (_idx%p 2042 _idx3d[kNestedVolumeDirAxis[1]] = (_idx%plane)/line;
2044 _idx3d[kNestedVolumeDirAxis[2]] = (_idx%p 2043 _idx3d[kNestedVolumeDirAxis[2]] = (_idx%plane)%line;
2045 2044
2046 2045
2047 2046
2048 /* 2047 /*
2049 2048
2050 G4cout << "G4GMocrenFileSceneHandler::GetNe 2049 G4cout << "G4GMocrenFileSceneHandler::GetNestedVolumeIndex : " << G4endl;
2051 G4cout << "(depi, depj, depk) : " 2050 G4cout << "(depi, depj, depk) : "
2052 << kNestedVolumeDirAxis[0] << ", " 2051 << kNestedVolumeDirAxis[0] << ", "
2053 << kNestedVolumeDirAxis[1] << ", " 2052 << kNestedVolumeDirAxis[1] << ", "
2054 << kNestedVolumeDirAxis[2] << G4endl; 2053 << kNestedVolumeDirAxis[2] << G4endl;
2055 G4cout << "(ni, nj, nk) :" 2054 G4cout << "(ni, nj, nk) :"
2056 << kNestedVolumeDimension[0] << ", " 2055 << kNestedVolumeDimension[0] << ", "
2057 << kNestedVolumeDimension[1] << ", " 2056 << kNestedVolumeDimension[1] << ", "
2058 << kNestedVolumeDimension[2] << " - " << G 2057 << kNestedVolumeDimension[2] << " - " << G4endl;
2059 2058
2060 G4cout << " _idx = " << _idx << " : plane 2059 G4cout << " _idx = " << _idx << " : plane = "
2061 << plane << " , line = " << line << G4en 2060 << plane << " , line = " << line << G4endl;
2062 G4cout << "(idx,idy,idz) + " << _idx3d[0] < 2061 G4cout << "(idx,idy,idz) + " << _idx3d[0] << ", "
2063 << _idx3d[1] << ", " << _idx3d[2] << " + " 2062 << _idx3d[1] << ", " << _idx3d[2] << " + " << G4endl;
2064 2063
2065 */ 2064 */
2066 2065
2067 2066
2068 2067
2069 } else { 2068 } else {
2070 2069
2071 G4int plane = kNestedVolumeDimension[0]*k 2070 G4int plane = kNestedVolumeDimension[0]*kNestedVolumeDimension[1];
2072 G4int line = kNestedVolumeDimension[0]; 2071 G4int line = kNestedVolumeDimension[0];
2073 _idx3d[kNestedVolumeDirAxis[2]] = _idx/pl 2072 _idx3d[kNestedVolumeDirAxis[2]] = _idx/plane;
2074 _idx3d[kNestedVolumeDirAxis[1]] = (_idx%p 2073 _idx3d[kNestedVolumeDirAxis[1]] = (_idx%plane)/line;
2075 _idx3d[kNestedVolumeDirAxis[0]] = (_idx%p 2074 _idx3d[kNestedVolumeDirAxis[0]] = (_idx%plane)%line;
2076 2075
2077 } 2076 }
2078 2077
2079 } 2078 }
2080 2079
2081 2080
2082 //-- --// 2081 //-- --//
2083 G4GMocrenFileSceneHandler::Detector::Detector 2082 G4GMocrenFileSceneHandler::Detector::Detector()
2084 : polyhedron(0) { 2083 : polyhedron(0) {
2085 color[0] = color[1] = color[2] = 255; 2084 color[0] = color[1] = color[2] = 255;
2086 } 2085 }
2087 G4GMocrenFileSceneHandler::Detector::~Detecto 2086 G4GMocrenFileSceneHandler::Detector::~Detector() {
2088 if(!polyhedron) delete polyhedron; 2087 if(!polyhedron) delete polyhedron;
2089 } 2088 }
2090 void G4GMocrenFileSceneHandler::Detector::cle 2089 void G4GMocrenFileSceneHandler::Detector::clear() {
2091 name.clear(); 2090 name.clear();
2092 if(!polyhedron) delete polyhedron; 2091 if(!polyhedron) delete polyhedron;
2093 color[0] = color[1] = color[2] = 255; 2092 color[0] = color[1] = color[2] = 255;
2094 transform3D = G4Transform3D::Identity; 2093 transform3D = G4Transform3D::Identity;
2095 } 2094 }
2096 2095
2097 //-- --// 2096 //-- --//
2098 G4GMocrenFileSceneHandler::Index3D::Index3D() 2097 G4GMocrenFileSceneHandler::Index3D::Index3D()
2099 : x(0), y(0), z(0) { 2098 : x(0), y(0), z(0) {
2100 ; 2099 ;
2101 } 2100 }
2102 2101
2103 G4GMocrenFileSceneHandler::Index3D::Index3D(c 2102 G4GMocrenFileSceneHandler::Index3D::Index3D(const Index3D & _index3D)
2104 : x(_index3D.x), y(_index3D.y), z(_index3D. 2103 : x(_index3D.x), y(_index3D.y), z(_index3D.z) {
2105 //: x(_index3D.X()), 2104 //: x(_index3D.X()),
2106 //y(_index3D.Y()), 2105 //y(_index3D.Y()),
2107 //z(_index3D.Z()) { 2106 //z(_index3D.Z()) {
2108 // : x(static_cast<Index3D>(_index3D).x), 2107 // : x(static_cast<Index3D>(_index3D).x),
2109 // y(static_cast<Index3D>(_index3D).y), 2108 // y(static_cast<Index3D>(_index3D).y),
2110 // z(static_cast<Index3D>(_index3D).z) { 2109 // z(static_cast<Index3D>(_index3D).z) {
2111 ; 2110 ;
2112 } 2111 }
2113 2112
2114 G4GMocrenFileSceneHandler::Index3D::Index3D(G 2113 G4GMocrenFileSceneHandler::Index3D::Index3D(G4int _x, G4int _y, G4int _z)
2115 : x(_x), y(_y), z(_z) { 2114 : x(_x), y(_y), z(_z) {
2116 ; 2115 ;
2117 } 2116 }
2118 G4bool G4GMocrenFileSceneHandler::Index3D::op 2117 G4bool G4GMocrenFileSceneHandler::Index3D::operator < (const Index3D & _right) const {
2119 if(z < static_cast<Index3D>(_right).z) { 2118 if(z < static_cast<Index3D>(_right).z) {
2120 return true; 2119 return true;
2121 } else if(z == _right.z) { 2120 } else if(z == _right.z) {
2122 if(y < static_cast<Index3D>(_right).y) re 2121 if(y < static_cast<Index3D>(_right).y) return true;
2123 else if(y == _right.y) 2122 else if(y == _right.y)
2124 if(x < static_cast<Index3D>(_right).x) 2123 if(x < static_cast<Index3D>(_right).x) return true;
2125 } 2124 }
2126 return false; 2125 return false;
2127 } 2126 }
2128 G4bool G4GMocrenFileSceneHandler::Index3D::op 2127 G4bool G4GMocrenFileSceneHandler::Index3D::operator == (const Index3D & _right) const {
2129 if(z == _right.z && y == _right.y && x == _ 2128 if(z == _right.z && y == _right.y && x == _right.x) return true;
2130 return false; 2129 return false;
2131 } 2130 }
2132 2131