Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/neuron/src/ITTrackingAction.cc

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collaboration publication:
 29 // Med. Phys. 37 (2010) 4692-4708
 30 // and papers
 31 // M. Batmunkh et al. J Radiat Res Appl Sci 8 (2015) 498-507
 32 // O. Belov et al. Physica Medica 32 (2016) 1510-1520
 33 // The Geant4-DNA web site is available at http://geant4-dna.org
 34 //
 35 // -------------------------------------------------------------------
 36 // November 2016
 37 // -------------------------------------------------------------------
 38 //
 39 //
 40 /// \file ITTrackingAction.hh
 41 /// \brief Implementation of the ITTrackingAction class
 42 
 43 #include "ITTrackingAction.hh"
 44 
 45 #include "G4Molecule.hh"
 46 #include "G4PhysicalConstants.hh"
 47 #include "G4SystemOfUnits.hh"
 48 #include "G4Track.hh"
 49 #include "G4UnitsTable.hh"
 50 //
 51 // #include "NeuronHitCompartments.hh"
 52 #include "Run.hh"
 53 
 54 #include "G4H2O.hh"
 55 #include "G4LogicalVolume.hh"
 56 #include "G4LogicalVolumeStore.hh"
 57 #include "G4MoleculeCounter.hh"
 58 #include "G4MoleculeGun.hh"
 59 #include "G4MoleculeTable.hh"
 60 #include "G4PhysicalVolumeStore.hh"
 61 #include "G4RunManager.hh"
 62 #include "G4VPhysicalVolume.hh"
 63 
 64 #include <G4Scheduler.hh>
 65 #include <cmath>
 66 
 67 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 68 
 69 ITTrackingAction::ITTrackingAction() : G4UserTrackingAction() {}
 70 
 71 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 72 
 73 ITTrackingAction::~ITTrackingAction() {}
 74 
 75 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 76 
 77 void ITTrackingAction::PreUserTrackingAction(const G4Track* track)
 78 {
 79   // Target volumes
 80   G4VPhysicalVolume* volumeStep = track->GetTouchableHandle()->GetVolume();
 81   G4VPhysicalVolume* volumeMedium = G4PhysicalVolumeStore::GetInstance()->GetVolume("Medium");
 82   G4VPhysicalVolume* volumeSlice = G4PhysicalVolumeStore::GetInstance()->GetVolume("BoundingSlice");
 83 
 84   // count produced species in neuron
 85   G4Molecule* molecule = GetMolecule(track);
 86   // const G4String& moleculeName = molecule->GetName();
 87   // G4double GTime  = track->GetGlobalTime() /picosecond;
 88 
 89   Run* run = static_cast<Run*>(G4RunManager::GetRunManager()->GetNonConstCurrentRun());
 90   // run->MoleculeCount(moleculeName,GTime);
 91 
 92   // time steps
 93 
 94   // particles outside neuron structure
 95   // if (volumeStep == volumeMedium || volumeStep == volumeSlice)
 96   //{
 97   // run->MoleculeCount(molecule);
 98   //}
 99   // count secondary particles in neuron
100   // else //
101   if (volumeStep != volumeMedium && volumeStep != volumeSlice) {
102     run->MoleculeCountNeuron(molecule);
103     // run->MoleculeCountNeuron(moleculeName,GTime);
104 
105     // number of molecules at time of 1 ns !
106     // if ( (GTime > T_1ns-3.) && (GTime <= T_1ns))
107     // {
108     //  if (moleculeName =="OH^0") // OH* radical
109     //  {
110     // fEventAction->MoleculeCountNeuron()
111     // G4MoleculeCounter::Instance()->GetNMoleculesAtTime(moleculeName, GTime);
112 
113     //   }
114     // }
115   }
116 }
117 
118 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
119 
120 void ITTrackingAction::PostUserTrackingAction(const G4Track* /*track*/) {}
121