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Geant4/processes/electromagnetic/dna/utils/src/G4DNADamage.cc

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Diff markup

Differences between /processes/electromagnetic/dna/utils/src/G4DNADamage.cc (Version 11.3.0) and /processes/electromagnetic/dna/utils/src/G4DNADamage.cc (Version 7.1)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 //                                                
 27 #include "G4DNADamage.hh"                         
 28 #include "G4UnitsTable.hh"                        
 29                                                   
 30 G4ThreadLocal G4DNADamage* G4DNADamage::fpInst    
 31                                                   
 32 G4DNAIndirectHit::G4DNAIndirectHit(const G4Str    
 33                                    const G4Mol    
 34                                    const G4Thr    
 35                                    G4double ti    
 36      fpMolecule(molecule)                         
 37 {                                                 
 38   fBaseName = baseName;                           
 39   fPosition = position;                           
 40   fTime = time;                                   
 41 }                                                 
 42                                                   
 43 G4DNAIndirectHit::~G4DNAIndirectHit()             
 44 {                                                 
 45   delete fpMolecule;                              
 46   fpMolecule = nullptr;                           
 47 }                                                 
 48                                                   
 49 void G4DNAIndirectHit::Print()                    
 50 {                                                 
 51   G4cout << "Reaction : " << fpMolecule->GetNa    
 52          << " at position : " << G4BestUnit(fP    
 53          << " and time : " << G4BestUnit(fTime    
 54 }                                                 
 55                                                   
 56 G4DNADamage* G4DNADamage::Instance()              
 57 {                                                 
 58   if (fpInstance == nullptr) new G4DNADamage()    
 59                                                   
 60   return fpInstance;                              
 61 }                                                 
 62                                                   
 63 G4DNADamage::G4DNADamage()                        
 64 {                                                 
 65   fJustCountDamage = false;                       
 66   fNIndirectDamage = 0;                           
 67   fpInstance = this;                              
 68 }                                                 
 69                                                   
 70 G4DNADamage::~G4DNADamage()                       
 71 {                                                 
 72   for (auto & fIndirectHit : fIndirectHits)       
 73   {                                               
 74     delete fIndirectHit;                          
 75   }                                               
 76   fIndirectHits.clear();                          
 77 }                                                 
 78                                                   
 79 void G4DNADamage::DeleteInstance()                
 80 {                                                 
 81   delete fpInstance;                              
 82   fpInstance = nullptr;                           
 83 }                                                 
 84                                                   
 85 void G4DNADamage::Reset()                         
 86 {                                                 
 87   fNIndirectDamage = 0;                           
 88   for (auto & fIndirectHit : fIndirectHits)       
 89   {                                               
 90     delete fIndirectHit;                          
 91   }                                               
 92   fIndirectHits.clear();                          
 93 }                                                 
 94                                                   
 95 void G4DNADamage::AddIndirectDamage(const G4St    
 96                                     const G4Mo    
 97                                     const G4Th    
 98                                     G4double t    
 99 {                                                 
100   if (fJustCountDamage)                           
101   {                                               
102     fNIndirectDamage++;                           
103     return;                                       
104   }                                               
105                                                   
106   G4DNAIndirectHit* indirectHit = nullptr;        
107   auto it = fMolMap.find(*molecule);              
108                                                   
109   if (it == fMolMap.cend())                       
110   {                                               
111     G4Molecule* mol(nullptr);                     
112     fMolMap[*molecule] = (mol = new G4Molecule    
113     indirectHit = new G4DNAIndirectHit(baseNam    
114   }                                               
115   else                                            
116   {                                               
117     indirectHit = new G4DNAIndirectHit(baseNam    
118   }                                               
119   fIndirectHits.push_back(indirectHit);           
120 }                                                 
121