| Geant4 Cross Reference |
1 // 1 //
2 // ******************************************* 2 // ********************************************************************
3 // * License and Disclaimer 3 // * License and Disclaimer *
4 // * 4 // * *
5 // * The Geant4 software is copyright of th 5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided 6 // * the Geant4 Collaboration. It is provided under the terms and *
7 // * conditions of the Geant4 Software License 7 // * conditions of the Geant4 Software License, included in the file *
8 // * LICENSE and available at http://cern.ch/ 8 // * LICENSE and available at http://cern.ch/geant4/license . These *
9 // * include a list of copyright holders. 9 // * include a list of copyright holders. *
10 // * 10 // * *
11 // * Neither the authors of this software syst 11 // * Neither the authors of this software system, nor their employing *
12 // * institutes,nor the agencies providing fin 12 // * institutes,nor the agencies providing financial support for this *
13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, *
14 // * regarding this software system or assum 14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file 15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitatio 16 // * for the full disclaimer and the limitation of liability. *
17 // * 17 // * *
18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you ag 21 // * any work based on the software) you agree to acknowledge its *
22 // * use in resulting scientific publicati 22 // * use in resulting scientific publications, and indicate your *
23 // * acceptance of all terms of the Geant4 Sof 23 // * acceptance of all terms of the Geant4 Software license. *
24 // ******************************************* 24 // ********************************************************************
25 // 25 //
26 // 26 //
27 #include "G4DNADamage.hh" 27 #include "G4DNADamage.hh"
28 #include "G4UnitsTable.hh" 28 #include "G4UnitsTable.hh"
29 29
30 G4ThreadLocal G4DNADamage* G4DNADamage::fpInst 30 G4ThreadLocal G4DNADamage* G4DNADamage::fpInstance(nullptr);
31 31
32 G4DNAIndirectHit::G4DNAIndirectHit(const G4Str 32 G4DNAIndirectHit::G4DNAIndirectHit(const G4String& baseName,
33 const G4Mol 33 const G4Molecule* molecule,
34 const G4Thr 34 const G4ThreeVector& position,
35 G4double ti 35 G4double time) :
36 fpMolecule(molecule) << 36 G4VDNAHit(), fpMolecule(molecule)
37 { 37 {
38 fBaseName = baseName; 38 fBaseName = baseName;
39 fPosition = position; 39 fPosition = position;
40 fTime = time; 40 fTime = time;
41 } 41 }
42 42
43 G4DNAIndirectHit::~G4DNAIndirectHit() 43 G4DNAIndirectHit::~G4DNAIndirectHit()
44 { 44 {
45 delete fpMolecule; << 45 if (fpMolecule != nullptr) delete fpMolecule;
46 fpMolecule = nullptr; 46 fpMolecule = nullptr;
47 } 47 }
48 48
49 void G4DNAIndirectHit::Print() 49 void G4DNAIndirectHit::Print()
50 { 50 {
51 G4cout << "Reaction : " << fpMolecule->GetNa 51 G4cout << "Reaction : " << fpMolecule->GetName() << " + " << fBaseName
52 << " at position : " << G4BestUnit(fP 52 << " at position : " << G4BestUnit(fPosition, "Length")
53 << " and time : " << G4BestUnit(fTime 53 << " and time : " << G4BestUnit(fTime, "Time") << G4endl;
54 } 54 }
55 55
56 G4DNADamage* G4DNADamage::Instance() 56 G4DNADamage* G4DNADamage::Instance()
57 { 57 {
58 if (fpInstance == nullptr) new G4DNADamage() 58 if (fpInstance == nullptr) new G4DNADamage();
59 59
60 return fpInstance; 60 return fpInstance;
61 } 61 }
62 62
63 G4DNADamage::G4DNADamage() 63 G4DNADamage::G4DNADamage()
64 { 64 {
65 fJustCountDamage = false; 65 fJustCountDamage = false;
66 fNIndirectDamage = 0; 66 fNIndirectDamage = 0;
67 fpInstance = this; 67 fpInstance = this;
68 } 68 }
69 69
70 G4DNADamage::~G4DNADamage() 70 G4DNADamage::~G4DNADamage()
71 { 71 {
72 for (auto & fIndirectHit : fIndirectHits) << 72 for (G4int i = 0; i < (G4int) fIndirectHits.size(); ++i)
73 { 73 {
74 delete fIndirectHit; << 74 if (fIndirectHits[i]) delete fIndirectHits[i];
75 } 75 }
76 fIndirectHits.clear(); 76 fIndirectHits.clear();
77 } 77 }
78 78
79 void G4DNADamage::DeleteInstance() 79 void G4DNADamage::DeleteInstance()
80 { 80 {
81 delete fpInstance; << 81 if (fpInstance) delete fpInstance;
82 fpInstance = nullptr; 82 fpInstance = nullptr;
83 } 83 }
84 84
85 void G4DNADamage::Reset() 85 void G4DNADamage::Reset()
86 { 86 {
87 fNIndirectDamage = 0; 87 fNIndirectDamage = 0;
88 for (auto & fIndirectHit : fIndirectHits) << 88 for (G4int i = 0; i < (G4int) fIndirectHits.size(); ++i)
89 { 89 {
90 delete fIndirectHit; << 90 if (fIndirectHits[i]) delete fIndirectHits[i];
91 } 91 }
92 fIndirectHits.clear(); 92 fIndirectHits.clear();
93 } 93 }
94 94
95 void G4DNADamage::AddIndirectDamage(const G4St 95 void G4DNADamage::AddIndirectDamage(const G4String& baseName,
96 const G4Mo 96 const G4Molecule* molecule,
97 const G4Th 97 const G4ThreeVector& position,
98 G4double t 98 G4double time)
99 { 99 {
100 if (fJustCountDamage) 100 if (fJustCountDamage)
101 { 101 {
102 fNIndirectDamage++; 102 fNIndirectDamage++;
103 return; 103 return;
104 } 104 }
105 105
106 G4DNAIndirectHit* indirectHit = nullptr; 106 G4DNAIndirectHit* indirectHit = nullptr;
107 auto it = fMolMap.find(*molecule); 107 auto it = fMolMap.find(*molecule);
108 108
109 if (it == fMolMap.cend()) 109 if (it == fMolMap.cend())
110 { 110 {
111 G4Molecule* mol(nullptr); 111 G4Molecule* mol(nullptr);
112 fMolMap[*molecule] = (mol = new G4Molecule 112 fMolMap[*molecule] = (mol = new G4Molecule(*molecule));
113 indirectHit = new G4DNAIndirectHit(baseNam 113 indirectHit = new G4DNAIndirectHit(baseName, mol, position, time);
114 } 114 }
115 else 115 else
116 { 116 {
117 indirectHit = new G4DNAIndirectHit(baseNam 117 indirectHit = new G4DNAIndirectHit(baseName, it->second, position, time);
118 } 118 }
119 fIndirectHits.push_back(indirectHit); 119 fIndirectHits.push_back(indirectHit);
120 } 120 }
121 121