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Geant4/examples/advanced/dna/moleculardna/src/BoxChromosome.cc

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Diff markup

Differences between /examples/advanced/dna/moleculardna/src/BoxChromosome.cc (Version 11.3.0) and /examples/advanced/dna/moleculardna/src/BoxChromosome.cc (Version 8.2.p1)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 //                                                
 27 /// file: BoxChromosome.cc                        
 28 /// brief: Implementation of virt chromosome c    
 29                                                   
 30 #include "BoxChromosome.hh"                       
 31                                                   
 32 #include "G4RandomDirection.hh"                   
 33 #include "Randomize.hh"                           
 34                                                   
 35 #include <utility>                                
 36                                                   
 37 //....oooOO0OOooo........oooOO0OOooo........oo    
 38                                                   
 39 const G4String BoxChromosome::fShape = "box";     
 40                                                   
 41 BoxChromosome::BoxChromosome(const G4String& n    
 42                              const G4double& y    
 43   : VirtualChromosome(name),                      
 44     fCenter(std::move(pos)),                      
 45     fXdim(xdim),                                  
 46     fYdim(ydim),                                  
 47     fZdim(zdim),                                  
 48     fRotation(G4RotationMatrix())                 
 49 {                                                 
 50   fInverseRotation = fRotation.inverse();         
 51 }                                                 
 52                                                   
 53 //....oooOO0OOooo........oooOO0OOooo........oo    
 54                                                   
 55 BoxChromosome::BoxChromosome(const G4String& n    
 56                              const G4double& y    
 57   : VirtualChromosome(name),                      
 58     fCenter(std::move(pos)),                      
 59     fXdim(xdim),                                  
 60     fYdim(ydim),                                  
 61     fZdim(zdim),                                  
 62     fRotation(std::move(rot))                     
 63 {}                                                
 64                                                   
 65 //....oooOO0OOooo........oooOO0OOooo........oo    
 66                                                   
 67 BoxChromosome::~BoxChromosome() = default;        
 68                                                   
 69 //....oooOO0OOooo........oooOO0OOooo........oo    
 70                                                   
 71 G4bool BoxChromosome::PointInChromosome(G4Thre    
 72 {                                                 
 73   G4ThreeVector rpos = pos - fCenter;             
 74   rpos = fInverseRotation(rpos);                  
 75   G4bool ok = (std::abs(rpos.getX()) <= fXdim)    
 76   ok = ok && (std::abs(rpos.getY()) <= fYdim);    
 77   ok = ok && (std::abs(rpos.getZ()) <= fZdim);    
 78   return ok;                                      
 79 }                                                 
 80                                                   
 81 //....oooOO0OOooo........oooOO0OOooo........oo    
 82                                                   
 83 G4ThreeVector BoxChromosome::RandomPointInChro    
 84 {                                                 
 85   G4ThreeVector point = G4UniformRand() * G4Ra    
 86   point.setX(point.getX() * fXdim);               
 87   point.setY(point.getY() * fYdim);               
 88   point.setZ(point.getZ() * fZdim);               
 89   return fRotation(point) + fCenter;              
 90 }                                                 
 91                                                   
 92 //....oooOO0OOooo........oooOO0OOooo........oo    
 93