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Geant4/examples/extended/medical/radiobiology/src/RBEAccumulable.cc

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 26 //
 27 /// \file radiobiology/src/RBEAccumulable.cc
 28 /// \brief Implementation of the RadioBio::RBEAccumulable class
 29 
 30 #include "RBEAccumulable.hh"
 31 
 32 #include "G4ParticleDefinition.hh"
 33 
 34 #include "Hit.hh"
 35 #include "Manager.hh"
 36 #include "RBE.hh"
 37 #include "VoxelizedSensitiveDetector.hh"
 38 #include <G4SystemOfUnits.hh>
 39 
 40 #include <tuple>
 41 
 42 namespace RadioBio
 43 {
 44 
 45 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 46 
 47 RBEAccumulable::RBEAccumulable() : VRadiobiologicalAccumulable("RBE") {}
 48 
 49 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 50 
 51 void RBEAccumulable::Merge(const G4VAccumulable& rhs)
 52 {
 53   if (GetVerboseLevel() > 1) {
 54     G4cout << "RBEAccumulable::Merge()" << G4endl;
 55   }
 56   const RBEAccumulable& other = dynamic_cast<const RBEAccumulable&>(rhs);
 57   fAlphaNumerator += other.fAlphaNumerator;
 58   fDenominator += other.fDenominator;
 59   fBetaNumerator += other.fBetaNumerator;
 60 }
 61 
 62 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 63 
 64 void RBEAccumulable::Reset()
 65 {
 66   if (GetVerboseLevel() > 0) {
 67     G4cout << "RBEAccumulable::Reset()" << G4endl;
 68   }
 69   if (fInitialized) {
 70     fAlphaNumerator = 0.0;
 71     fBetaNumerator = 0.0;
 72     fDenominator = 0.0;
 73   }
 74   else {
 75     Initialize();
 76   }
 77 }
 78 
 79 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 80 
 81 // to accumulate given the hit
 82 void RBEAccumulable::Accumulate(Hit* hit)
 83 {
 84   G4double kineticEnergy = hit->GetEkinMean();
 85   G4int A = hit->GetPartType()->GetAtomicMass();
 86   G4double energyDeposit = hit->GetDeltaE();
 87   G4double DX = hit->GetTrackLength();
 88   G4int Z = hit->GetPartType()->GetAtomicNumber();
 89   G4int i = hit->GetXindex();
 90   G4int j = hit->GetYindex();
 91   G4int k = hit->GetZindex();
 92 
 93   // If A is zero, return immediately to avoid division by zero
 94   if (!A) return;
 95 
 96   Accumulate(kineticEnergy / A, energyDeposit, DX, Z, i, j, k);
 97 }
 98 
 99 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
100 
101 void RBEAccumulable::Accumulate(G4double E, G4double energyDeposit, G4double dX, G4int Z, G4int i,
102                                 G4int j, G4int k)
103 {
104   if (!fInitialized) {
105     G4Exception("RBEAccumulable::Accumulate", "NotInitialized", FatalException,
106                 "Accumulable not initialized. Must be a programming error.");
107   }
108   if (GetVerboseLevel() > 2) {
109     G4cout << "RBEAccumulable::Accumulate() in " << i << ", " << j << ", " << k << G4endl;
110   }
111   if (energyDeposit <= 0) {
112     return;
113   }
114 
115   // Get the global voxel number for the given indexes
116   size_t n = VoxelizedSensitiveDetector::GetInstance()->GetThisVoxelNumber(i, j, k);
117 
118   // Calculate only for hadrons that traveled finite range and released finite energy.
119   if ((Z >= 1) && (dX > 0) && (E > 0)) {
120     RBE* rbe = dynamic_cast<RBE*>(Manager::GetInstance()->GetQuantity("RBE"));
121     std::tuple<G4double, G4double> alpha_beta = rbe->GetHitAlphaAndBeta(E, Z);
122     fDenominator[n] += energyDeposit;
123     fAlphaNumerator[n] += std::get<0>(alpha_beta) * energyDeposit;
124     fBetaNumerator[n] += std::sqrt(std::get<1>(alpha_beta)) * energyDeposit;
125   }
126 }
127 
128 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
129 
130 G4int RBEAccumulable::GetVerboseLevel() const
131 {
132   // Return same verbosity of RBE class
133   return Manager::GetInstance()->GetQuantity("RBE")->GetVerboseLevel();
134 }
135 
136 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
137 
138 void RBEAccumulable::Initialize()
139 {
140   if (GetVerboseLevel() > 0) {
141     G4cout << "RBEAccumulable::Initialize(): " << G4endl;
142   }
143 
144   auto voxSensDet = VoxelizedSensitiveDetector::GetInstance();
145 
146   fVoxelsAlongX = voxSensDet->GetVoxelNumberAlongX();
147   fVoxelsAlongY = voxSensDet->GetVoxelNumberAlongY();
148   fVoxelsAlongZ = voxSensDet->GetVoxelNumberAlongZ();
149   fVoxels = fVoxelsAlongX * fVoxelsAlongY * fVoxelsAlongZ;
150 
151   if (GetVerboseLevel() > 1) {
152     G4cout << fVoxels << " voxels." << G4endl;
153   }
154 
155   fAlphaNumerator = array_type(0.0, fVoxels);
156   fBetaNumerator = array_type(0.0, fVoxels);
157   fDenominator = array_type(0.0, fVoxels);
158   fInitialized = true;
159 }
160 
161 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
162 
163 }  // namespace RadioBio
164