| Geant4 Cross Reference |
1 //
2 // ********************************************************************
3 // * License and Disclaimer *
4 // * *
5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided under the terms and *
7 // * conditions of the Geant4 Software License, included in the file *
8 // * LICENSE and available at http://cern.ch/geant4/license . These *
9 // * include a list of copyright holders. *
10 // * *
11 // * Neither the authors of this software system, nor their employing *
12 // * institutes,nor the agencies providing financial support for this *
13 // * work make any representation or warranty, express or implied, *
14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitation of liability. *
17 // * *
18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you agree to acknowledge its *
22 // * use in resulting scientific publications, and indicate your *
23 // * acceptance of all terms of the Geant4 Software license. *
24 // ********************************************************************
25 //
26 //
27 // This example is provided by the Geant4-DNA collaboration
28 // DNADAMAGE2 example is derived from the chem6 example
29 // chem6 example authors: W. G. Shin and S. Incerti (CENBG, France)
30 //
31 // The code is developed in the framework of the ESA AO7146
32 //
33 // We would be very happy hearing from you, send us your feedback! :)
34 //
35 // In order for Geant4-DNA to be maintained and still open-source,
36 // article citations are crucial.
37 // If you use Geant4-DNA chemistry and you publish papers about your software,
38 // in addition to the general paper on Geant4-DNA:
39 //
40 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157–178
41 //
42 // we would be very happy if you could please also cite the following
43 // reference papers on chemistry:
44 //
45 // Authors: J. Naoki D. Kondo (UCSF, US)
46 // J. Ramos-Mendez and B. Faddegon (UCSF, US)
47 //
48 // J. Comput. Phys. 274 (2014) 841-882
49 // Prog. Nucl. Sci. Tec. 2 (2011) 503-508
50 //
51 /// \file PlasmidMolecules.hh
52 /// \brief Definition of the additional Plasmid DNA molecules
53
54 #ifndef DNADAMAGE2_PlasmidMolecules_h
55 #define DNADAMAGE2_PlasmidMolecules_h 1
56
57 #include "G4MoleculeDefinition.hh"
58 #include "G4ParticleDefinition.hh"
59 #include "G4ios.hh"
60 #include "globals.hh"
61
62 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
63
64 class G4DNA_Deoxyribose : public G4MoleculeDefinition
65 {
66 private:
67 static /*G4ThreadLocal*/ G4DNA_Deoxyribose* fDeoxyriboseInstance;
68 G4DNA_Deoxyribose() {}
69 ~G4DNA_Deoxyribose() override = default;
70
71 public:
72 static G4DNA_Deoxyribose* Definition();
73 };
74
75 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
76
77 class G4DNA_DamagedDeoxyriboseOH : public G4MoleculeDefinition
78 {
79 private:
80 static /*G4ThreadLocal*/ G4DNA_DamagedDeoxyriboseOH* fDamagedDeoxyriboseOHInstance;
81 G4DNA_DamagedDeoxyriboseOH() {}
82 ~G4DNA_DamagedDeoxyriboseOH() override = default;
83
84 public:
85 static G4DNA_DamagedDeoxyriboseOH* Definition();
86 };
87
88 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
89
90 class G4DNA_DamagedDeoxyriboseH : public G4MoleculeDefinition
91 {
92 private:
93 static /*G4ThreadLocal*/ G4DNA_DamagedDeoxyriboseH* fDamagedDeoxyriboseHInstance;
94 G4DNA_DamagedDeoxyriboseH() {}
95 ~G4DNA_DamagedDeoxyriboseH() override = default;
96
97 public:
98 static G4DNA_DamagedDeoxyriboseH* Definition();
99 };
100
101 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
102
103 class G4DNA_DamagedDeoxyriboseEAQ : public G4MoleculeDefinition
104 {
105 private:
106 static /*G4ThreadLocal*/ G4DNA_DamagedDeoxyriboseEAQ* fDamagedDeoxyriboseEAQInstance;
107 G4DNA_DamagedDeoxyriboseEAQ() {}
108 ~G4DNA_DamagedDeoxyriboseEAQ() override = default;
109
110 public:
111 static G4DNA_DamagedDeoxyriboseEAQ* Definition();
112 };
113
114 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
115
116 #endif
117