Geant4 Cross Reference

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Geant4/examples/extended/medical/dna/chem1/chem1.cc

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  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collaboration publication:
 29 // Med. Phys. 37 (2010) 4692-4708
 30 // J. Comput. Phys. 274 (2014) 841-882
 31 // The Geant4-DNA web site is available at http://geant4-dna.org
 32 //
 33 //
 34 /// \file chem1.cc
 35 /// \brief Chem1 example
 36 
 37 #include "ActionInitialization.hh"
 38 #include "CommandLineParser.hh"
 39 #include "DetectorConstruction.hh"
 40 #include "PhysicsList.hh"
 41 
 42 #include "G4DNAChemistryManager.hh"
 43 #include "G4RunManagerFactory.hh"
 44 #include "G4UIExecutive.hh"
 45 #include "G4UImanager.hh"
 46 #include "G4VisExecutive.hh"
 47 
 48 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 49 
 50 /*
 51  * WARNING : Geant4 was initially not intended for this kind of application
 52  * This code is delivered as a prototype
 53  * We will be happy to hear from you, do not hesitate to send your feedback and
 54  * communicate on the difficulties you may encounter
 55  * The user interface may change in the next releases since a reiteration of the
 56  * code has started
 57  */
 58 
 59 using namespace G4DNAPARSER;
 60 CommandLineParser* parser(0);
 61 
 62 void Parse(int& argc, char** argv);
 63 
 64 int main(int argc, char** argv)
 65 {
 66   //////////
 67   // Parse options given in commandLine
 68   //
 69   Parse(argc, argv);
 70 
 71   //////////
 72   // Construct the run manager according to whether MT is activated or not
 73   //
 74   Command* commandLine(nullptr);
 75 
 76   auto* runManager = G4RunManagerFactory::CreateRunManager();
 77   if ((commandLine = parser->GetCommandIfActive("-mt"))) {
 78     int nThreads = 2;
 79     if (commandLine->GetOption() == "NMAX") {
 80       nThreads = G4Threading::G4GetNumberOfCores();
 81     }
 82     else {
 83       nThreads = G4UIcommand::ConvertToInt(commandLine->GetOption());
 84     }
 85     runManager->SetNumberOfThreads(nThreads);
 86     G4cout << "===== Chem1 is started with " << runManager->GetNumberOfThreads()
 87            << " threads =====" << G4endl;
 88   }
 89 
 90   //////////
 91   // Set mandatory user initialization classes
 92   //
 93   DetectorConstruction* detector = new DetectorConstruction();
 94   runManager->SetUserInitialization(new PhysicsList);
 95   runManager->SetUserInitialization(detector);
 96   runManager->SetUserInitialization(new ActionInitialization());
 97 
 98   // Initialize visualization
 99   G4VisManager* visManager = nullptr;
100 
101   // Get the pointer to the User Interface manager
102   G4UImanager* UImanager = G4UImanager::GetUIpointer();
103   G4UIExecutive* ui(nullptr);
104 
105   // interactive mode : define UI session
106   if ((commandLine = parser->GetCommandIfActive("-gui"))) {
107     visManager = new G4VisExecutive;
108     visManager->Initialize();
109 
110     ui = new G4UIExecutive(argc, argv, commandLine->GetOption());
111 
112     if (parser->GetCommandIfActive("-novis") == 0) {
113       // visualization is used by default
114       if ((commandLine = parser->GetCommandIfActive("-vis"))) {
115         // select a visualization driver if needed (e.g. HepFile)
116         UImanager->ApplyCommand(G4String("/vis/open ") + commandLine->GetOption());
117       }
118       else {
119         // by default OGL is used
120         UImanager->ApplyCommand("/vis/open OGL 800x600-0+0");
121       }
122       UImanager->ApplyCommand("/control/execute vis.mac");
123     }
124 
125     if (ui->IsGUI()) {
126       UImanager->ApplyCommand("/control/execute gui.mac");
127     }
128   }
129   else if ((commandLine = parser->GetCommandIfActive("-vis"))) {
130     // to be use visualization file (= store the visualization into
131     // an external file:
132     // ASCIITree ;  DAWNFILE ; HepRepFile ; VRML(1,2)FILE ; gMocrenFile ...
133     visManager = new G4VisExecutive;
134     visManager->Initialize();
135 
136     ui = new G4UIExecutive(argc, argv, commandLine->GetOption());
137     UImanager->ApplyCommand(G4String("/vis/open ") + commandLine->GetOption());
138     UImanager->ApplyCommand("/control/execute vis.mac");
139   }
140 
141   if ((commandLine = parser->GetCommandIfActive("-mac"))) {
142     G4String command = "/control/execute ";
143     UImanager->ApplyCommand(command + commandLine->GetOption());
144   }
145   else {
146     UImanager->ApplyCommand("/control/execute beam.in");
147   }
148 
149   if (ui) {
150     ui->SessionStart();
151     delete ui;
152   }
153 
154   // Job termination
155   // Free the store: user actions, physics_list and detector_description are
156   // owned and deleted by the run manager, so they should not be deleted
157   // in the main() program !
158 
159   delete visManager;
160   delete runManager;
161 
162   CommandLineParser::DeleteInstance();
163 
164   return 0;
165 }
166 
167 void Parse(int& argc, char** argv)
168 {
169   //////////
170   // Parse options given in commandLine
171   //
172   parser = CommandLineParser::GetParser();
173 
174   parser->AddCommand("-gui", Command::OptionNotCompulsory,
175                      "Select geant4 UI or just launch a geant4 terminal session", "qt");
176 
177   parser->AddCommand("-mac", Command::WithOption, "Give a mac file to execute", "macFile.mac");
178 
179   // You cann your own command, as for instance:
180   //  parser->AddCommand("-seed",
181   //                     Command::WithOption,
182   //                     "Give a seed value in argument to be tested", "seed");
183   // it is then up to you to manage this option
184 
185   parser->AddCommand("-mt", Command::WithOption,
186                      "Launch in MT mode (events computed in parallel,"
187                      " NOT RECOMMANDED WITH CHEMISTRY)",
188                      "2");
189 
190   parser->AddCommand("-chemOFF", Command::WithoutOption, "Deactivate chemistry");
191 
192   parser->AddCommand("-vis", Command::WithOption, "Select a visualization driver",
193                      "OGL 600x600-0+0");
194 
195   parser->AddCommand("-novis", Command::WithoutOption, "Deactivate visualization when using GUI");
196 
197   //////////
198   // If -h or --help is given in option : print help and exit
199   //
200   if (parser->Parse(argc, argv) != 0)  // help is being printed
201   {
202     // if you are using ROOT, create a TApplication in this condition in order
203     // to print the help from ROOT as well
204     CommandLineParser::DeleteInstance();
205     std::exit(0);
206   }
207 
208   ///////////
209   // Kill application if wrong argument in command line
210   //
211   if (parser->CheckIfNotHandledOptionsExists(argc, argv)) {
212     // if you are using ROOT, you should initialise your TApplication
213     // before this condition
214     abort();
215   }
216 }
217