Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/DICOM/DICOM.cc

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 //
 27 /// \file medical/DICOM/DICOM.cc
 28 /// \brief Main program of the medical/DICOM example
 29 //
 30 // The code was written by :
 31 //        *Louis Archambault louis.archambault@phy.ulaval.ca,
 32 //      *Luc Beaulieu beaulieu@phy.ulaval.ca
 33 //      +Vincent Hubert-Tremblay at tigre.2@sympatico.ca
 34 //
 35 //
 36 // *Centre Hospitalier Universitaire de Quebec (CHUQ),
 37 // Hotel-Dieu de Quebec, departement de Radio-oncologie
 38 // 11 cote du palais. Quebec, QC, Canada, G1R 2J6
 39 // tel (418) 525-4444 #6720
 40 // fax (418) 691 5268
 41 //
 42 // + Université Laval, Québec (QC) Canada
 43 // *******************************************************
 44 #include "DicomActionInitialization.hh"
 45 #include "DicomNestedParamDetectorConstruction.hh"
 46 #include "DicomPartialDetectorConstruction.hh"
 47 #include "DicomRegularDetectorConstruction.hh"
 48 
 49 #include "G4GenericPhysicsList.hh"
 50 #include "G4RunManagerFactory.hh"
 51 #include "G4Types.hh"
 52 #include "G4UImanager.hh"
 53 #include "Randomize.hh"
 54 #include "globals.hh"
 55 
 56 #ifdef G4_DCMTK
 57 #  include "DicomFileMgr.hh"
 58 #else
 59 #  include "DicomHandler.hh"
 60 #endif
 61 
 62 #include "DicomIntersectVolume.hh"
 63 #include "QGSP_BIC.hh"
 64 #include "Shielding.hh"
 65 
 66 #include "G4UIExecutive.hh"
 67 #include "G4VisExecutive.hh"
 68 #include "G4tgrMessenger.hh"
 69 
 70 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 71 
 72 int main(int argc, char** argv)
 73 {
 74   // Instantiate G4UIExecutive if interactive mode
 75   G4UIExecutive* ui = nullptr;
 76   if (argc == 1) {
 77     ui = new G4UIExecutive(argc, argv);
 78   }
 79 
 80   new G4tgrMessenger;
 81   char* part = std::getenv("DICOM_PARTIAL_PARAM");
 82   G4bool bPartial = FALSE;
 83   if (part && G4String(part) == "1") {
 84     bPartial = TRUE;
 85   }
 86 
 87   CLHEP::HepRandom::setTheEngine(new CLHEP::RanecuEngine);
 88   CLHEP::HepRandom::setTheSeed(G4long(24534575684783));
 89   G4long seeds[2];
 90   seeds[0] = G4long(534524575674523);
 91   seeds[1] = G4long(526345623452457);
 92   CLHEP::HepRandom::setTheSeeds(seeds);
 93 
 94   // Construct the default run manager
 95   char* nthread_c = std::getenv("DICOM_NTHREADS");
 96 
 97   unsigned nthreads = 4;
 98   unsigned env_threads = 0;
 99 
100   if (nthread_c) {
101     env_threads = unsigned(G4UIcommand::ConvertToDouble(nthread_c));
102   }
103   if (env_threads > 0) {
104     nthreads = env_threads;
105   }
106 
107   auto* runManager = G4RunManagerFactory::CreateRunManager();
108   runManager->SetNumberOfThreads(nthreads);
109 
110   DicomDetectorConstruction* theGeometry = 0;
111 
112 #ifdef G4_DCMTK
113   DicomFileMgr* theFileMgr = 0;
114 #else
115   DicomHandler* dcmHandler = 0;
116 #endif
117 
118   if (!bPartial) {
119 #ifdef G4_DCMTK
120 
121     theFileMgr = DicomFileMgr::GetInstance();
122     theFileMgr->Convert("Data.dat");
123 
124 #else
125     // Treatment of DICOM images before creating the G4runManager
126     dcmHandler = DicomHandler::Instance();
127     dcmHandler->CheckFileFormat();
128 #endif
129 
130     // Initialisation of physics, geometry, primary particles ...
131     char* nest = std::getenv("DICOM_NESTED_PARAM");
132     if (nest && G4String(nest) == "1") {
133       theGeometry = new DicomNestedParamDetectorConstruction();
134     }
135     else {
136       theGeometry = new DicomRegularDetectorConstruction();
137     }
138   }
139   else {
140     theGeometry = new DicomPartialDetectorConstruction();
141   }
142   runManager->SetUserInitialization(theGeometry);
143 
144   //    std::vector<G4String>* MyConstr = new std::vector<G4String>;
145   //    MyConstr->push_back("G4EmStandardPhysics");
146   //    G4VModularPhysicsList* phys = new G4GenericPhysicsList(MyConstr);
147   G4VModularPhysicsList* phys = new Shielding();
148   runManager->SetUserInitialization(phys);
149 
150   // Set user action classes
151   runManager->SetUserInitialization(new DicomActionInitialization());
152 
153   runManager->Initialize();
154 
155   new DicomIntersectVolume();
156 
157   // visualisation manager
158   G4VisManager* visManager = new G4VisExecutive;
159   visManager->Initialize();
160 
161   G4UImanager* UImanager = G4UImanager::GetUIpointer();
162 
163   if (ui) {
164     UImanager->ApplyCommand("/control/execute vis.mac");
165     ui->SessionStart();
166     delete ui;
167   }
168   else {
169     G4String command = "/control/execute ";
170     G4String fileName = argv[1];
171     UImanager->ApplyCommand(command + fileName);
172   }
173 
174   delete visManager;
175   delete runManager;
176 
177   if (!bPartial) {
178 #ifdef G4_DCMTK
179     delete theFileMgr;
180 #endif
181   }
182 
183   return 0;
184 }
185