Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/advanced/dna/moleculardna/src/DamageModel.cc

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 26 //
 27 /// file: DamageModel.cc
 28 /// brief: Parameters related to the DNA Damage model
 29 
 30 #include "DamageModel.hh"
 31 
 32 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 33 
 34 DamageModel::DamageModel()
 35 {
 36   fpDamageMessenger = new DamageModelMessenger(this);
 37 }
 38 
 39 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 40 
 41 G4bool DamageModel::IsDirectStrandBreak(const G4double& d) const
 42 {
 43   G4bool bool_val = false;
 44   if (d < fDirectDmgLower) {
 45     bool_val = false;
 46   }
 47   else if (d >= fDirectDmgUpper) {
 48     bool_val = true;
 49   }
 50   else {
 51     bool_val = (G4UniformRand() < ((d - fDirectDmgLower) / (fDirectDmgUpper - fDirectDmgLower)));
 52   }
 53   return bool_val;
 54 }
 55 
 56 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 57 
 58 G4bool DamageModel::IsIndirectBaseDamage(const G4MolecularConfiguration* mol) const
 59 {
 60   G4bool bool_val = false;
 61   if (mol->GetDefinition() == fOH) {
 62     bool_val = (G4UniformRand() < fBaseOH);
 63   }
 64   else if (mol->GetDefinition() == fH) {
 65     bool_val = (G4UniformRand() < fBaseH);
 66   }
 67   else if (mol->GetDefinition() == fe_aq) {
 68     bool_val = (G4UniformRand() < fBaseEaq);
 69   }
 70   else {
 71     bool_val = false;
 72   }
 73   return bool_val;
 74 }
 75 
 76 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 77 
 78 G4bool DamageModel::IsIndirectStrandDamage(const G4MolecularConfiguration* mol) const
 79 {
 80   G4bool bool_val = false;
 81   if (mol->GetDefinition() == fOH) {
 82     bool_val = (G4UniformRand() < fStrandOH);
 83   }
 84   else if (mol->GetDefinition() == G4Hydrogen::Definition()) {
 85     bool_val = (G4UniformRand() < fStrandH);
 86   }
 87   else if (mol->GetDefinition() == G4Electron_aq::Definition()) {
 88     bool_val = (G4UniformRand() < fStrandEaq);
 89   }
 90   else {
 91     bool_val = false;
 92   }
 93   return bool_val;
 94 }
 95 
 96 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 97 
 98 G4bool DamageModel::IsInducedStrandBreak(const G4MolecularConfiguration* mol) const
 99 {
100   G4bool bool_val = false;
101   if (mol->GetDefinition() == fOH) {
102     bool_val = (G4UniformRand() < fInductionOH);
103   }
104   else if (mol->GetDefinition() == G4Hydrogen::Definition()) {
105     bool_val = (G4UniformRand() < fInductionH);
106   }
107   else if (mol->GetDefinition() == G4Electron_aq::Definition()) {
108     bool_val = (G4UniformRand() < fInductionEaq);
109   }
110   else {
111     bool_val = false;
112   }
113   return bool_val;
114 }
115 
116 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
117 
118 void DamageModel::CheckValidProbability(const G4String& str, G4double p)
119 {
120   if ((p < 0) || (p > 1)) {
121     G4ExceptionDescription errmsg;
122     errmsg << "Invalid probability for " << str;
123     G4Exception("DamageModel", "ERR_INVALID_PROB", FatalException, errmsg);
124   }
125 }