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1 // 2 // ******************************************************************** 3 // * License and Disclaimer * 4 // * * 5 // * The Geant4 software is copyright of the Copyright Holders of * 6 // * the Geant4 Collaboration. It is provided under the terms and * 7 // * conditions of the Geant4 Software License, included in the file * 8 // * LICENSE and available at http://cern.ch/geant4/license . These * 9 // * include a list of copyright holders. * 10 // * * 11 // * Neither the authors of this software system, nor their employing * 12 // * institutes,nor the agencies providing financial support for this * 13 // * work make any representation or warranty, express or implied, * 14 // * regarding this software system or assume any liability for its * 15 // * use. Please see the license in the file LICENSE and URL above * 16 // * for the full disclaimer and the limitation of liability. * 17 // * * 18 // * This code implementation is the result of the scientific and * 19 // * technical work of the GEANT4 collaboration. * 20 // * By using, copying, modifying or distributing the software (or * 21 // * any work based on the software) you agree to acknowledge its * 22 // * use in resulting scientific publications, and indicate your * 23 // * acceptance of all terms of the Geant4 Software license. * 24 // ******************************************************************** 25 // 26 // 27 /// file: DamageModel.hh 28 /// brief: Parameters related to the DNA Damage model 29 #ifndef MOLECULAR_DAMAGE_MODEL 30 #define MOLECULAR_DAMAGE_MODEL 31 32 #include "DamageModelMessenger.hh" 33 34 #include "G4Electron_aq.hh" 35 #include "G4Hydrogen.hh" 36 #include "G4MolecularConfiguration.hh" 37 #include "G4OH.hh" 38 #include "G4SystemOfUnits.hh" 39 #include "Randomize.hh" 40 #include "globals.hh" 41 42 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 43 44 class DamageModel 45 { 46 public: 47 DamageModel(); 48 49 virtual ~DamageModel() { delete fpDamageMessenger; }; 50 51 // methods 52 G4bool IsDirectStrandBreak(const G4double&) const; 53 54 G4bool IsIndirectStrandDamage(const G4MolecularConfiguration*) const; 55 56 G4bool IsIndirectBaseDamage(const G4MolecularConfiguration*) const; 57 58 G4bool IsInducedStrandBreak(const G4MolecularConfiguration*) const; 59 60 // setters 61 void SetDirectDamageLower(G4double d) 62 { 63 fDirectDmgLower = d; 64 if (fDirectDmgLower < fDirectDmgUpper) fDirectDmgUpper = fDirectDmgLower; 65 }; 66 67 void SetDirectDamageUpper(G4double d) 68 { 69 fDirectDmgUpper = d; 70 if (fDirectDmgLower > fDirectDmgUpper) fDirectDmgLower = fDirectDmgUpper; 71 }; 72 73 // Indirect OH 74 void SetIndirectOHStrandChance(G4double d) 75 { 76 CheckValidProbability("DamageStrandOH", d); 77 fStrandOH = d; 78 } 79 80 void SetIndirectOHBaseChance(G4double d) 81 { 82 CheckValidProbability("DamageBaseOH", d); 83 fBaseOH = d; 84 } 85 86 void SetInductionOHChance(G4double d) 87 { 88 CheckValidProbability("InductionOH", d); 89 fInductionOH = d; 90 }; 91 92 // Indirect Eaq 93 void SetIndirectEaqStrandChance(G4double d) 94 { 95 CheckValidProbability("DamageStrandEaq", d); 96 fStrandEaq = d; 97 } 98 99 void SetIndirectEaqBaseChance(G4double d) 100 { 101 CheckValidProbability("DamageBaseEaq", d); 102 fBaseEaq = d; 103 } 104 105 void SetInductionEaqChance(G4double d) 106 { 107 CheckValidProbability("InductionEaq", d); 108 fInductionEaq = d; 109 }; 110 111 // Indirect H 112 void SetIndirectHStrandChance(G4double d) 113 { 114 CheckValidProbability("DamageStrandH", d); 115 fStrandH = d; 116 } 117 118 void SetIndirectHBaseChance(G4double d) 119 { 120 CheckValidProbability("DamageBaseH", d); 121 fBaseH = d; 122 } 123 124 void SetInductionHChance(G4double d) 125 { 126 CheckValidProbability("InductionH", d); 127 fInductionH = d; 128 }; 129 130 protected: 131 static void CheckValidProbability(const G4String& str, G4double p); 132 133 private: 134 DamageModelMessenger* fpDamageMessenger; 135 G4double fDirectDmgLower = 17.5 * eV, fDirectDmgUpper = 17.5 * eV; 136 G4double fInductionOH = 0, fInductionEaq = 0, fInductionH = 0; 137 G4double fStrandOH = 1.0, fStrandEaq = 1.0, fStrandH = 1.0; 138 G4double fBaseOH = 1.0, fBaseEaq = 1.0, fBaseH = 1.0; 139 const G4MoleculeDefinition* fOH = G4OH::Definition(); 140 const G4MoleculeDefinition* fe_aq = G4Electron_aq::Definition(); 141 const G4MoleculeDefinition* fH = G4Hydrogen::Definition(); 142 }; 143 144 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 145 146 #endif // MOLECULAR_DAMAGE_MODEL 147