Geant4 Cross Reference

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Geant4/examples/advanced/dna/moleculardna/include/DamageModel.hh

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 26 //
 27 /// file: DamageModel.hh
 28 /// brief: Parameters related to the DNA Damage model
 29 #ifndef MOLECULAR_DAMAGE_MODEL
 30 #define MOLECULAR_DAMAGE_MODEL
 31 
 32 #include "DamageModelMessenger.hh"
 33 
 34 #include "G4Electron_aq.hh"
 35 #include "G4Hydrogen.hh"
 36 #include "G4MolecularConfiguration.hh"
 37 #include "G4OH.hh"
 38 #include "G4SystemOfUnits.hh"
 39 #include "Randomize.hh"
 40 #include "globals.hh"
 41 
 42 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 43 
 44 class DamageModel
 45 {
 46   public:
 47     DamageModel();
 48 
 49     virtual ~DamageModel() { delete fpDamageMessenger; };
 50 
 51     // methods
 52     G4bool IsDirectStrandBreak(const G4double&) const;
 53 
 54     G4bool IsIndirectStrandDamage(const G4MolecularConfiguration*) const;
 55 
 56     G4bool IsIndirectBaseDamage(const G4MolecularConfiguration*) const;
 57 
 58     G4bool IsInducedStrandBreak(const G4MolecularConfiguration*) const;
 59 
 60     // setters
 61     void SetDirectDamageLower(G4double d)
 62     {
 63       fDirectDmgLower = d;
 64       if (fDirectDmgLower < fDirectDmgUpper) fDirectDmgUpper = fDirectDmgLower;
 65     };
 66 
 67     void SetDirectDamageUpper(G4double d)
 68     {
 69       fDirectDmgUpper = d;
 70       if (fDirectDmgLower > fDirectDmgUpper) fDirectDmgLower = fDirectDmgUpper;
 71     };
 72 
 73     // Indirect OH
 74     void SetIndirectOHStrandChance(G4double d)
 75     {
 76       CheckValidProbability("DamageStrandOH", d);
 77       fStrandOH = d;
 78     }
 79 
 80     void SetIndirectOHBaseChance(G4double d)
 81     {
 82       CheckValidProbability("DamageBaseOH", d);
 83       fBaseOH = d;
 84     }
 85 
 86     void SetInductionOHChance(G4double d)
 87     {
 88       CheckValidProbability("InductionOH", d);
 89       fInductionOH = d;
 90     };
 91 
 92     // Indirect Eaq
 93     void SetIndirectEaqStrandChance(G4double d)
 94     {
 95       CheckValidProbability("DamageStrandEaq", d);
 96       fStrandEaq = d;
 97     }
 98 
 99     void SetIndirectEaqBaseChance(G4double d)
100     {
101       CheckValidProbability("DamageBaseEaq", d);
102       fBaseEaq = d;
103     }
104 
105     void SetInductionEaqChance(G4double d)
106     {
107       CheckValidProbability("InductionEaq", d);
108       fInductionEaq = d;
109     };
110 
111     // Indirect H
112     void SetIndirectHStrandChance(G4double d)
113     {
114       CheckValidProbability("DamageStrandH", d);
115       fStrandH = d;
116     }
117 
118     void SetIndirectHBaseChance(G4double d)
119     {
120       CheckValidProbability("DamageBaseH", d);
121       fBaseH = d;
122     }
123 
124     void SetInductionHChance(G4double d)
125     {
126       CheckValidProbability("InductionH", d);
127       fInductionH = d;
128     };
129 
130   protected:
131     static void CheckValidProbability(const G4String& str, G4double p);
132 
133   private:
134     DamageModelMessenger* fpDamageMessenger;
135     G4double fDirectDmgLower = 17.5 * eV, fDirectDmgUpper = 17.5 * eV;
136     G4double fInductionOH = 0, fInductionEaq = 0, fInductionH = 0;
137     G4double fStrandOH = 1.0, fStrandEaq = 1.0, fStrandH = 1.0;
138     G4double fBaseOH = 1.0, fBaseEaq = 1.0, fBaseH = 1.0;
139     const G4MoleculeDefinition* fOH = G4OH::Definition();
140     const G4MoleculeDefinition* fe_aq = G4Electron_aq::Definition();
141     const G4MoleculeDefinition* fH = G4Hydrogen::Definition();
142 };
143 
144 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
145 
146 #endif  // MOLECULAR_DAMAGE_MODEL
147