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24 // 24 //
25 // 25 //
26 // Author: HoangTRAN, 20/2/2019 26 // Author: HoangTRAN, 20/2/2019
27 #include "G4DNABoundingBox.hh" 27 #include "G4DNABoundingBox.hh"
28 #include <array> 28 #include <array>
29 #include "G4UnitsTable.hh" 29 #include "G4UnitsTable.hh"
30 using std::array; 30 using std::array;
31 using std::initializer_list; 31 using std::initializer_list;
32 //....oooOO0OOooo........oooOO0OOooo........oo 32 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
33 33
34 G4DNABoundingBox::G4DNABoundingBox(G4DNABoundi 34 G4DNABoundingBox::G4DNABoundingBox(G4DNABoundingBox&& rhs) noexcept
35 { 35 {
36 fxhi = rhs.fxhi; 36 fxhi = rhs.fxhi;
37 fxlo = rhs.fxlo; 37 fxlo = rhs.fxlo;
38 fyhi = rhs.fyhi; 38 fyhi = rhs.fyhi;
39 fylo = rhs.fylo; 39 fylo = rhs.fylo;
40 fzhi = rhs.fzhi; 40 fzhi = rhs.fzhi;
41 fzlo = rhs.fzlo; 41 fzlo = rhs.fzlo;
42 } 42 }
43 ////....oooOO0OOooo........oooOO0OOooo........ 43 ////....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
44 44
45 G4DNABoundingBox::G4DNABoundingBox(const initi 45 G4DNABoundingBox::G4DNABoundingBox(const initializer_list<G4double>& l)
46 { 46 {
47 fxhi = 0.; 47 fxhi = 0.;
48 fxlo = 0.; 48 fxlo = 0.;
49 fyhi = 0.; 49 fyhi = 0.;
50 fylo = 0.; 50 fylo = 0.;
51 fzhi = 0.; 51 fzhi = 0.;
52 fzlo = 0.; 52 fzlo = 0.;
53 std::copy(l.begin(), l.end(), &fxhi); 53 std::copy(l.begin(), l.end(), &fxhi);
54 } 54 }
55 55
56 //....oooOO0OOooo........oooOO0OOooo........oo 56 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
57 57
58 G4DNABoundingBox& G4DNABoundingBox::operator=( 58 G4DNABoundingBox& G4DNABoundingBox::operator=(G4DNABoundingBox&& rhs) noexcept
59 { 59 {
60 fxhi = rhs.fxhi; 60 fxhi = rhs.fxhi;
61 fxlo = rhs.fxlo; 61 fxlo = rhs.fxlo;
62 fyhi = rhs.fyhi; 62 fyhi = rhs.fyhi;
63 fylo = rhs.fylo; 63 fylo = rhs.fylo;
64 fzhi = rhs.fzhi; 64 fzhi = rhs.fzhi;
65 fzlo = rhs.fzlo; 65 fzlo = rhs.fzlo;
66 return *this; 66 return *this;
67 } 67 }
68 68
69 G4double G4DNABoundingBox::Volume() const 69 G4double G4DNABoundingBox::Volume() const
70 { 70 {
71 auto LengthY = this->Getyhi() - this->Getylo 71 auto LengthY = this->Getyhi() - this->Getylo();
72 auto LengthX = this->Getxhi() - this->Getxlo 72 auto LengthX = this->Getxhi() - this->Getxlo();
73 auto LengthZ = this->Getzhi() - this->Getzlo 73 auto LengthZ = this->Getzhi() - this->Getzlo();
74 G4double V = LengthY * LengthX * LengthZ; 74 G4double V = LengthY * LengthX * LengthZ;
75 return V; 75 return V;
76 } 76 }
77 77
78 //....oooOO0OOooo........oooOO0OOooo........oo 78 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
79 79
80 void G4DNABoundingBox::resize(G4ThreeVector pi 80 void G4DNABoundingBox::resize(G4ThreeVector pics[8])
81 { 81 {
82 for(size_t i = 0; i < 8; i++) 82 for(size_t i = 0; i < 8; i++)
83 { 83 {
84 const G4ThreeVector& point = pics[i]; 84 const G4ThreeVector& point = pics[i];
85 if(point.x() < fxlo) 85 if(point.x() < fxlo)
86 { 86 {
87 fxlo = point.x(); 87 fxlo = point.x();
88 } 88 }
89 if(point.x() > fxhi) 89 if(point.x() > fxhi)
90 { 90 {
91 fxhi = point.x(); 91 fxhi = point.x();
92 } 92 }
93 93
94 if(point.y() < fylo) 94 if(point.y() < fylo)
95 { 95 {
96 fylo = point.y(); 96 fylo = point.y();
97 } 97 }
98 if(point.y() > fyhi) 98 if(point.y() > fyhi)
99 { 99 {
100 fyhi = point.y(); 100 fyhi = point.y();
101 } 101 }
102 102
103 if(point.z() < fzlo) 103 if(point.z() < fzlo)
104 { 104 {
105 fzlo = point.z(); 105 fzlo = point.z();
106 } 106 }
107 if(point.z() > fzhi) 107 if(point.z() > fzhi)
108 { 108 {
109 fzhi = point.z(); 109 fzhi = point.z();
110 } 110 }
111 } 111 }
112 } 112 }
113 113
114 //-------------------------------------------- 114 //------------------------------------------------------------------------------
115 115
116 G4DNABoundingBox G4DNABoundingBox::translate(c 116 G4DNABoundingBox G4DNABoundingBox::translate(const G4ThreeVector& trans) const
117 { 117 {
118 G4DNABoundingBox output; 118 G4DNABoundingBox output;
119 119
120 output.fxhi = fxhi + trans.x(); 120 output.fxhi = fxhi + trans.x();
121 output.fxlo = fxlo + trans.x(); 121 output.fxlo = fxlo + trans.x();
122 122
123 output.fyhi = fyhi + trans.y(); 123 output.fyhi = fyhi + trans.y();
124 output.fylo = fylo + trans.x(); 124 output.fylo = fylo + trans.x();
125 125
126 output.fzhi = fzhi + trans.z(); 126 output.fzhi = fzhi + trans.z();
127 output.fzlo = fzlo + trans.z(); 127 output.fzlo = fzlo + trans.z();
128 128
129 return output; 129 return output;
130 } 130 }
131 //....oooOO0OOooo........oooOO0OOooo........oo 131 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
132 132
133 G4bool G4DNABoundingBox::contains(const G4DNAB 133 G4bool G4DNABoundingBox::contains(const G4DNABoundingBox& other) const
134 { 134 {
135 return fxlo <= other.fxlo && fxhi >= other.f 135 return fxlo <= other.fxlo && fxhi >= other.fxhi && fylo <= other.fylo &&
136 fyhi >= other.fyhi && fzlo <= other.f 136 fyhi >= other.fyhi && fzlo <= other.fzlo && fzhi >= other.fzhi;
137 } 137 }
138 138
139 //....oooOO0OOooo........oooOO0OOooo........oo 139 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
140 140
141 G4bool G4DNABoundingBox::contains(const G4Thre 141 G4bool G4DNABoundingBox::contains(const G4ThreeVector& point) const
142 { 142 {
143 return fxlo <= point.x() && fxhi >= point.x( 143 return fxlo <= point.x() && fxhi >= point.x() && fylo <= point.y() &&
144 fyhi >= point.y() && fzlo <= point.z( 144 fyhi >= point.y() && fzlo <= point.z() && fzhi >= point.z();
145 } 145 }
146 146
147 //....oooOO0OOooo........oooOO0OOooo........oo 147 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
148 148
149 G4bool G4DNABoundingBox::overlap(const G4DNABo 149 G4bool G4DNABoundingBox::overlap(const G4DNABoundingBox& other,
150 G4DNABounding 150 G4DNABoundingBox* out) const
151 { 151 {
152 if(contains(other)) 152 if(contains(other))
153 { 153 {
154 *out = other; 154 *out = other;
155 return true; 155 return true;
156 } 156 }
157 if(other.contains(*this)) << 157 else if(other.contains(*this))
158 { 158 {
159 *out = *this; 159 *out = *this;
160 return true; 160 return true;
161 } 161 }
162 162
163 // Check if there is no intersection 163 // Check if there is no intersection
164 if(fxhi < other.fxlo || fxlo > other.fxhi || 164 if(fxhi < other.fxlo || fxlo > other.fxhi || fyhi < other.fylo ||
165 fylo > other.fyhi || fzhi < other.fzlo || 165 fylo > other.fyhi || fzhi < other.fzlo || fzlo > other.fzhi)
166 { 166 {
167 *out = invalid; 167 *out = invalid;
168 return false; 168 return false;
169 } 169 }
170 170
171 G4double upperX = std::min(fxhi, other.fxhi) 171 G4double upperX = std::min(fxhi, other.fxhi);
172 G4double upperY = std::min(fyhi, other.fyhi) 172 G4double upperY = std::min(fyhi, other.fyhi);
173 G4double upperZ = std::min(fzhi, other.fzhi) 173 G4double upperZ = std::min(fzhi, other.fzhi);
174 174
175 G4double lowerX = std::max(fxlo, other.fxlo) 175 G4double lowerX = std::max(fxlo, other.fxlo);
176 G4double lowerY = std::max(fylo, other.fylo) 176 G4double lowerY = std::max(fylo, other.fylo);
177 G4double lowerZ = std::max(fzlo, other.fzlo) 177 G4double lowerZ = std::max(fzlo, other.fzlo);
178 178
179 *out = G4DNABoundingBox{ upperX, lowerX, upp 179 *out = G4DNABoundingBox{ upperX, lowerX, upperY, lowerY, upperZ, lowerZ };
180 return true; 180 return true;
181 } 181 }
182 182
183 //....oooOO0OOooo........oooOO0OOooo........oo 183 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
184 184
185 G4bool G4DNABoundingBox::overlap(const G4Three 185 G4bool G4DNABoundingBox::overlap(const G4ThreeVector& query,
186 const G4doubl 186 const G4double& Radius) const
187 { 187 {
188 G4double x = query.x() - this->middlePoint() 188 G4double x = query.x() - this->middlePoint().x();
189 G4double y = query.y() - this->middlePoint() 189 G4double y = query.y() - this->middlePoint().y();
190 G4double z = query.z() - this->middlePoint() 190 G4double z = query.z() - this->middlePoint().z();
191 191
192 x = std::abs(x); 192 x = std::abs(x);
193 y = std::abs(y); 193 y = std::abs(y);
194 z = std::abs(z); 194 z = std::abs(z);
195 195
196 if((x > (Radius + this->halfSideLengthInX()) 196 if((x > (Radius + this->halfSideLengthInX())) ||
197 (y > (Radius + this->halfSideLengthInY()) 197 (y > (Radius + this->halfSideLengthInY())) ||
198 (z > (Radius + this->halfSideLengthInZ()) 198 (z > (Radius + this->halfSideLengthInZ())))
199 { 199 {
200 return false; // 200 return false; //
201 } 201 }
202 G4int num_less_extent = static_cast<int>(x < << 202 G4int num_less_extent = (x < this->halfSideLengthInX()) +
203 static_cast<int>(y < << 203 (y < this->halfSideLengthInY()) +
204 static_cast<int>(z < << 204 (z < this->halfSideLengthInZ());
205 205
206 if(num_less_extent > 1) 206 if(num_less_extent > 1)
207 { 207 {
208 return true; 208 return true;
209 } 209 }
210 210
211 x = std::max(x - this->halfSideLengthInX(), 211 x = std::max(x - this->halfSideLengthInX(), 0.0);
212 y = std::max(y - this->halfSideLengthInY(), 212 y = std::max(y - this->halfSideLengthInY(), 0.0);
213 z = std::max(z - this->halfSideLengthInZ(), 213 z = std::max(z - this->halfSideLengthInZ(), 0.0);
214 214
215 G4double norm = std::sqrt(x * x + y * y + z 215 G4double norm = std::sqrt(x * x + y * y + z * z);
216 216
217 return (norm < Radius); 217 return (norm < Radius);
218 } 218 }
219 //....oooOO0OOooo........oooOO0OOooo........oo 219 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
220 220
221 G4bool G4DNABoundingBox::contains(const G4Thre 221 G4bool G4DNABoundingBox::contains(const G4ThreeVector& query,
222 const G4doub 222 const G4double& Radius) const
223 { 223 {
224 G4ThreeVector temp = query - this->middlePoi 224 G4ThreeVector temp = query - this->middlePoint();
225 G4double x = std::abs(temp.x()) + th 225 G4double x = std::abs(temp.x()) + this->halfSideLengthInX();
226 G4double y = std::abs(temp.y()) + th 226 G4double y = std::abs(temp.y()) + this->halfSideLengthInY();
227 G4double z = std::abs(temp.z()) + th 227 G4double z = std::abs(temp.z()) + this->halfSideLengthInZ();
228 G4double norm = std::sqrt(x * x + y * y 228 G4double norm = std::sqrt(x * x + y * y + z * z);
229 return (norm < Radius); 229 return (norm < Radius);
230 } 230 }
231 //....oooOO0OOooo........oooOO0OOooo........oo 231 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
232 232
233 G4bool G4DNABoundingBox::contains(const G4Thre 233 G4bool G4DNABoundingBox::contains(const G4ThreeVector& query,
234 const G4Thre 234 const G4ThreeVector& Point,
235 const G4doub 235 const G4double& Radius) const
236 { 236 {
237 return (((query - Point).mag()) < Radius); 237 return (((query - Point).mag()) < Radius);
238 } 238 }
239 239
240 //....oooOO0OOooo........oooOO0OOooo........oo 240 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
241 241
242 array<G4DNABoundingBox, 8> G4DNABoundingBox::p 242 array<G4DNABoundingBox, 8> G4DNABoundingBox::partition() const
243 { 243 {
244 G4double xmid = (fxhi + fxlo) / 2.; 244 G4double xmid = (fxhi + fxlo) / 2.;
245 G4double ymid = (fyhi + fylo) / 2.; 245 G4double ymid = (fyhi + fylo) / 2.;
246 G4double zmid = (fzhi + fzlo) / 2.; 246 G4double zmid = (fzhi + fzlo) / 2.;
247 247
248 std::array<G4DNABoundingBox, 8> ret{ { 248 std::array<G4DNABoundingBox, 8> ret{ {
249 G4DNABoundingBox{ xmid, fxlo, ymid, fylo, 249 G4DNABoundingBox{ xmid, fxlo, ymid, fylo, zmid,
250 fzlo }, // bottom left 250 fzlo }, // bottom left front
251 G4DNABoundingBox{ fxhi, xmid, ymid, fylo, 251 G4DNABoundingBox{ fxhi, xmid, ymid, fylo, zmid,
252 fzlo }, // bottom right 252 fzlo }, // bottom right front
253 G4DNABoundingBox{ xmid, fxlo, fyhi, ymid, 253 G4DNABoundingBox{ xmid, fxlo, fyhi, ymid, zmid, fzlo }, // bottom left back
254 G4DNABoundingBox{ fxhi, xmid, fyhi, ymid, 254 G4DNABoundingBox{ fxhi, xmid, fyhi, ymid, zmid,
255 fzlo }, // bottom right 255 fzlo }, // bottom right back
256 G4DNABoundingBox{ xmid, fxlo, ymid, fylo, 256 G4DNABoundingBox{ xmid, fxlo, ymid, fylo, fzhi, zmid }, // top left front
257 G4DNABoundingBox{ fxhi, xmid, ymid, fylo, 257 G4DNABoundingBox{ fxhi, xmid, ymid, fylo, fzhi, zmid }, // top right front
258 G4DNABoundingBox{ xmid, fxlo, fyhi, ymid, 258 G4DNABoundingBox{ xmid, fxlo, fyhi, ymid, fzhi, zmid }, // top left back
259 G4DNABoundingBox{ fxhi, xmid, fyhi, ymid, 259 G4DNABoundingBox{ fxhi, xmid, fyhi, ymid, fzhi, zmid } // top right back
260 } }; 260 } };
261 return ret; 261 return ret;
262 } 262 }
263 //....oooOO0OOooo........oooOO0OOooo........oo 263 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
264 264
265 G4bool G4DNABoundingBox::operator==(const G4DN 265 G4bool G4DNABoundingBox::operator==(const G4DNABoundingBox& rhs) const
266 { 266 {
267 return (fxhi == rhs.fxhi && fxlo == rhs.fxlo 267 return (fxhi == rhs.fxhi && fxlo == rhs.fxlo && fyhi == rhs.fyhi &&
268 fylo == rhs.fylo && fzhi == rhs.fzhi 268 fylo == rhs.fylo && fzhi == rhs.fzhi && fzlo == rhs.fzlo) ||
269 (std::isnan(fxhi) && std::isnan(rhs.f 269 (std::isnan(fxhi) && std::isnan(rhs.fxhi) && std::isnan(fxlo) &&
270 std::isnan(rhs.fxlo) && std::isnan(f 270 std::isnan(rhs.fxlo) && std::isnan(fyhi) && std::isnan(rhs.fyhi) &&
271 std::isnan(fylo) && std::isnan(rhs.f 271 std::isnan(fylo) && std::isnan(rhs.fylo) && std::isnan(fzhi) &&
272 std::isnan(rhs.fzhi) && std::isnan(f 272 std::isnan(rhs.fzhi) && std::isnan(fzlo) && std::isnan(rhs.fzlo));
273 } 273 }
274 274
275 G4bool G4DNABoundingBox::operator!=(const G4DN 275 G4bool G4DNABoundingBox::operator!=(const G4DNABoundingBox& rhs) const
276 { 276 {
277 return !operator==(rhs); 277 return !operator==(rhs);
278 } 278 }
279 //....oooOO0OOooo........oooOO0OOooo........oo 279 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
280 280
281 std::ostream& operator<<(std::ostream& stream, 281 std::ostream& operator<<(std::ostream& stream, const G4DNABoundingBox& rhs)
282 { 282 {
283 stream << "{" << G4BestUnit(rhs.fxhi, "Lengt 283 stream << "{" << G4BestUnit(rhs.fxhi, "Length") << ", "
284 << G4BestUnit(rhs.fxlo, "Length") << 284 << G4BestUnit(rhs.fxlo, "Length") << ", "
285 << G4BestUnit(rhs.fyhi, "Length") << 285 << G4BestUnit(rhs.fyhi, "Length") << ", "
286 << G4BestUnit(rhs.fylo, "Length") << 286 << G4BestUnit(rhs.fylo, "Length") << ", "
287 << G4BestUnit(rhs.fzhi, "Length") << 287 << G4BestUnit(rhs.fzhi, "Length") << ", "
288 << G4BestUnit(rhs.fzlo, "Length") << 288 << G4BestUnit(rhs.fzlo, "Length") << ", "
289 << "}"; 289 << "}";
290 return stream; 290 return stream;
291 } 291 }
292 292