Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/spower/src/Run.cc

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

Diff markup

Differences between /examples/extended/medical/dna/spower/src/Run.cc (Version 11.3.0) and /examples/extended/medical/dna/spower/src/Run.cc (Version 11.0.p2)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 // This example is provided by the Geant4-DNA  << 
 27 // Any report or published results obtained us << 
 28 // shall cite the following Geant4-DNA collabo << 
 29 // Med. Phys. 45 (2018) e722-e739              << 
 30 // Phys. Med. 31 (2015) 861-874                << 
 31 // Med. Phys. 37 (2010) 4692-4708              << 
 32 // Int. J. Model. Simul. Sci. Comput. 1 (2010) << 
 33 //                                             << 
 34 // The Geant4-DNA web site is available at htt << 
 35 //                                             << 
 36 /// \file Run.cc                                   26 /// \file Run.cc
 37 /// \brief Implementation of the Run class         27 /// \brief Implementation of the Run class
 38                                                    28 
 39 #include "Run.hh"                                  29 #include "Run.hh"
 40                                                << 
 41 #include "DetectorConstruction.hh"                 30 #include "DetectorConstruction.hh"
 42 #include "PrimaryGeneratorAction.hh"               31 #include "PrimaryGeneratorAction.hh"
 43                                                    32 
 44 #include "G4Material.hh"                           33 #include "G4Material.hh"
 45 #include "G4SystemOfUnits.hh"                      34 #include "G4SystemOfUnits.hh"
 46 #include "G4UnitsTable.hh"                         35 #include "G4UnitsTable.hh"
 47                                                    36 
 48 //....oooOO0OOooo........oooOO0OOooo........oo     37 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 49                                                    38 
 50 Run::Run(const DetectorConstruction* detector)     39 Run::Run(const DetectorConstruction* detector)
 51   : G4Run(), fDetector(detector), fParticle(0) <<  40 : G4Run(),
                                                   >>  41   fDetector(detector),
                                                   >>  42   fParticle(0), fEkin(0.),  
                                                   >>  43   fSP(0.),  fSP2(0.)
 52 {}                                                 44 {}
 53                                                    45 
 54 //....oooOO0OOooo........oooOO0OOooo........oo     46 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 55                                                    47 
 56 Run::~Run() {}                                 <<  48 Run::~Run()
                                                   >>  49 {}
 57                                                    50 
 58 //....oooOO0OOooo........oooOO0OOooo........oo     51 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 59                                                    52 
 60 void Run::SetPrimary(G4ParticleDefinition* par <<  53 void Run::SetPrimary (G4ParticleDefinition* particle, G4double energy)
 61 {                                              <<  54 { 
 62   fParticle = particle;                            55   fParticle = particle;
 63   fEkin = energy;                              <<  56   fEkin     = energy;
 64 }                                                  57 }
 65                                                    58 
 66 //....oooOO0OOooo........oooOO0OOooo........oo     59 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 67                                                <<  60     
 68 void Run::AddSP(G4double t)                    <<  61 void Run::AddSP (G4double t) 
 69 {                                                  62 {
 70   fSP += t;                                    <<  63   fSP  += t;
 71   fSP2 += t * t;                               <<  64   fSP2 += t*t;
 72 }                                                  65 }
 73                                                    66 
 74 //....oooOO0OOooo........oooOO0OOooo........oo     67 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 75                                                    68 
 76 void Run::Merge(const G4Run* run)                  69 void Run::Merge(const G4Run* run)
 77 {                                                  70 {
 78   const Run* localRun = static_cast<const Run*     71   const Run* localRun = static_cast<const Run*>(run);
 79                                                <<  72   
 80   // Pass information about primary particle   <<  73   // pass information about primary particle
 81   fParticle = localRun->fParticle;                 74   fParticle = localRun->fParticle;
 82   fEkin = localRun->fEkin;                     <<  75   fEkin     = localRun->fEkin;
 83                                                    76 
 84   // Accumulate sums                           <<  77   // accumulate sums
 85   fSP += localRun->fSP;                        <<  78   fSP   += localRun->fSP;
 86   fSP2 += localRun->fSP2;                      <<  79   fSP2  += localRun->fSP2;
 87                                                    80 
 88   G4Run::Merge(run);                           <<  81   G4Run::Merge(run); 
 89 }                                              <<  82 } 
 90                                                    83 
 91 //....oooOO0OOooo........oooOO0OOooo........oo     84 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 92                                                    85 
 93 void Run::EndOfRun()                           <<  86 void Run::EndOfRun() 
 94 {                                                  87 {
 95   std::ios::fmtflags mode = G4cout.flags();        88   std::ios::fmtflags mode = G4cout.flags();
 96   G4cout.setf(std::ios::fixed, std::ios::float <<  89   G4cout.setf(std::ios::fixed,std::ios::floatfield);
 97   G4int prec = G4cout.precision(2);                90   G4int prec = G4cout.precision(2);
 98                                                <<  91   
 99   // Run conditions                            <<  92   //run conditions  
                                                   >>  93   //
100   G4Material* material = fDetector->GetAbsorMa     94   G4Material* material = fDetector->GetAbsorMaterial();
101   G4double density = material->GetDensity();   <<  95   G4double density  = material->GetDensity();       
102   G4String partName = fParticle->GetParticleNa     96   G4String partName = fParticle->GetParticleName();
103                                                <<  97   
104   G4cout << "\n ======================== run s <<  98   G4cout << "\n ======================== run summary =====================\n";  
105   G4cout << "\n The run is " << numberOfEvent  <<  99   G4cout 
106          << G4BestUnit(fEkin, "Energy") << " t << 100     << "\n The run is " << numberOfEvent << " "<< partName << " of "
107          << G4BestUnit(fDetector->GetAbsorRadi << 101     << G4BestUnit(fEkin,"Energy") << " through a sphere of radius "
108          << " (density: " << G4BestUnit(densit << 102     << G4BestUnit(fDetector->GetAbsorRadius(),"Length") << "of "
                                                   >> 103     << material->GetName() << " (density: " 
                                                   >> 104     << G4BestUnit(density,"Volumic Mass") << ")" << G4endl;    
109                                                   105 
110   if (numberOfEvent == 0) {                       106   if (numberOfEvent == 0) {
111     G4cout.setf(mode, std::ios::floatfield);   << 107     G4cout.setf(mode,std::ios::floatfield);
112     G4cout.precision(prec);                    << 108     G4cout.precision(prec);  
113     return;                                       109     return;
114   }                                               110   }
115                                                << 111                     
116   // Compute stopping power                    << 112   //compute stopping power
117   fSP /= numberOfEvent;                        << 113   //
118   fSP2 /= numberOfEvent;                       << 114   fSP /= numberOfEvent; fSP2 /= numberOfEvent;
119   G4double rms = fSP2 - fSP * fSP;             << 115   G4double rms = fSP2 - fSP*fSP;      
120                                                << 116         
121   if (rms > 0.)                                << 117   if (rms>0.) rms = std::sqrt(rms); else rms = 0.;
122     rms = std::sqrt(rms);                      << 118 
123   else                                         << 119   G4cout 
124     rms = 0.;                                  << 120   << "\n total Stopping Power (keV/um)   = "<< fSP/(keV/um)
125                                                << 121   << " +- "                                << rms/(keV/um)    
126   G4cout << "\n total Stopping Power (keV/um)  << 122   << G4endl;
127          << rms / (keV / um) << G4endl;        << 123     
128                                                << 124   //output file
129   // Output file                               << 125   //
130   FILE* myFile;                                   126   FILE* myFile;
131   myFile = fopen("spower.txt", "a");           << 127   myFile=fopen("spower.txt","a");
132   fprintf(myFile, "%e %e %e \n", fEkin / eV, f << 128   fprintf(myFile,"%e %e %e \n",
                                                   >> 129      fEkin/eV,
                                                   >> 130      fSP/(keV/um),
                                                   >> 131      rms/(keV/um));
133   fclose(myFile);                                 132   fclose(myFile);
134                                                   133 
135   // Reset default formats                     << 134   //reset default formats
136   G4cout.setf(mode, std::ios::floatfield);     << 135   //
                                                   >> 136   G4cout.setf(mode,std::ios::floatfield);
137   G4cout.precision(prec);                         137   G4cout.precision(prec);
                                                   >> 138 
138 }                                                 139 }
139                                                   140