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Geant4/examples/extended/medical/dna/pdb4dna/src/RunAction.cc

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Diff markup

Differences between /examples/extended/medical/dna/pdb4dna/src/RunAction.cc (Version 11.3.0) and /examples/extended/medical/dna/pdb4dna/src/RunAction.cc (Version 10.4.p2)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 // This example is provided by the Geant4-DNA      26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained us     27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collabo     28 // shall cite the following Geant4-DNA collaboration publication:
 29 // Med. Phys. 37 (2010) 4692-4708                  29 // Med. Phys. 37 (2010) 4692-4708
 30 // Delage et al. PDB4DNA: implementation of DN     30 // Delage et al. PDB4DNA: implementation of DNA geometry from the Protein Data
 31 //                  Bank (PDB) description for     31 //                  Bank (PDB) description for Geant4-DNA Monte-Carlo
 32 //                  simulations (submitted to      32 //                  simulations (submitted to Comput. Phys. Commun.)
 33 // The Geant4-DNA web site is available at htt     33 // The Geant4-DNA web site is available at http://geant4-dna.org
 34 //                                                 34 //
                                                   >>  35 // $Id$
 35 //                                                 36 //
 36 /// \file RunAction.cc                             37 /// \file RunAction.cc
 37 /// \brief Implementation of the RunAction cla     38 /// \brief Implementation of the RunAction class
 38                                                    39 
 39 #include "RunAction.hh"                            40 #include "RunAction.hh"
 40                                                << 
 41 #include "RunInitObserver.hh"                      41 #include "RunInitObserver.hh"
 42                                                    42 
 43 #include "G4AnalysisManager.hh"                <<  43 #include "Analysis.hh"
 44 #include "G4Run.hh"                                44 #include "G4Run.hh"
 45 #include "G4UnitsTable.hh"                         45 #include "G4UnitsTable.hh"
 46                                                    46 
 47 //....oooOO0OOooo........oooOO0OOooo........oo     47 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 48                                                    48 
 49 RunAction::RunAction() : G4UserRunAction()         49 RunAction::RunAction() : G4UserRunAction()
 50 {                                                  50 {
 51   G4AnalysisManager* analysisManager = G4Analy     51   G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
 52   analysisManager->SetDefaultFileType("root"); << 
 53   analysisManager->SetFirstHistoId(1);             52   analysisManager->SetFirstHistoId(1);
 54                                                    53 
 55   // Creating histograms                           54   // Creating histograms
 56   //                                               55   //
 57   analysisManager->CreateH1("1", "Energy depos <<  56   analysisManager->CreateH1("1",
 58   analysisManager->CreateH1("2", "Number of SS <<  57                             "Energy deposit in the target (eV)",
 59   analysisManager->CreateH1("3", "Number of DS <<  58                             1000,0.,1000.);
                                                   >>  59   analysisManager->CreateH1("2",
                                                   >>  60                             "Number of SSB",
                                                   >>  61                             10,0.,10.);
                                                   >>  62   analysisManager->CreateH1("3",
                                                   >>  63                             "Number of DSB",
                                                   >>  64                             10,0.,10.);
 60                                                    65 
 61   // Open an output file                           66   // Open an output file
 62   //                                               67   //
 63   G4String fileName = "pdb4dna_output";            68   G4String fileName = "pdb4dna_output";
 64   analysisManager->OpenFile(fileName);             69   analysisManager->OpenFile(fileName);
 65   G4String extension = analysisManager->GetFil     70   G4String extension = analysisManager->GetFileType();
 66   fileName = fileName + "." + extension;           71   fileName = fileName + "." + extension;
 67                                                    72 
 68   G4cout << "\n----> Histogram file is opened      73   G4cout << "\n----> Histogram file is opened in " << fileName << G4endl;
 69 }                                                  74 }
 70                                                    75 
 71 //....oooOO0OOooo........oooOO0OOooo........oo     76 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 72                                                    77 
 73 RunAction::~RunAction()                            78 RunAction::~RunAction()
 74 {                                                  79 {
 75   G4AnalysisManager* analysisManager = G4Analy     80   G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
 76   analysisManager->CloseFile();                    81   analysisManager->CloseFile();
                                                   >>  82 
                                                   >>  83   delete G4AnalysisManager::Instance();
 77 }                                                  84 }
 78                                                    85 
 79 //....oooOO0OOooo........oooOO0OOooo........oo     86 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 80                                                    87 
 81 void RunAction::BeginOfRunAction(const G4Run*)     88 void RunAction::BeginOfRunAction(const G4Run*)
 82 {                                                  89 {
 83   RunInitManager::Instance()->Initialize();        90   RunInitManager::Instance()->Initialize();
 84 }                                                  91 }
 85                                                    92 
 86 //....oooOO0OOooo........oooOO0OOooo........oo     93 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 87                                                    94 
 88 void RunAction::EndOfRunAction(const G4Run*)       95 void RunAction::EndOfRunAction(const G4Run*)
 89 {                                                  96 {
 90   G4AnalysisManager* analysisManager = G4Analy     97   G4AnalysisManager* analysisManager = G4AnalysisManager::Instance();
 91   // save histograms                           <<  98   // save histograms 
 92   //                                               99   //
 93   analysisManager->Write();                       100   analysisManager->Write();
 94 }                                                 101 }
                                                   >> 102 
 95                                                   103