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Geant4/examples/extended/medical/dna/pdb4dna/src/DetectorMessenger.cc

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Differences between /examples/extended/medical/dna/pdb4dna/src/DetectorMessenger.cc (Version 11.3.0) and /examples/extended/medical/dna/pdb4dna/src/DetectorMessenger.cc (Version 10.6)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 // This example is provided by the Geant4-DNA      26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained us     27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collabo     28 // shall cite the following Geant4-DNA collaboration publication:
 29 // Med. Phys. 37 (2010) 4692-4708                  29 // Med. Phys. 37 (2010) 4692-4708
 30 // Delage et al. PDB4DNA: implementation of DN     30 // Delage et al. PDB4DNA: implementation of DNA geometry from the Protein Data
 31 //                  Bank (PDB) description for     31 //                  Bank (PDB) description for Geant4-DNA Monte-Carlo
 32 //                  simulations (submitted to      32 //                  simulations (submitted to Comput. Phys. Commun.)
 33 // The Geant4-DNA web site is available at htt     33 // The Geant4-DNA web site is available at http://geant4-dna.org
 34 //                                                 34 //
 35 //                                             <<  35 // 
 36 /// \file DetectorMessenger.cc                     36 /// \file DetectorMessenger.cc
 37 /// \brief Implementation of the DetectorMesse     37 /// \brief Implementation of the DetectorMessenger class
 38                                                    38 
 39 #include "DetectorMessenger.hh"                    39 #include "DetectorMessenger.hh"
 40                                                << 
 41 #include "DetectorConstruction.hh"                 40 #include "DetectorConstruction.hh"
 42                                                    41 
                                                   >>  42 #include "G4UIdirectory.hh"
 43 #include "G4UIcmdWithAString.hh"                   43 #include "G4UIcmdWithAString.hh"
 44 #include "G4UIcmdWithoutParameter.hh"              44 #include "G4UIcmdWithoutParameter.hh"
 45 #include "G4UIdirectory.hh"                    << 
 46                                                    45 
 47 //....oooOO0OOooo........oooOO0OOooo........oo     46 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 48                                                    47 
 49 DetectorMessenger::DetectorMessenger(DetectorC     48 DetectorMessenger::DetectorMessenger(DetectorConstruction* Det)
 50   : G4UImessenger(), fpDetectorConstruction(De <<  49 : G4UImessenger(),
 51 {                                              <<  50   fpDetectorConstruction(Det)
                                                   >>  51 { 
 52   fpDirectory = new G4UIdirectory("/PDB4DNA/")     52   fpDirectory = new G4UIdirectory("/PDB4DNA/");
 53   fpDirectory->SetGuidance("UI commands of thi     53   fpDirectory->SetGuidance("UI commands of this example");
 54                                                    54 
 55   fpDetDirectory = new G4UIdirectory("/PDB4DNA     55   fpDetDirectory = new G4UIdirectory("/PDB4DNA/det/");
 56   fpDetDirectory->SetGuidance("Detector constr     56   fpDetDirectory->SetGuidance("Detector construction control");
 57                                                    57 
 58   fpLoadPdbCmd = new G4UIcmdWithAString("/PDB4 <<  58   fpLoadPdbCmd = new G4UIcmdWithAString("/PDB4DNA/det/loadPDB",this);
 59   fpLoadPdbCmd->SetGuidance("Load PDB file");      59   fpLoadPdbCmd->SetGuidance("Load PDB file");
 60   fpLoadPdbCmd->SetParameterName("filename", f <<  60   fpLoadPdbCmd->SetParameterName("filename",false);
 61   fpLoadPdbCmd->AvailableForStates(G4State_Pre     61   fpLoadPdbCmd->AvailableForStates(G4State_PreInit, G4State_Idle);
 62                                                    62 
 63   fpDrawAtoms = new G4UIcmdWithoutParameter("/ <<  63   fpDrawAtoms = new G4UIcmdWithoutParameter("/PDB4DNA/det/drawAtoms",this);
 64   fpDrawAtoms->SetGuidance("Draw atoms");          64   fpDrawAtoms->SetGuidance("Draw atoms");
 65   fpDrawAtoms->AvailableForStates(G4State_PreI     65   fpDrawAtoms->AvailableForStates(G4State_PreInit, G4State_Idle);
 66                                                    66 
 67   fpDrawNucleotides = new G4UIcmdWithoutParame <<  67   fpDrawNucleotides = new G4UIcmdWithoutParameter(
                                                   >>  68       "/PDB4DNA/det/drawNucleotides",
                                                   >>  69       this);
 68   fpDrawNucleotides->SetGuidance("Draw nucleot     70   fpDrawNucleotides->SetGuidance("Draw nucleotides with bounding sphere");
 69   fpDrawNucleotides->AvailableForStates(G4Stat     71   fpDrawNucleotides->AvailableForStates(G4State_PreInit, G4State_Idle);
 70                                                    72 
 71   fpDrawResidues = new G4UIcmdWithoutParameter <<  73   fpDrawResidues = new G4UIcmdWithoutParameter(
 72   fpDrawResidues->SetGuidance(                 <<  74       "/PDB4DNA/det/drawResidues",
 73     "Draw residues inside nucleotides with sph <<  75       this);
 74     "linked by cylinders");                    <<  76   fpDrawResidues->SetGuidance("Draw residues inside nucleotides with sphere "
                                                   >>  77       "linked by cylinders");
 75   fpDrawResidues->AvailableForStates(G4State_P     78   fpDrawResidues->AvailableForStates(G4State_PreInit, G4State_Idle);
 76                                                    79 
 77   fpBuildBoundingV = new G4UIcmdWithoutParamet <<  80   fpBuildBoundingV = new G4UIcmdWithoutParameter(
                                                   >>  81       "/PDB4DNA/det/buildBoundingV",
                                                   >>  82       this);
 78   fpBuildBoundingV->SetGuidance("Build molecul     83   fpBuildBoundingV->SetGuidance("Build molecule bounding volume");
 79   fpBuildBoundingV->AvailableForStates(G4State     84   fpBuildBoundingV->AvailableForStates(G4State_PreInit, G4State_Idle);
 80                                                    85 
 81   fpDrawAtomsWithBounding = new G4UIcmdWithout <<  86   fpDrawAtomsWithBounding = new G4UIcmdWithoutParameter(
                                                   >>  87       "/PDB4DNA/det/drawAtomsWithBounding",
                                                   >>  88       this);
 82   fpDrawAtomsWithBounding->SetGuidance("Draw a     89   fpDrawAtomsWithBounding->SetGuidance("Draw atoms with bounding volume");
 83   fpDrawAtomsWithBounding->AvailableForStates(     90   fpDrawAtomsWithBounding->AvailableForStates(G4State_PreInit, G4State_Idle);
 84                                                    91 
 85   fpDrawNucleotidesWithBounding =              <<  92   fpDrawNucleotidesWithBounding = new G4UIcmdWithoutParameter(
 86     new G4UIcmdWithoutParameter("/PDB4DNA/det/ <<  93       "/PDB4DNA/det/drawNucleotidesWithBounding",
                                                   >>  94       this);
 87   fpDrawNucleotidesWithBounding->SetGuidance(      95   fpDrawNucleotidesWithBounding->SetGuidance(
 88     "Draw nucleotides with bounding sphere and <<  96       "Draw nucleotides with bounding sphere and bounding volume");
 89   fpDrawNucleotidesWithBounding->AvailableForS <<  97   fpDrawNucleotidesWithBounding->AvailableForStates(G4State_PreInit,
 90                                                <<  98                                                     G4State_Idle);
 91   fpDrawResiduesWithBounding =                 <<  99 
 92     new G4UIcmdWithoutParameter("/PDB4DNA/det/ << 100   fpDrawResiduesWithBounding = new G4UIcmdWithoutParameter(
 93   fpDrawResiduesWithBounding->SetGuidance(     << 101       "/PDB4DNA/det/drawResiduesWithBounding",
 94     "Draw residues inside nucleotides"         << 102       this);
 95     " with sphere linked by cylinders and with << 103   fpDrawResiduesWithBounding->SetGuidance("Draw residues inside nucleotides"
 96   fpDrawResiduesWithBounding->AvailableForStat << 104       " with sphere linked by cylinders and with bounding volume");
                                                   >> 105   fpDrawResiduesWithBounding->AvailableForStates(
                                                   >> 106       G4State_PreInit, G4State_Idle);
 97 }                                                 107 }
 98                                                   108 
 99 //....oooOO0OOooo........oooOO0OOooo........oo    109 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
100                                                   110 
101 DetectorMessenger::~DetectorMessenger()           111 DetectorMessenger::~DetectorMessenger()
102 {                                                 112 {
103   delete fpLoadPdbCmd;                            113   delete fpLoadPdbCmd;
104   delete fpDrawAtoms;                             114   delete fpDrawAtoms;
105   delete fpDrawNucleotides;                       115   delete fpDrawNucleotides;
106   delete fpDrawResidues;                          116   delete fpDrawResidues;
107   delete fpBuildBoundingV;                        117   delete fpBuildBoundingV;
108   delete fpDrawAtomsWithBounding;                 118   delete fpDrawAtomsWithBounding;
109   delete fpDrawNucleotidesWithBounding;           119   delete fpDrawNucleotidesWithBounding;
110   delete fpDrawResiduesWithBounding;              120   delete fpDrawResiduesWithBounding;
111                                                   121 
112   delete fpDetDirectory;                          122   delete fpDetDirectory;
113   delete fpDirectory;                             123   delete fpDirectory;
114 }                                                 124 }
115                                                   125 
116 //....oooOO0OOooo........oooOO0OOooo........oo    126 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
117                                                   127 
118 void DetectorMessenger::SetNewValue(G4UIcomman << 128 void DetectorMessenger::SetNewValue(G4UIcommand* command,G4String newValue)
119 {                                              << 129 { 
120   if (command == fpLoadPdbCmd) {               << 130   if( command == fpLoadPdbCmd )
                                                   >> 131   {
121     fpDetectorConstruction->LoadPDBfile(newVal    132     fpDetectorConstruction->LoadPDBfile(newValue);
122   }                                               133   }
123   if (command == fpDrawAtoms) {                << 134   if( command == fpDrawAtoms )
                                                   >> 135   {
124     fpDetectorConstruction->DrawAtoms_();         136     fpDetectorConstruction->DrawAtoms_();
125   }                                               137   }
126   if (command == fpDrawNucleotides) {          << 138   if( command == fpDrawNucleotides )
                                                   >> 139   {
127     fpDetectorConstruction->DrawNucleotides_()    140     fpDetectorConstruction->DrawNucleotides_();
128   }                                               141   }
129   if (command == fpDrawResidues) {             << 142   if( command == fpDrawResidues )
                                                   >> 143   {
130     fpDetectorConstruction->DrawResidues_();      144     fpDetectorConstruction->DrawResidues_();
131   }                                               145   }
132   if (command == fpBuildBoundingV) {           << 146   if( command == fpBuildBoundingV )
                                                   >> 147   {
133     fpDetectorConstruction->BuildBoundingVolum    148     fpDetectorConstruction->BuildBoundingVolume();
134   }                                               149   }
135   if (command == fpDrawAtomsWithBounding) {    << 150   if( command == fpDrawAtomsWithBounding )
                                                   >> 151   {
136     fpDetectorConstruction->DrawAtomsWithBound    152     fpDetectorConstruction->DrawAtomsWithBounding_();
137   }                                               153   }
138   if (command == fpDrawNucleotidesWithBounding << 154   if( command == fpDrawNucleotidesWithBounding )
                                                   >> 155   {
139     fpDetectorConstruction->DrawNucleotidesWit    156     fpDetectorConstruction->DrawNucleotidesWithBounding_();
140   }                                               157   }
141   if (command == fpDrawResiduesWithBounding) { << 158   if( command == fpDrawResiduesWithBounding )
                                                   >> 159   {
142     fpDetectorConstruction->DrawResiduesWithBo    160     fpDetectorConstruction->DrawResiduesWithBounding_();
143   }                                               161   }
144 }                                                 162 }
145                                                   163