| Geant4 Cross Reference |
1 // 1
2 // *******************************************
3 // * License and Disclaimer
4 // *
5 // * The Geant4 software is copyright of th
6 // * the Geant4 Collaboration. It is provided
7 // * conditions of the Geant4 Software License
8 // * LICENSE and available at http://cern.ch/
9 // * include a list of copyright holders.
10 // *
11 // * Neither the authors of this software syst
12 // * institutes,nor the agencies providing fin
13 // * work make any representation or warran
14 // * regarding this software system or assum
15 // * use. Please see the license in the file
16 // * for the full disclaimer and the limitatio
17 // *
18 // * This code implementation is the result
19 // * technical work of the GEANT4 collaboratio
20 // * By using, copying, modifying or distri
21 // * any work based on the software) you ag
22 // * use in resulting scientific publicati
23 // * acceptance of all terms of the Geant4 Sof
24 // *******************************************
25 //
26 // This example is provided by the Geant4-DNA
27 // Any report or published results obtained us
28 // shall cite the following Geant4-DNA collabo
29 // Med. Phys. 37 (2010) 4692-4708
30 // and papers
31 // M. Batmunkh et al. J Radiat Res Appl Sci 8
32 // O. Belov et al. Physica Medica 32 (2016) 15
33 // The Geant4-DNA web site is available at htt
34 //
35 // -------------------------------------------
36 // November 2016
37 // -------------------------------------------
38 //
39 /// \file neuron.cc
40 /// \brief Implementation of the neuron exampl
41 //
42 //....oooOO0OOooo........oooOO0OOooo........oo
43 #include "ActionInitialization.hh"
44 #include "CommandLineParser.hh"
45 #include "DetectorConstruction.hh"
46 #include "PhysicsList.hh"
47
48 #include "G4DNAChemistryManager.hh"
49 #include "G4RunManagerFactory.hh"
50 #include "G4Timer.hh"
51 #include "G4Types.hh"
52 #include "G4UIExecutive.hh"
53 #include "G4UImanager.hh"
54 #include "G4VisExecutive.hh"
55
56 //....oooOO0OOooo........oooOO0OOooo........oo
57
58 using namespace std;
59 using namespace G4DNAPARSER;
60
61 CommandLineParser* parser(0);
62
63 void Parse(int& argc, char** argv);
64
65 int main(int argc, char** argv)
66 {
67 // run time in Geant4
68 G4Timer* timer = new G4Timer();
69 timer->Start();
70
71 //////////
72 // Parse options given in commandLine
73 //
74 Parse(argc, argv);
75
76 //////////
77 // Construct the run manager according to wh
78 //
79 Command* commandLine(0);
80
81 auto* runManager = G4RunManagerFactory::Crea
82
83 if ((commandLine = parser->GetCommandIfActiv
84 G4int nThreads = 2;
85
86 if (commandLine->GetOption() == "NMAX") {
87 nThreads = G4Threading::G4GetNumberOfCor
88 }
89 else {
90 nThreads = G4UIcommand::ConvertToInt(com
91 }
92 runManager->SetNumberOfThreads(nThreads);
93
94 G4cout << "===== neuron is started with "
95 << " threads of MT MODE =====" << G
96 }
97
98 // Set mandatory user initialization classes
99 DetectorConstruction* detector = new Detecto
100 runManager->SetUserInitialization(detector);
101 runManager->SetUserInitialization(new Physic
102
103 // User action initialization
104 runManager->SetUserInitialization(new Action
105
106 // Initialize G4 kernel
107 runManager->Initialize();
108
109 // Initialize visualization
110 G4VisManager* visManager = new G4VisExecutiv
111 visManager->Initialize();
112
113 // Get the pointer to the User Interface man
114 G4UImanager* UImanager = G4UImanager::GetUIp
115 G4UIExecutive* ui(0);
116
117 // interactive mode : define UI session
118 if ((commandLine = parser->GetCommandIfActiv
119 ui = new G4UIExecutive(argc, argv, command
120
121 if (ui->IsGUI()) UImanager->ApplyCommand("
122
123 if (parser->GetCommandIfActive("-novis") =
124 // visualization is used by default
125 {
126 if ((commandLine = parser->GetCommandIfA
127 // select a visualization driver if need
128 {
129 UImanager->ApplyCommand(G4String("/vis
130 }
131 else
132 // by default OGL is used
133 {
134 UImanager->ApplyCommand("/vis/open OGL
135 }
136 UImanager->ApplyCommand("/control/execut
137 }
138 }
139 else
140 // to be use visualization file (= store the
141 // an external file:
142 // ASCIITree ; DAWNFILE ; HepRepFile ; VRML
143 {
144 if ((commandLine = parser->GetCommandIfAct
145 UImanager->ApplyCommand(G4String("/vis/o
146 UImanager->ApplyCommand("/control/execut
147 }
148 }
149
150 if ((commandLine = parser->GetCommandIfActiv
151 G4String command = "/control/execute ";
152 UImanager->ApplyCommand(command + commandL
153 }
154 else {
155 UImanager->ApplyCommand("/control/execute
156 }
157
158 if ((commandLine = parser->GetCommandIfActiv
159 ui->SessionStart();
160 delete ui;
161 }
162
163 // calculation time
164 timer->Stop();
165 G4cout << " Calculation time
166 << G4endl;
167
168 delete visManager;
169 delete runManager;
170
171 return 0;
172 }
173
174 //....oooOO0OOooo........oooOO0OOooo........oo
175
176 void GetNameAndPathOfExecutable(char** argv, G
177 {
178 // Get the last position of '/'
179 std::string aux(argv[0]);
180
181 // get '/' or '\\' depending on unix/mac or
182 #if defined(_WIN32) || defined(WIN32)
183 int pos = aux.rfind('\\');
184 #else
185 int pos = aux.rfind('/');
186 #endif
187
188 // Get the path and the name
189 path = aux.substr(0, pos + 1);
190 executable = aux.substr(pos + 1);
191 }
192
193 //....oooOO0OOooo........oooOO0OOooo........oo
194
195 void Parse(int& argc, char** argv)
196 {
197 //////////
198 // Parse options given in commandLine
199 //
200 parser = CommandLineParser::GetParser();
201
202 parser->AddCommand("-gui", Command::OptionNo
203 "Select geant4 UI or just
204
205 parser->AddCommand("-mac", Command::WithOpti
206
207 // You cann your own command, as for instanc
208 // parser->AddCommand("-seed",
209 // Command::WithOption,
210 // "Give a seed value in
211 // it is then up to you to manage this optio
212
213 parser->AddCommand("-mt", Command::WithOptio
214 " NOT RECOMMANDED WITH CH
215
216 parser->AddCommand("-sXY", Command::OptionNo
217 "Initial beam position un
218 parser->AddCommand("-dXY", Command::OptionNo
219 "Initial beam position un
220
221 parser->AddCommand("-dnaliv", Command::Optio
222 parser->AddCommand("-dnachemON", Command::Op
223 "Activate Livermore + DNA
224 parser->AddCommand("-dnahad", Command::Optio
225 "Activate Hadronic + Live
226
227 parser->AddCommand("-swc", Command::WithOpti
228
229 parser->AddCommand("-network",
230 Command::WithOption, //
231 "Give a DAT file to simul
232
233 parser->AddCommand("-vis", Command::WithOpti
234 "OGL 600x600-0+0");
235
236 parser->AddCommand("-novis", Command::Withou
237
238 G4String exec;
239 G4String path;
240 GetNameAndPathOfExecutable(argv, exec, path)
241
242 parser->AddCommand("-out", Command::OptionNo
243
244 //////////
245 // If -h or --help is given in option : prin
246 //
247 if (parser->Parse(argc, argv) != 0) // help
248 {
249 // if you are using ROOT, create a TApplic
250 // to print the help from ROOT as well
251 CommandLineParser::DeleteInstance();
252 std::exit(0);
253 }
254 ///////////
255 // Kill application if wrong argument in com
256 //
257 if (parser->CheckIfNotHandledOptionsExists(a
258 // if you are using ROOT, you should initi
259 // before this condition
260 abort();
261 }
262 }
263