Geant4 Cross Reference

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Geant4/examples/extended/medical/dna/mfp/src/Run.cc

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Diff markup

Differences between /examples/extended/medical/dna/mfp/src/Run.cc (Version 11.3.0) and /examples/extended/medical/dna/mfp/src/Run.cc (Version 3.0)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 // This example is provided by the Geant4-DNA     
 27 // Any report or published results obtained us    
 28 // shall cite the following Geant4-DNA collabo    
 29 // Med. Phys. 45 (2018) e722-e739                 
 30 // Phys. Med. 31 (2015) 861-874                   
 31 // Med. Phys. 37 (2010) 4692-4708                 
 32 // Int. J. Model. Simul. Sci. Comput. 1 (2010)    
 33 //                                                
 34 // The Geant4-DNA web site is available at htt    
 35 //                                                
 36 /// \file Run.cc                                  
 37 /// \brief Implementation of the Run class        
 38                                                   
 39 #include "Run.hh"                                 
 40                                                   
 41 #include "PrimaryGeneratorAction.hh"              
 42                                                   
 43 #include "G4Material.hh"                          
 44 #include "G4SystemOfUnits.hh"                     
 45 #include "G4UnitsTable.hh"                        
 46                                                   
 47 //....oooOO0OOooo........oooOO0OOooo........oo    
 48                                                   
 49 Run::Run(const DetectorConstruction* detector)    
 50   : G4Run(),                                      
 51     fDetector(detector),                          
 52     fParticle(0),                                 
 53     fEkin(0.),                                    
 54     fTotalCount(0),                               
 55     fSumTrack(0.),                                
 56     fSumTrack2(0.),                               
 57     fEnTransfer(0.)                               
 58 {}                                                
 59                                                   
 60 //....oooOO0OOooo........oooOO0OOooo........oo    
 61                                                   
 62 Run::~Run() {}                                    
 63                                                   
 64 //....oooOO0OOooo........oooOO0OOooo........oo    
 65                                                   
 66 void Run::SetPrimary(G4ParticleDefinition* par    
 67 {                                                 
 68   fParticle = particle;                           
 69   fEkin = energy;                                 
 70 }                                                 
 71                                                   
 72 //....oooOO0OOooo........oooOO0OOooo........oo    
 73                                                   
 74 void Run::CountProcesses(G4String procName)       
 75 {                                                 
 76   std::map<G4String, G4int>::iterator it = fPr    
 77   if (it == fProcCounter.end()) {                 
 78     fProcCounter[procName] = 1;                   
 79   }                                               
 80   else {                                          
 81     fProcCounter[procName]++;                     
 82   }                                               
 83 }                                                 
 84                                                   
 85 //....oooOO0OOooo........oooOO0OOooo........oo    
 86                                                   
 87 void Run::SumTrack(G4double track)                
 88 {                                                 
 89   fTotalCount++;                                  
 90   fSumTrack += track;                             
 91   fSumTrack2 += track * track;                    
 92 }                                                 
 93                                                   
 94 //....oooOO0OOooo........oooOO0OOooo........oo    
 95                                                   
 96 void Run::SumeTransf(G4double energy)             
 97 {                                                 
 98   fEnTransfer += energy;                          
 99 }                                                 
100                                                   
101 //....oooOO0OOooo........oooOO0OOooo........oo    
102                                                   
103 void Run::Merge(const G4Run* run)                 
104 {                                                 
105   const Run* localRun = static_cast<const Run*    
106                                                   
107   // Pass information about primary particle      
108   fParticle = localRun->fParticle;                
109   fEkin = localRun->fEkin;                        
110                                                   
111   // map: processes count                         
112   std::map<G4String, G4int>::const_iterator it    
113   for (it = localRun->fProcCounter.begin(); it    
114     G4String procName = it->first;                
115     G4int localCount = it->second;                
116                                                   
117     if (fProcCounter.find(procName) == fProcCo    
118       fProcCounter[procName] = localCount;        
119     }                                             
120     else {                                        
121       fProcCounter[procName] += localCount;       
122     }                                             
123   }                                               
124                                                   
125   fTotalCount += localRun->fTotalCount;           
126   fSumTrack += localRun->fSumTrack;               
127   fSumTrack2 += localRun->fSumTrack2;             
128   fEnTransfer += localRun->fEnTransfer;           
129                                                   
130   G4Run::Merge(run);                              
131 }                                                 
132                                                   
133 //....oooOO0OOooo........oooOO0OOooo........oo    
134                                                   
135 void Run::EndOfRun()                              
136 {                                                 
137   std::ios::fmtflags mode = G4cout.flags();       
138   G4cout.setf(std::ios::fixed, std::ios::float    
139   G4int prec = G4cout.precision(2);               
140                                                   
141   // Run conditions                               
142   G4Material* material = fDetector->GetAbsorMa    
143   G4double density = material->GetDensity();      
144   G4String partName = fParticle->GetParticleNa    
145                                                   
146   G4cout << "\n ======================== run s    
147   G4cout << "\n The run is " << numberOfEvent     
148          << G4BestUnit(fEkin, "Energy") << " t    
149          << G4BestUnit(fDetector->GetAbsorRadi    
150          << " (density: " << G4BestUnit(densit    
151                                                   
152   if (numberOfEvent == 0) {                       
153     G4cout.setf(mode, std::ios::floatfield);      
154     G4cout.precision(prec);                       
155     return;                                       
156   }                                               
157                                                   
158   // Frequency of processes                       
159   G4int survive = 0;                              
160   G4cout << "\n Process calls frequency --->";    
161   std::map<G4String, G4int>::iterator it;         
162   for (it = fProcCounter.begin(); it != fProcC    
163     G4String procName = it->first;                
164     G4int count = it->second;                     
165     G4cout << "\t" << procName << " = " << cou    
166     if (procName == "Transportation") survive     
167   }                                               
168                                                   
169   if (survive > 0) {                              
170     G4cout << "\n\n Nb of incident particles s    
171            << "a radius of " << G4BestUnit(fDe    
172            << material->GetName() << " : " <<     
173   }                                               
174                                                   
175   if (fTotalCount == 0) fTotalCount = 1;  // f    
176                                                   
177   // Compute mean free path and related quanti    
178   G4double MeanFreePath = fSumTrack / fTotalCo    
179   G4double MeanTrack2 = fSumTrack2 / fTotalCou    
180   G4double rmsBis = std::sqrt(std::fabs(MeanTr    
181   G4double CrossSection = 1. / MeanFreePath;      
182   G4double massicMFP = MeanFreePath * density;    
183   G4double massicCS = 1. / massicMFP;             
184                                                   
185   G4cout << "\n\n MeanFreePath:\t" << G4BestUn    
186          << G4BestUnit(rmsBis, "Length")          
187          << "\t\t\tmassic: " << G4BestUnit(mas    
188          << CrossSection * cm << " cm^-1 "        
189          << "\t\t\tmassic: " << G4BestUnit(mas    
190                                                   
191   // Compute energy transfer coefficient          
192   G4double MeanTransfer = fEnTransfer / fTotal    
193   G4double massTransfCoef = massicCS * MeanTra    
194                                                   
195   G4cout << "\n mean energy of charged seconda    
196          << "\tmass_energy_transfer coef: " <<    
197                                                   
198   // Output file                                  
199   FILE* myFile;                                   
200   myFile = fopen("mfp.txt", "a");                 
201   fprintf(myFile, "%e %e %e \n", fEkin / eV, M    
202   fclose(myFile);                                 
203                                                   
204   // Remove all contents in fProcCounter          
205   fProcCounter.clear();                           
206                                                   
207   // Reset default formats                        
208   G4cout.setf(mode, std::ios::floatfield);        
209   G4cout.precision(prec);                         
210 }                                                 
211