Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/dnaphysics/dnaphysics.cc

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

Diff markup

Differences between /examples/extended/medical/dna/dnaphysics/dnaphysics.cc (Version 11.3.0) and /examples/extended/medical/dna/dnaphysics/dnaphysics.cc (Version 10.5)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 // This example is provided by the Geant4-DNA      26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained us     27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collabo <<  28 // shall cite the following Geant4-DNA collaboration publication:
 29 // Med. Phys. 45 (2018) e722-e739              << 
 30 // Phys. Med. 31 (2015) 861-874                << 
 31 // Med. Phys. 37 (2010) 4692-4708                  29 // Med. Phys. 37 (2010) 4692-4708
 32 // Int. J. Model. Simul. Sci. Comput. 1 (2010) << 
 33 //                                             << 
 34 // The Geant4-DNA web site is available at htt     30 // The Geant4-DNA web site is available at http://geant4-dna.org
 35 //                                                 31 //
                                                   >>  32 //
 36 /// \file dnaphysics.cc                            33 /// \file dnaphysics.cc
 37 /// \brief Implementation of the dnaphysics ex     34 /// \brief Implementation of the dnaphysics example
                                                   >>  35 #include "G4Types.hh"
 38                                                    36 
 39 #include "ActionInitialization.hh"             <<  37 #ifdef G4MULTITHREADED
 40 #include "DetectorConstruction.hh"             <<  38   #include "G4MTRunManager.hh"
 41 #include "PhysicsList.hh"                      <<  39 #else
                                                   >>  40   #include "G4RunManager.hh"
                                                   >>  41 #endif
 42                                                    42 
 43 #include "G4RunManagerFactory.hh"              << 
 44 #include "G4Types.hh"                          << 
 45 #include "G4UIExecutive.hh"                    << 
 46 #include "G4UImanager.hh"                          43 #include "G4UImanager.hh"
                                                   >>  44 #include "G4UIExecutive.hh"
 47 #include "G4VisExecutive.hh"                       45 #include "G4VisExecutive.hh"
 48                                                    46 
                                                   >>  47 #include "ActionInitialization.hh"
                                                   >>  48 #include "DetectorConstruction.hh"
                                                   >>  49 #include "PhysicsList.hh"
                                                   >>  50 
 49 //....oooOO0OOooo........oooOO0OOooo........oo     51 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 50                                                    52 
 51 int main(int argc, char** argv)                <<  53 int main(int argc,char** argv)
 52 {                                                  54 {
 53   // Detect interactive mode (if no arguments)     55   // Detect interactive mode (if no arguments) and define UI session
 54   G4UIExecutive* ui = nullptr;                 <<  56   //
 55   if (argc == 1) {                             <<  57   G4UIExecutive* ui = 0;
                                                   >>  58   if ( argc == 1 ) {
 56     ui = new G4UIExecutive(argc, argv);            59     ui = new G4UIExecutive(argc, argv);
 57   }                                                60   }
 58                                                    61 
 59   // Construct the default run manager             62   // Construct the default run manager
 60   auto* runManager = G4RunManagerFactory::Crea <<  63 
 61   if (argc == 3)                               <<  64 #ifdef G4MULTITHREADED
 62     runManager->SetNumberOfThreads(atoi(argv[2 <<  65   G4MTRunManager* runManager = new G4MTRunManager;
 63   else                                         <<  66   if(argc==3) runManager->SetNumberOfThreads(atoi(argv[2]));
 64     runManager->SetNumberOfThreads(2);         <<  67   else runManager->SetNumberOfThreads(2);
                                                   >>  68 #else
                                                   >>  69   G4RunManager* runManager = new G4RunManager;
                                                   >>  70 #endif
 65                                                    71 
 66   // Set mandatory user initialization classes     72   // Set mandatory user initialization classes
 67   auto physlist = new PhysicsList();           <<  73   runManager->SetUserInitialization(new DetectorConstruction);
 68   runManager->SetUserInitialization(new Detect <<  74   runManager->SetUserInitialization(new PhysicsList);
 69   runManager->SetUserInitialization(physlist); << 
 70                                                    75 
 71   // User action initialization                    76   // User action initialization
 72   runManager->SetUserInitialization(new Action     77   runManager->SetUserInitialization(new ActionInitialization());
 73                                                    78 
 74   // Visualization                                 79   // Visualization
 75   G4VisExecutive* visManager = nullptr;        <<  80   G4VisManager* visManager = new G4VisExecutive;
                                                   >>  81   visManager->Initialize();
 76                                                    82 
 77   // Get the pointer to the User Interface man     83   // Get the pointer to the User Interface manager
 78   G4UImanager* UImanager = G4UImanager::GetUIp     84   G4UImanager* UImanager = G4UImanager::GetUIpointer();
 79   if (nullptr == ui) {                         <<  85 
 80     // Batch mode                              <<  86   // Process macro or start UI session
                                                   >>  87   //
                                                   >>  88   if (argc>1) {
                                                   >>  89     // batch mode
 81     G4String command = "/control/execute ";        90     G4String command = "/control/execute ";
 82     G4String fileName = argv[1];                   91     G4String fileName = argv[1];
 83     UImanager->ApplyCommand(command + fileName <<  92     UImanager->ApplyCommand(command+fileName);
 84   }                                                93   }
 85   else {                                           94   else {
 86     visManager = new G4VisExecutive;           <<  95     // interactive mode
 87     visManager->Initialize();                  << 
 88     UImanager->ApplyCommand("/control/execute      96     UImanager->ApplyCommand("/control/execute vis.mac");
 89     ui->SessionStart();                            97     ui->SessionStart();
 90     delete ui;                                     98     delete ui;
 91     delete visManager;                         << 
 92   }                                                99   }
                                                   >> 100 
                                                   >> 101   delete visManager;
 93   delete runManager;                              102   delete runManager;
                                                   >> 103 
 94   return 0;                                       104   return 0;
 95 }                                                 105 }
 96                                                   106