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Geant4/examples/extended/medical/dna/dnadamage2/src/Run.cc

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Diff markup

Differences between /examples/extended/medical/dna/dnadamage2/src/Run.cc (Version 11.3.0) and /examples/extended/medical/dna/dnadamage2/src/Run.cc (Version 10.4)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 // This example is provided by the Geant4-DNA     
 27 // dnadamage3 example is derived from the chem    
 28 // chem6 example authors: W. G. Shin and S. In    
 29 //                                                
 30 // Any report or published results obtained us    
 31 // shall cite the following Geant4-DNA collabo    
 32 // J. Appl. Phys. 125 (2019) 104301               
 33 // Med. Phys. 45 (2018) e722-e739                 
 34 // J. Comput. Phys. 274 (2014) 841-882            
 35 // Med. Phys. 37 (2010) 4692-4708                 
 36 // Int. J. Model. Simul. Sci. Comput. 1 (2010)    
 37 // The Geant4-DNA web site is available at htt    
 38 //                                                
 39 // Authors: J. Naoki D. Kondo (UCSF, US)          
 40 //          J. Ramos-Mendez and B. Faddegon (U    
 41 //                                                
 42 /// \file Run.cc                                  
 43 /// \brief Implementation of the Run class        
 44                                                   
 45 #include "Run.hh"                                 
 46                                                   
 47 #include "RunAction.hh"                           
 48 #include "ScoreSpecies.hh"                        
 49                                                   
 50 #include "G4Event.hh"                             
 51 #include "G4HCofThisEvent.hh"                     
 52 #include "G4RunManager.hh"                        
 53 #include "G4SDManager.hh"                         
 54 #include "G4SystemOfUnits.hh"                     
 55 #include "G4THitsMap.hh"                          
 56 #include "G4VSensitiveDetector.hh"                
 57                                                   
 58 #include <map>                                    
 59 //....oooOO0OOooo........oooOO0OOooo........oo    
 60                                                   
 61 Run::Run() : G4Run()                              
 62 {                                                 
 63   G4MultiFunctionalDetector* mfdet = dynamic_c    
 64     G4SDManager::GetSDMpointer()->FindSensitiv    
 65   G4int CollectionIDspecies = G4SDManager::Get    
 66   G4int CollectionIDLET = G4SDManager::GetSDMp    
 67   G4int CollectionSB = G4SDManager::GetSDMpoin    
 68                                                   
 69   fTotalLET = new G4THitsMap<G4double>("mfDete    
 70   fScorerRun = mfdet->GetPrimitive(CollectionI    
 71   fLETScorerRun = mfdet->GetPrimitive(Collecti    
 72   fStrandBreakRun = mfdet->GetPrimitive(Collec    
 73 }                                                 
 74                                                   
 75 //....oooOO0OOooo........oooOO0OOooo........oo    
 76                                                   
 77 void Run::RecordEvent(const G4Event* event)       
 78 {                                                 
 79   if (event->IsAborted()) return;                 
 80                                                   
 81   G4int CollectionID = G4SDManager::GetSDMpoin    
 82                                                   
 83   G4int CollectionIDLET = G4SDManager::GetSDMp    
 84                                                   
 85   // Hits collections                             
 86   //                                              
 87   G4HCofThisEvent* HCE = event->GetHCofThisEve    
 88   if (!HCE) return;                               
 89                                                   
 90   G4THitsMap<G4double>* evtMap = static_cast<G    
 91                                                   
 92   G4THitsMap<G4double>* evtLET = static_cast<G    
 93                                                   
 94   G4int nOfMap = evtLET->entries();               
 95                                                   
 96   G4int nOftotal = fTotalLET->entries();          
 97                                                   
 98   for (G4int i = 0; i < nOfMap; i++) {            
 99     G4double* LET = (*evtLET)[i];                 
100     if (!LET) continue;                           
101     fTotalLET->add(nOftotal + i, *LET);           
102   }                                               
103                                                   
104   std::map<G4int, G4double*>::iterator itr;       
105                                                   
106   for (itr = evtMap->GetMap()->begin(); itr !=    
107     G4double edep = *(itr->second);               
108     fSumEne += edep;                              
109   }                                               
110                                                   
111   G4Run::RecordEvent(event);                      
112 }                                                 
113                                                   
114 //....oooOO0OOooo........oooOO0OOooo........oo    
115                                                   
116 void Run::Merge(const G4Run* aRun)                
117 {                                                 
118   if (aRun == this) {                             
119     return;                                       
120   }                                               
121                                                   
122   const Run* localRun = static_cast<const Run*    
123   fSumEne += localRun->fSumEne;                   
124                                                   
125   G4int nOfMaster = fTotalLET->entries();         
126   G4int nOfLocal = localRun->fTotalLET->entrie    
127   for (G4int i = 0; i < nOfLocal; i++) {          
128     G4double* LET = (*localRun->fTotalLET)[i];    
129     if (!LET) continue;                           
130     fTotalLET->add(nOfMaster + i, *LET);          
131   }                                               
132                                                   
133   ScoreSpecies* masterSpeciesScorer = dynamic_    
134                                                   
135   ScoreSpecies* localSpeciesScorer = dynamic_c    
136                                                   
137   masterSpeciesScorer->AbsorbResultsFromWorker    
138                                                   
139   ScoreStrandBreaks* masterSBScorer = dynamic_    
140                                                   
141   ScoreStrandBreaks* localSBScorer = dynamic_c    
142                                                   
143   masterSBScorer->AbsorbResultsFromWorkerScore    
144                                                   
145   G4Run::Merge(aRun);                             
146 }                                                 
147                                                   
148 //....oooOO0OOooo........oooOO0OOooo........oo    
149