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Geant4/examples/extended/medical/dna/dnadamage2/src/PlasmidMolecules.cc

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Diff markup

Differences between /examples/extended/medical/dna/dnadamage2/src/PlasmidMolecules.cc (Version 11.3.0) and /examples/extended/medical/dna/dnadamage2/src/PlasmidMolecules.cc (Version 11.0.p3,)


** Warning: Cannot open xref database.

  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 //                                                
 27 // Authors: J. Naoki D. Kondo (UCSF, US)          
 28 //          J. Ramos-Mendez and B. Faddegon (U    
 29 //                                                
 30 //                                                
 31 /// \file PlasmidMolecules.cc                     
 32 /// \brief Implementation of the additional Pl    
 33                                                   
 34 #include "PlasmidMolecules.hh"                    
 35                                                   
 36 #include "G4ParticleTable.hh"                     
 37 #include "G4PhysicalConstants.hh"                 
 38 #include "G4SystemOfUnits.hh"                     
 39                                                   
 40 //....oooOO0OOooo........oooOO0OOooo........oo    
 41 // Deoxyribose                                    
 42                                                   
 43 G4DNA_Deoxyribose* G4DNA_Deoxyribose::fDeoxyri    
 44 G4DNA_Deoxyribose* G4DNA_Deoxyribose::Definiti    
 45 {                                                 
 46   if (fDeoxyriboseInstance != 0) return fDeoxy    
 47   const G4String name = "DNA_Deoxyribose";        
 48                                                   
 49   G4ParticleTable* pTable = G4ParticleTable::G    
 50   G4ParticleDefinition* anInstance = pTable->F    
 51   if (anInstance == 0) {                          
 52     const G4String formatedName = "DNA_Deoxy^{    
 53                                                   
 54     G4double mass = 31.99546 * g / Avogadro *     
 55     anInstance =                                  
 56       new G4MoleculeDefinition(name, mass, 1e-    
 57                                                   
 58     ((G4MoleculeDefinition*)anInstance)->SetLe    
 59     ((G4MoleculeDefinition*)anInstance)->SetFo    
 60   }                                               
 61   fDeoxyriboseInstance = static_cast<G4DNA_Deo    
 62   return fDeoxyriboseInstance;                    
 63 }                                                 
 64                                                   
 65 //....oooOO0OOooo........oooOO0OOooo........oo    
 66 // OH_Damamged_Deoxyribose                        
 67                                                   
 68 G4DNA_DamagedDeoxyriboseOH* G4DNA_DamagedDeoxy    
 69 G4DNA_DamagedDeoxyriboseOH* G4DNA_DamagedDeoxy    
 70 {                                                 
 71   if (fDamagedDeoxyriboseOHInstance != 0) retu    
 72   const G4String name = "DNA_DamagedDeoxyribos    
 73                                                   
 74   G4ParticleTable* pTable = G4ParticleTable::G    
 75   G4ParticleDefinition* anInstance = pTable->F    
 76   if (anInstance == 0) {                          
 77     const G4String formatedName = "DamagedDeox    
 78                                                   
 79     G4double mass = 31.99546 * g / Avogadro *     
 80     anInstance =                                  
 81       new G4MoleculeDefinition(name, mass, 1e-    
 82                                                   
 83     ((G4MoleculeDefinition*)anInstance)->SetLe    
 84     ((G4MoleculeDefinition*)anInstance)->SetFo    
 85   }                                               
 86   fDamagedDeoxyriboseOHInstance = static_cast<    
 87   return fDamagedDeoxyriboseOHInstance;           
 88 }                                                 
 89                                                   
 90 //....oooOO0OOooo........oooOO0OOooo........oo    
 91 // H_Damamged_Deoxyribose                         
 92                                                   
 93 G4DNA_DamagedDeoxyriboseH* G4DNA_DamagedDeoxyr    
 94 G4DNA_DamagedDeoxyriboseH* G4DNA_DamagedDeoxyr    
 95 {                                                 
 96   if (fDamagedDeoxyriboseHInstance != 0) retur    
 97   const G4String name = "DNA_DamagedDeoxyribos    
 98                                                   
 99   G4ParticleTable* pTable = G4ParticleTable::G    
100   G4ParticleDefinition* anInstance = pTable->F    
101   if (anInstance == 0) {                          
102     const G4String formatedName = "DamagedDeox    
103                                                   
104     G4double mass = 31.99546 * g / Avogadro *     
105     anInstance =                                  
106       new G4MoleculeDefinition(name, mass, 1e-    
107                                                   
108     ((G4MoleculeDefinition*)anInstance)->SetLe    
109     ((G4MoleculeDefinition*)anInstance)->SetFo    
110   }                                               
111   fDamagedDeoxyriboseHInstance = static_cast<G    
112   return fDamagedDeoxyriboseHInstance;            
113 }                                                 
114                                                   
115 //....oooOO0OOooo........oooOO0OOooo........oo    
116 // Eaq_Damamged_Deoxyribose                       
117                                                   
118 G4DNA_DamagedDeoxyriboseEAQ* G4DNA_DamagedDeox    
119 G4DNA_DamagedDeoxyriboseEAQ* G4DNA_DamagedDeox    
120 {                                                 
121   if (fDamagedDeoxyriboseEAQInstance != 0) ret    
122   const G4String name = "DNA_DamagedDeoxyribos    
123   // search in particle table]                    
124   G4ParticleTable* pTable = G4ParticleTable::G    
125   G4ParticleDefinition* anInstance = pTable->F    
126   if (anInstance == 0) {                          
127     const G4String formatedName = "DamagedDeox    
128                                                   
129     G4double mass = 31.99546 * g / Avogadro *     
130     anInstance =                                  
131       new G4MoleculeDefinition(name, mass, 1e-    
132                                                   
133     ((G4MoleculeDefinition*)anInstance)->SetLe    
134     ((G4MoleculeDefinition*)anInstance)->SetFo    
135   }                                               
136   fDamagedDeoxyriboseEAQInstance = static_cast    
137   return fDamagedDeoxyriboseEAQInstance;          
138 }                                                 
139                                                   
140 //....oooOO0OOooo........oooOO0OOooo........oo    
141