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Geant4/examples/extended/medical/dna/dnadamage1/src/TimeStepAction.cc

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Diff markup

Differences between /examples/extended/medical/dna/dnadamage1/src/TimeStepAction.cc (Version 11.3.0) and /examples/extended/medical/dna/dnadamage1/src/TimeStepAction.cc (Version 10.7.p1)


  1 //                                                  1 //
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 26 //                                                 26 //
 27 /// \file TimeStepAction.hh                        27 /// \file TimeStepAction.hh
 28 /// \brief Implementation of the TimeStepActio     28 /// \brief Implementation of the TimeStepAction class
 29                                                    29 
 30 #include "TimeStepAction.hh"                       30 #include "TimeStepAction.hh"
 31                                                <<  31 #include <G4Scheduler.hh>
 32 #include "G4AnalysisManager.hh"                <<  32 #include "G4UnitsTable.hh"
 33 #include "G4DNAMolecule.hh"                    <<  33 #include "G4SystemOfUnits.hh"
 34 #include "G4Event.hh"                          << 
 35 #include "G4EventManager.hh"                   << 
 36 #include "G4Molecule.hh"                           34 #include "G4Molecule.hh"
                                                   >>  35 #include "g4root.hh"
                                                   >>  36 #include "G4DNAMolecule.hh"
 37 #include "G4MoleculeTable.hh"                      37 #include "G4MoleculeTable.hh"
 38 #include "G4OH.hh"                                 38 #include "G4OH.hh"
 39 #include "G4SystemOfUnits.hh"                  << 
 40 #include "G4UnitsTable.hh"                     << 
 41                                                    39 
 42 #include <G4Scheduler.hh>                      <<  40 #include "G4Event.hh"
                                                   >>  41 #include "G4EventManager.hh"
 43                                                    42 
 44 //....oooOO0OOooo........oooOO0OOooo........oo     43 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 45                                                    44 
 46 TimeStepAction::TimeStepAction() : G4UserTimeS <<  45 TimeStepAction::TimeStepAction() 
                                                   >>  46     : G4UserTimeStepAction()
 47 {                                                  47 {
 48   AddTimeStep(1 * picosecond, 0.35 * picosecon <<  48     AddTimeStep(1*picosecond, 0.35*picosecond);
 49   AddTimeStep(10 * picosecond, 1 * picosecond) <<  49     AddTimeStep(10*picosecond, 1*picosecond);
 50   AddTimeStep(100 * picosecond, 3 * picosecond <<  50     AddTimeStep(100*picosecond, 3*picosecond);
 51   AddTimeStep(1000 * picosecond, 10 * picoseco <<  51     AddTimeStep(1000*picosecond, 10*picosecond);
 52   AddTimeStep(10000 * picosecond, 100 * picose <<  52     AddTimeStep(10000*picosecond, 100*picosecond);
 53 }                                                  53 }
 54                                                    54 
 55 //....oooOO0OOooo........oooOO0OOooo........oo     55 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 56                                                    56 
 57 TimeStepAction::~TimeStepAction() {}           <<  57 TimeStepAction::~TimeStepAction()
                                                   >>  58 {}
 58                                                    59 
 59 //....oooOO0OOooo........oooOO0OOooo........oo     60 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 60                                                    61 
 61 TimeStepAction::TimeStepAction(const TimeStepA <<  62 TimeStepAction::TimeStepAction(const TimeStepAction& other) 
                                                   >>  63     : G4UserTimeStepAction(other)
                                                   >>  64 {}
 62                                                    65 
 63 //....oooOO0OOooo........oooOO0OOooo........oo     66 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 64                                                    67 
 65 TimeStepAction& TimeStepAction::operator=(cons <<  68 TimeStepAction&
                                                   >>  69 TimeStepAction::operator=(const TimeStepAction& rhs)
 66 {                                                  70 {
 67   if (this == &rhs) return *this;              <<  71     if (this == &rhs) return *this;
 68   return *this;                                <<  72     return *this;
 69 }                                                  73 }
 70                                                    74 
 71 //....oooOO0OOooo........oooOO0OOooo........oo     75 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 72                                                    76 
 73 void TimeStepAction::UserReactionAction(const  <<  77 void TimeStepAction::UserReactionAction(const G4Track& trackA,
 74                                         const  <<  78                                         const G4Track& trackB,
                                                   >>  79                                         const std::vector<G4Track*>* 
                                                   >>  80                                         pProducts)
 75 {                                                  81 {
 76   if (pProducts                                <<  82     if(pProducts && (GetMolecule((*pProducts)[0])->
 77       && (GetMolecule((*pProducts)[0])->GetDef <<  83     GetDefinition() != G4DamagedDeoxyribose::Definition()))
 78   {                                            <<  84     {
 79     return;                                    <<  85         return;
 80   }                                            <<  86     }
 81                                                <<  87     
 82   // check for the case "no product"           <<  88     //check for the case "no product"
 83   if (!pProducts) {                            <<  89     if(!pProducts)
 84     return;                                    <<  90     {
 85   }                                            <<  91         return;
 86                                                <<  92     }
 87   auto phyEventId = G4EventManager::GetEventMa <<  93     
 88                                                <<  94     auto phyEventId = G4EventManager::GetEventManager()->
 89   const G4Track* DNAElement = nullptr;         <<  95     GetConstCurrentEvent()->GetEventID();
 90   const G4Track* radical = nullptr;            <<  96     
 91   if (GetMolecule(&trackA)->GetDefinition() == <<  97     const G4Track* DNAElement = nullptr;
 92     DNAElement = &trackA;                      <<  98     const G4Track* radical    = nullptr;
 93     radical = &trackB;                         <<  99     if(GetMolecule(&trackA)->
 94   }                                            << 100     GetDefinition() == G4Deoxyribose::Definition())
 95   else {                                       << 101     {
 96     DNAElement = &trackB;                      << 102         DNAElement = &trackA;
 97     radical = &trackA;                         << 103         radical    = &trackB;
 98   }                                            << 104     }
 99                                                << 105     else 
100   if (GetMolecule(radical)->GetDefinition() != << 106     {
101     return;                                    << 107         DNAElement = &trackB;
102   }                                            << 108         radical    = &trackA;
103                                                << 109     }
104   G4AnalysisManager* analysisManager = G4Analy << 110     
105   analysisManager->FillNtupleDColumn(2, 0, DNA << 111     if(GetMolecule(radical)->GetDefinition() != G4OH::Definition())
106   analysisManager->FillNtupleDColumn(2, 1, DNA << 112     {
107   analysisManager->FillNtupleDColumn(2, 2, DNA << 113         return;
108   analysisManager->FillNtupleSColumn(2, 3, Get << 114     }
109   analysisManager->FillNtupleIColumn(2, 4, G4i << 115     
110   analysisManager->AddNtupleRow(2);            << 116     G4AnalysisManager* analysisManager = 
                                                   >> 117     G4AnalysisManager::Instance();
                                                   >> 118     analysisManager->FillNtupleDColumn(2, 0, 
                                                   >> 119     DNAElement->GetPosition().getX()/nm);
                                                   >> 120     analysisManager->FillNtupleDColumn(2, 1, 
                                                   >> 121     DNAElement->GetPosition().getY()/nm);
                                                   >> 122     analysisManager->FillNtupleDColumn(2, 2, 
                                                   >> 123     DNAElement->GetPosition().getZ()/nm);
                                                   >> 124     analysisManager->FillNtupleSColumn(2, 3, 
                                                   >> 125     GetMolecule(radical)->GetName());
                                                   >> 126     analysisManager->FillNtupleIColumn(2, 4, 
                                                   >> 127     G4int(phyEventId));
                                                   >> 128     analysisManager->AddNtupleRow(2);
111 }                                                 129 }
                                                   >> 130 
112                                                   131