Geant4 Cross Reference |
1 // 1 // 2 // ******************************************* 2 // ******************************************************************** 3 // * License and Disclaimer 3 // * License and Disclaimer * 4 // * 4 // * * 5 // * The Geant4 software is copyright of th 5 // * The Geant4 software is copyright of the Copyright Holders of * 6 // * the Geant4 Collaboration. It is provided 6 // * the Geant4 Collaboration. It is provided under the terms and * 7 // * conditions of the Geant4 Software License 7 // * conditions of the Geant4 Software License, included in the file * 8 // * LICENSE and available at http://cern.ch/ 8 // * LICENSE and available at http://cern.ch/geant4/license . These * 9 // * include a list of copyright holders. 9 // * include a list of copyright holders. * 10 // * 10 // * * 11 // * Neither the authors of this software syst 11 // * Neither the authors of this software system, nor their employing * 12 // * institutes,nor the agencies providing fin 12 // * institutes,nor the agencies providing financial support for this * 13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, * 14 // * regarding this software system or assum 14 // * regarding this software system or assume any liability for its * 15 // * use. Please see the license in the file 15 // * use. Please see the license in the file LICENSE and URL above * 16 // * for the full disclaimer and the limitatio 16 // * for the full disclaimer and the limitation of liability. * 17 // * 17 // * * 18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and * 19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. * 20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or * 21 // * any work based on the software) you ag 21 // * any work based on the software) you agree to acknowledge its * 22 // * use in resulting scientific publicati 22 // * use in resulting scientific publications, and indicate your * 23 // * acceptance of all terms of the Geant4 Sof 23 // * acceptance of all terms of the Geant4 Software license. * 24 // ******************************************* 24 // ******************************************************************** 25 // 25 // 26 // 26 // 27 /// \file TimeStepAction.hh 27 /// \file TimeStepAction.hh 28 /// \brief Implementation of the TimeStepActio 28 /// \brief Implementation of the TimeStepAction class 29 29 30 #include "TimeStepAction.hh" 30 #include "TimeStepAction.hh" 31 << 31 #include <G4Scheduler.hh> 32 #include "G4AnalysisManager.hh" << 32 #include "G4UnitsTable.hh" 33 #include "G4DNAMolecule.hh" << 33 #include "G4SystemOfUnits.hh" 34 #include "G4Event.hh" << 35 #include "G4EventManager.hh" << 36 #include "G4Molecule.hh" 34 #include "G4Molecule.hh" >> 35 #include "g4root.hh" >> 36 #include "G4DNAMolecule.hh" 37 #include "G4MoleculeTable.hh" 37 #include "G4MoleculeTable.hh" 38 #include "G4OH.hh" 38 #include "G4OH.hh" 39 #include "G4SystemOfUnits.hh" << 40 #include "G4UnitsTable.hh" << 41 39 42 #include <G4Scheduler.hh> << 40 #include "G4Event.hh" >> 41 #include "G4EventManager.hh" 43 42 44 //....oooOO0OOooo........oooOO0OOooo........oo 43 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 45 44 46 TimeStepAction::TimeStepAction() : G4UserTimeS << 45 TimeStepAction::TimeStepAction() >> 46 : G4UserTimeStepAction() 47 { 47 { 48 AddTimeStep(1 * picosecond, 0.35 * picosecon << 48 AddTimeStep(1*picosecond, 0.35*picosecond); 49 AddTimeStep(10 * picosecond, 1 * picosecond) << 49 AddTimeStep(10*picosecond, 1*picosecond); 50 AddTimeStep(100 * picosecond, 3 * picosecond << 50 AddTimeStep(100*picosecond, 3*picosecond); 51 AddTimeStep(1000 * picosecond, 10 * picoseco << 51 AddTimeStep(1000*picosecond, 10*picosecond); 52 AddTimeStep(10000 * picosecond, 100 * picose << 52 AddTimeStep(10000*picosecond, 100*picosecond); 53 } 53 } 54 54 55 //....oooOO0OOooo........oooOO0OOooo........oo 55 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 56 56 57 TimeStepAction::~TimeStepAction() {} << 57 TimeStepAction::~TimeStepAction() >> 58 {} 58 59 59 //....oooOO0OOooo........oooOO0OOooo........oo 60 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 60 61 61 TimeStepAction::TimeStepAction(const TimeStepA << 62 TimeStepAction::TimeStepAction(const TimeStepAction& other) >> 63 : G4UserTimeStepAction(other) >> 64 {} 62 65 63 //....oooOO0OOooo........oooOO0OOooo........oo 66 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 64 67 65 TimeStepAction& TimeStepAction::operator=(cons << 68 TimeStepAction& >> 69 TimeStepAction::operator=(const TimeStepAction& rhs) 66 { 70 { 67 if (this == &rhs) return *this; << 71 if (this == &rhs) return *this; 68 return *this; << 72 return *this; 69 } 73 } 70 74 71 //....oooOO0OOooo........oooOO0OOooo........oo 75 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo...... 72 76 73 void TimeStepAction::UserReactionAction(const << 77 void TimeStepAction::UserReactionAction(const G4Track& trackA, 74 const << 78 const G4Track& trackB, >> 79 const std::vector<G4Track*>* >> 80 pProducts) 75 { 81 { 76 if (pProducts << 82 if(pProducts && (GetMolecule((*pProducts)[0])-> 77 && (GetMolecule((*pProducts)[0])->GetDef << 83 GetDefinition() != G4DamagedDeoxyribose::Definition())) 78 { << 84 { 79 return; << 85 return; 80 } << 86 } 81 << 87 82 // check for the case "no product" << 88 //check for the case "no product" 83 if (!pProducts) { << 89 if(!pProducts) 84 return; << 90 { 85 } << 91 return; 86 << 92 } 87 auto phyEventId = G4EventManager::GetEventMa << 93 88 << 94 auto phyEventId = G4EventManager::GetEventManager()-> 89 const G4Track* DNAElement = nullptr; << 95 GetConstCurrentEvent()->GetEventID(); 90 const G4Track* radical = nullptr; << 96 91 if (GetMolecule(&trackA)->GetDefinition() == << 97 const G4Track* DNAElement = nullptr; 92 DNAElement = &trackA; << 98 const G4Track* radical = nullptr; 93 radical = &trackB; << 99 if(GetMolecule(&trackA)-> 94 } << 100 GetDefinition() == G4Deoxyribose::Definition()) 95 else { << 101 { 96 DNAElement = &trackB; << 102 DNAElement = &trackA; 97 radical = &trackA; << 103 radical = &trackB; 98 } << 104 } 99 << 105 else 100 if (GetMolecule(radical)->GetDefinition() != << 106 { 101 return; << 107 DNAElement = &trackB; 102 } << 108 radical = &trackA; 103 << 109 } 104 G4AnalysisManager* analysisManager = G4Analy << 110 105 analysisManager->FillNtupleDColumn(2, 0, DNA << 111 if(GetMolecule(radical)->GetDefinition() != G4OH::Definition()) 106 analysisManager->FillNtupleDColumn(2, 1, DNA << 112 { 107 analysisManager->FillNtupleDColumn(2, 2, DNA << 113 return; 108 analysisManager->FillNtupleSColumn(2, 3, Get << 114 } 109 analysisManager->FillNtupleIColumn(2, 4, G4i << 115 110 analysisManager->AddNtupleRow(2); << 116 G4AnalysisManager* analysisManager = >> 117 G4AnalysisManager::Instance(); >> 118 analysisManager->FillNtupleDColumn(2, 0, >> 119 DNAElement->GetPosition().getX()/nm); >> 120 analysisManager->FillNtupleDColumn(2, 1, >> 121 DNAElement->GetPosition().getY()/nm); >> 122 analysisManager->FillNtupleDColumn(2, 2, >> 123 DNAElement->GetPosition().getZ()/nm); >> 124 analysisManager->FillNtupleSColumn(2, 3, >> 125 GetMolecule(radical)->GetName()); >> 126 analysisManager->FillNtupleIColumn(2, 4, >> 127 G4int(phyEventId)); >> 128 analysisManager->AddNtupleRow(2); 111 } 129 } >> 130 112 131