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Geant4/examples/extended/medical/dna/chem6/src/Run.cc

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Diff markup

Differences between /examples/extended/medical/dna/chem6/src/Run.cc (Version 11.3.0) and /examples/extended/medical/dna/chem6/src/Run.cc (Version 11.0.p1)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 // This example is provided by the Geant4-DNA      26 // This example is provided by the Geant4-DNA collaboration
 27 // chem6 example is derived from chem4 and che     27 // chem6 example is derived from chem4 and chem5 examples
 28 //                                                 28 //
 29 // Any report or published results obtained us     29 // Any report or published results obtained using the Geant4-DNA software
 30 // shall cite the following Geant4-DNA collabo     30 // shall cite the following Geant4-DNA collaboration publication:
 31 // J. Appl. Phys. 125 (2019) 104301                31 // J. Appl. Phys. 125 (2019) 104301
 32 // Med. Phys. 45 (2018) e722-e739                  32 // Med. Phys. 45 (2018) e722-e739
 33 // J. Comput. Phys. 274 (2014) 841-882             33 // J. Comput. Phys. 274 (2014) 841-882
 34 // Med. Phys. 37 (2010) 4692-4708                  34 // Med. Phys. 37 (2010) 4692-4708
 35 // Int. J. Model. Simul. Sci. Comput. 1 (2010)     35 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157-178
 36 // The Geant4-DNA web site is available at htt     36 // The Geant4-DNA web site is available at http://geant4-dna.org
 37 //                                                 37 //
 38 // Authors: W. G. Shin and S. Incerti (CENBG,      38 // Authors: W. G. Shin and S. Incerti (CENBG, France)
 39 //                                                 39 //
 40 // $Id$                                            40 // $Id$
 41 //                                                 41 //
 42 /// \file Run.cc                                   42 /// \file Run.cc
 43 /// \brief Implementation of the Run class         43 /// \brief Implementation of the Run class
 44                                                    44 
 45 #include "Run.hh"                                  45 #include "Run.hh"
 46                                                << 
 47 #include "RunAction.hh"                            46 #include "RunAction.hh"
 48 #include "ScoreSpecies.hh"                     << 
 49                                                    47 
 50 #include "G4Event.hh"                          << 
 51 #include "G4HCofThisEvent.hh"                  << 
 52 #include "G4RunManager.hh"                         48 #include "G4RunManager.hh"
                                                   >>  49 #include "G4Event.hh"
 53 #include "G4SDManager.hh"                          50 #include "G4SDManager.hh"
 54 #include "G4SystemOfUnits.hh"                  <<  51 #include "G4HCofThisEvent.hh"
 55 #include "G4THitsMap.hh"                           52 #include "G4THitsMap.hh"
                                                   >>  53 #include "G4SystemOfUnits.hh"
 56 #include "G4VSensitiveDetector.hh"                 54 #include "G4VSensitiveDetector.hh"
 57                                                    55 
 58 #include <map>                                     56 #include <map>
                                                   >>  57 
                                                   >>  58 #include "ScoreSpecies.hh"
 59 //....oooOO0OOooo........oooOO0OOooo........oo     59 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
 60                                                    60 
 61 Run::Run() : G4Run(), fSumEne(0), fScorerRun(0 <<  61 Run::Run()
                                                   >>  62  : G4Run(),
                                                   >>  63    fSumEne(0),
                                                   >>  64    fScorerRun(0),
                                                   >>  65    fLETScorerRun(0)
 62 {                                                  66 {
 63   G4MultiFunctionalDetector* mfdet = dynamic_c <<  67   G4MultiFunctionalDetector* mfdet =  dynamic_cast<G4MultiFunctionalDetector*>
 64     G4SDManager::GetSDMpointer()->FindSensitiv <<  68     (G4SDManager::GetSDMpointer()->FindSensitiveDetector("mfDetector"));
 65   G4int CollectionIDspecies = G4SDManager::Get <<  69   G4int CollectionIDspecies =
 66   G4int CollectionIDLET = G4SDManager::GetSDMp <<  70     G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/Species");
                                                   >>  71   G4int CollectionIDLET =
                                                   >>  72     G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/LET");
 67                                                    73 
 68   fTotalLET = new G4THitsMap<G4double>("mfDete <<  74   fTotalLET = new G4THitsMap<G4double>("mfDetector","LET");
 69   fScorerRun = mfdet->GetPrimitive(CollectionI     75   fScorerRun = mfdet->GetPrimitive(CollectionIDspecies);
 70   fLETScorerRun = mfdet->GetPrimitive(Collecti     76   fLETScorerRun = mfdet->GetPrimitive(CollectionIDLET);
 71 }                                                  77 }
 72                                                    78 
 73 //....oooOO0OOooo........oooOO0OOooo........oo     79 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
 74                                                    80 
 75 Run::~Run() {}                                 <<  81 Run::~Run()
                                                   >>  82 {
                                                   >>  83 }
 76                                                    84 
 77 //....oooOO0OOooo........oooOO0OOooo........oo     85 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
 78                                                    86 
 79 void Run::RecordEvent(const G4Event* event)        87 void Run::RecordEvent(const G4Event* event)
 80 {                                                  88 {
 81   if (event->IsAborted()) return;              <<  89   if(event->IsAborted()) return;
 82                                                    90 
 83   G4int CollectionID = G4SDManager::GetSDMpoin <<  91   G4int CollectionID =
                                                   >>  92     G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/Species");
 84                                                    93 
 85   G4int CollectionIDLET = G4SDManager::GetSDMp <<  94   G4int CollectionIDLET =
                                                   >>  95     G4SDManager::GetSDMpointer()->GetCollectionID("mfDetector/LET");
 86                                                    96 
 87   // Hits collections                          <<  97   //Hits collections
 88   //                                               98   //
 89   G4HCofThisEvent* HCE = event->GetHCofThisEve     99   G4HCofThisEvent* HCE = event->GetHCofThisEvent();
 90   if (!HCE) return;                            << 100   if(!HCE) return;
 91                                                   101 
 92   G4THitsMap<G4double>* evtMap = static_cast<G << 102   G4THitsMap<G4double>* evtMap =
                                                   >> 103   static_cast<G4THitsMap<G4double>*>(HCE->GetHC(CollectionID));
 93                                                   104 
 94   G4THitsMap<G4double>* evtLET = static_cast<G << 105   G4THitsMap<G4double>* evtLET =
                                                   >> 106   static_cast<G4THitsMap<G4double>*> (HCE->GetHC(CollectionIDLET));
 95                                                   107 
 96   G4int nOfMap = evtLET->entries();               108   G4int nOfMap = evtLET->entries();
 97                                                   109 
 98   G4int nOftotal = fTotalLET->entries();          110   G4int nOftotal = fTotalLET->entries();
 99                                                   111 
100   for (G4int i = 0; i < nOfMap; i++) {         << 112   for (G4int i=0; i<nOfMap; i++){
101     G4double* LET = (*evtLET)[i];                 113     G4double* LET = (*evtLET)[i];
102     if (!LET) continue;                        << 114     if(!LET) continue;
103     fTotalLET->add(nOftotal + i, *LET);        << 115     fTotalLET->add(nOftotal+i, *LET);
104   }                                               116   }
105                                                   117 
106   std::map<G4int, G4double*>::iterator itr;    << 118   std::map<G4int,G4double*>::iterator itr;
107                                                   119 
108   for (itr = evtMap->GetMap()->begin(); itr != << 120   for (itr = evtMap->GetMap()->begin(); itr != evtMap->GetMap()->end(); itr++){
109     G4double edep = *(itr->second);               121     G4double edep = *(itr->second);
110     fSumEne += edep;                           << 122     fSumEne+=edep;
111     //    G4cout<<"Energy for this event: "<<e << 123 //    G4cout<<"Energy for this event: "<<edep/eV<<" eV"<<G4endl;
112   }                                               124   }
113                                                   125 
114   G4Run::RecordEvent(event);                      126   G4Run::RecordEvent(event);
115 }                                                 127 }
116                                                   128 
117 //....oooOO0OOooo........oooOO0OOooo........oo    129 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
118                                                   130 
119 void Run::Merge(const G4Run* aRun)                131 void Run::Merge(const G4Run* aRun)
120 {                                                 132 {
121   if (aRun == this) {                          << 133   if(aRun == this){
122     return;                                       134     return;
123   }                                               135   }
124                                                   136 
125   const Run* localRun = static_cast<const Run*    137   const Run* localRun = static_cast<const Run*>(aRun);
126   fSumEne += localRun->fSumEne;                   138   fSumEne += localRun->fSumEne;
127                                                   139 
128   G4int nOfMaster = fTotalLET->entries();         140   G4int nOfMaster = fTotalLET->entries();
129   G4int nOfLocal = localRun->fTotalLET->entrie    141   G4int nOfLocal = localRun->fTotalLET->entries();
130   for (G4int i = 0; i < nOfLocal; i++) {       << 142   for(G4int i=0;i<nOfLocal;i++){
131     G4double* LET = (*localRun->fTotalLET)[i];    143     G4double* LET = (*localRun->fTotalLET)[i];
132     if (!LET) continue;                        << 144     if(!LET) continue;
133     fTotalLET->add(nOfMaster + i, *LET);       << 145     fTotalLET->add(nOfMaster+i,*LET);
134   }                                               146   }
135                                                   147 
136   ScoreSpecies* masterScorer = dynamic_cast<Sc << 148   ScoreSpecies* masterScorer =
                                                   >> 149   dynamic_cast<ScoreSpecies*>(this->fScorerRun);
137                                                   150 
138   ScoreSpecies* localScorer = dynamic_cast<Sco << 151   ScoreSpecies* localScorer =
                                                   >> 152   dynamic_cast<ScoreSpecies*>(localRun->fScorerRun);
139                                                   153 
140   masterScorer->AbsorbResultsFromWorkerScorer(    154   masterScorer->AbsorbResultsFromWorkerScorer(localScorer);
141   G4Run::Merge(aRun);                             155   G4Run::Merge(aRun);
142 }                                                 156 }
143                                                   157 
144 //....oooOO0OOooo........oooOO0OOooo........oo    158 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
145                                                   159