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1 // 1 //
2 // ******************************************* 2 // ********************************************************************
3 // * License and Disclaimer 3 // * License and Disclaimer *
4 // * 4 // * *
5 // * The Geant4 software is copyright of th 5 // * The Geant4 software is copyright of the Copyright Holders of *
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10 // * 10 // * *
11 // * Neither the authors of this software syst 11 // * Neither the authors of this software system, nor their employing *
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13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, *
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15 // * use. Please see the license in the file 15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitatio 16 // * for the full disclaimer and the limitation of liability. *
17 // * 17 // * *
18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you ag 21 // * any work based on the software) you agree to acknowledge its *
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24 // ******************************************* 24 // ********************************************************************
25 // 25 //
26 // This example is provided by the Geant4-DNA 26 // This example is provided by the Geant4-DNA collaboration
27 // chem6 example is derived from chem4 and che 27 // chem6 example is derived from chem4 and chem5 examples
28 // 28 //
29 // Any report or published results obtained us 29 // Any report or published results obtained using the Geant4-DNA software
30 // shall cite the following Geant4-DNA collabo 30 // shall cite the following Geant4-DNA collaboration publication:
31 // J. Appl. Phys. 125 (2019) 104301 31 // J. Appl. Phys. 125 (2019) 104301
32 // Med. Phys. 45 (2018) e722-e739 32 // Med. Phys. 45 (2018) e722-e739
33 // J. Comput. Phys. 274 (2014) 841-882 33 // J. Comput. Phys. 274 (2014) 841-882
34 // Med. Phys. 37 (2010) 4692-4708 34 // Med. Phys. 37 (2010) 4692-4708
35 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 35 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157-178
36 // The Geant4-DNA web site is available at htt 36 // The Geant4-DNA web site is available at http://geant4-dna.org
37 // 37 //
38 // Authors: W. G. Shin and S. Incerti (CENBG, 38 // Authors: W. G. Shin and S. Incerti (CENBG, France)
39 // 39 //
40 /// \file chem6.cc 40 /// \file chem6.cc
41 /// \brief Chem6 example 41 /// \brief Chem6 example
42 42
43 #include "ActionInitialization.hh" <<
44 #include "DetectorConstruction.hh" 43 #include "DetectorConstruction.hh"
45 #include "PhysicsList.hh" 44 #include "PhysicsList.hh"
>> 45 #include "ActionInitialization.hh"
46 46
47 #include "G4DNAChemistryManager.hh" <<
48 #include "G4RunManagerFactory.hh" 47 #include "G4RunManagerFactory.hh"
49 #include "G4UIExecutive.hh" << 48
>> 49 #include "G4DNAChemistryManager.hh"
50 #include "G4UImanager.hh" 50 #include "G4UImanager.hh"
>> 51 #include "G4UIExecutive.hh"
51 #include "G4VisExecutive.hh" 52 #include "G4VisExecutive.hh"
52 53
53 /* 54 /*
54 * WARNING : Geant4 was initially not intended 55 * WARNING : Geant4 was initially not intended for this kind of application
55 * This code is delivered as a prototype 56 * This code is delivered as a prototype
56 * We will be happy to hear from you, do not h 57 * We will be happy to hear from you, do not hesitate to send your feedback
57 * and communicate on the difficulties you may 58 * and communicate on the difficulties you may encounter
58 * The user interface may change in the next r 59 * The user interface may change in the next releases since a reiteration of
59 * the code has started 60 * the code has started
60 */ 61 */
61 62
62 //....oooOO0OOooo........oooOO0OOooo........oo 63 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
63 64
64 std::ofstream out; 65 std::ofstream out;
65 long seed = 0; 66 long seed = 0;
66 67
67 //....oooOO0OOooo........oooOO0OOooo........oo 68 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
68 69
69 int main(int argc, char** argv) 70 int main(int argc, char** argv)
70 { 71 {
71 out.open("Species.txt", std::ios::app); << 72 out.open("Species.txt",std::ios::app);
72 73
73 G4UIExecutive* ui = 0; 74 G4UIExecutive* ui = 0;
74 if (argc == 1) { << 75 if ( argc == 1 ) {
75 ui = new G4UIExecutive(argc, argv); 76 ui = new G4UIExecutive(argc, argv);
76 } 77 }
77 78
78 G4Random::setTheEngine(new CLHEP::RanecuEngi 79 G4Random::setTheEngine(new CLHEP::RanecuEngine);
79 80
80 auto* runManager = G4RunManagerFactory::Crea << 81 auto* runManager= G4RunManagerFactory::CreateRunManager();
81 82
82 // Set mandatory initialization classes 83 // Set mandatory initialization classes
83 runManager->SetUserInitialization(new Physic 84 runManager->SetUserInitialization(new PhysicsList());
84 runManager->SetUserInitialization(new Detect 85 runManager->SetUserInitialization(new DetectorConstruction());
85 runManager->SetUserInitialization(new Action 86 runManager->SetUserInitialization(new ActionInitialization());
86 87
87 // get the pointer to the User Interface man << 88 //get the pointer to the User Interface manager
88 G4UImanager* UI = G4UImanager::GetUIpointer( 89 G4UImanager* UI = G4UImanager::GetUIpointer();
89 90
90 if (argc > 1) // batch mode << 91 if (argc>1) // batch mode
91 { 92 {
92 G4String command = "/control/execute "; 93 G4String command = "/control/execute ";
93 G4String fileName = argv[1]; 94 G4String fileName = argv[1];
94 UI->ApplyCommand(command + fileName); << 95 UI->ApplyCommand(command+fileName);
95 } 96 }
96 97
97 else // define visualization and UI termina << 98 else //define visualization and UI terminal for interactive mode
98 { 99 {
99 UI->ApplyCommand("/control/execute beam.in 100 UI->ApplyCommand("/control/execute beam.in");
100 delete ui; 101 delete ui;
101 } 102 }
102 103
103 // Job termination 104 // Job termination
104 // Free the store: user actions, physics_lis 105 // Free the store: user actions, physics_list and detector_description are
105 // owned and deleted by the run manager, so 106 // owned and deleted by the run manager, so they should not be deleted
106 // in the main() program ! 107 // in the main() program !
107 out.close(); 108 out.close();
108 delete runManager; 109 delete runManager;
109 return 0; 110 return 0;
110 } 111 }
111 112
112 //....oooOO0OOooo........oooOO0OOooo........oo 113 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
113 114