| Geant4 Cross Reference |
1 // 1 //
2 // ******************************************* 2 // ********************************************************************
3 // * License and Disclaimer 3 // * License and Disclaimer *
4 // * 4 // * *
5 // * The Geant4 software is copyright of th 5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided 6 // * the Geant4 Collaboration. It is provided under the terms and *
7 // * conditions of the Geant4 Software License 7 // * conditions of the Geant4 Software License, included in the file *
8 // * LICENSE and available at http://cern.ch/ 8 // * LICENSE and available at http://cern.ch/geant4/license . These *
9 // * include a list of copyright holders. 9 // * include a list of copyright holders. *
10 // * 10 // * *
11 // * Neither the authors of this software syst 11 // * Neither the authors of this software system, nor their employing *
12 // * institutes,nor the agencies providing fin 12 // * institutes,nor the agencies providing financial support for this *
13 // * work make any representation or warran 13 // * work make any representation or warranty, express or implied, *
14 // * regarding this software system or assum 14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file 15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitatio 16 // * for the full disclaimer and the limitation of liability. *
17 // * 17 // * *
18 // * This code implementation is the result 18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboratio 19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distri 20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you ag 21 // * any work based on the software) you agree to acknowledge its *
22 // * use in resulting scientific publicati 22 // * use in resulting scientific publications, and indicate your *
23 // * acceptance of all terms of the Geant4 Sof 23 // * acceptance of all terms of the Geant4 Software license. *
24 // ******************************************* 24 // ********************************************************************
25 // 25 //
26 // This example is provided by the Geant4-DNA 26 // This example is provided by the Geant4-DNA collaboration
27 // Any report or published results obtained us 27 // Any report or published results obtained using the Geant4-DNA software
28 // shall cite the following Geant4-DNA collabo 28 // shall cite the following Geant4-DNA collaboration publication:
29 // Med. Phys. 37 (2010) 4692-4708 29 // Med. Phys. 37 (2010) 4692-4708
30 // J. Comput. Phys. 274 (2014) 841-882 30 // J. Comput. Phys. 274 (2014) 841-882
31 // The Geant4-DNA web site is available at htt 31 // The Geant4-DNA web site is available at http://geant4-dna.org
32 // 32 //
>> 33 // $Id$
33 // 34 //
34 /// \file TimeStepAction.hh 35 /// \file TimeStepAction.hh
35 /// \brief Implementation of the TimeStepActio 36 /// \brief Implementation of the TimeStepAction class
36 37
37 #include "TimeStepAction.hh" 38 #include "TimeStepAction.hh"
38 39
39 #include "G4MolecularConfiguration.hh" <<
40 #include "G4Molecule.hh" <<
41 #include "G4MoleculeTable.hh" <<
42 #include "G4SystemOfUnits.hh" <<
43 #include "G4UnitsTable.hh" <<
44 <<
45 #include <G4Scheduler.hh> 40 #include <G4Scheduler.hh>
>> 41 #include "G4UnitsTable.hh"
>> 42 #include "G4SystemOfUnits.hh"
>> 43 //#include "G4Molecule.hh"
46 44
47 TimeStepAction::TimeStepAction() : G4UserTimeS 45 TimeStepAction::TimeStepAction() : G4UserTimeStepAction()
48 { 46 {
49 /** 47 /**
50 * Give to G4ITTimeStepper the user defined 48 * Give to G4ITTimeStepper the user defined time steps
51 * eg : from 1 picosecond to 10 picosecond, 49 * eg : from 1 picosecond to 10 picosecond, the minimum time
52 * step that the TimeStepper can returned is 50 * step that the TimeStepper can returned is 0.1 picosecond.
53 * Those time steps are used for the chemist 51 * Those time steps are used for the chemistry of G4DNA
54 */ 52 */
55 53
56 AddTimeStep(1 * picosecond, 0.1 * picosecond << 54 AddTimeStep(1*picosecond, 0.1*picosecond);
57 AddTimeStep(10 * picosecond, 1 * picosecond) << 55 AddTimeStep(10*picosecond, 1*picosecond);
58 AddTimeStep(100 * picosecond, 3 * picosecond << 56 AddTimeStep(100*picosecond, 3*picosecond);
59 AddTimeStep(1000 * picosecond, 10 * picoseco << 57 AddTimeStep(1000*picosecond, 10*picosecond);
60 AddTimeStep(10000 * picosecond, 100 * picose << 58 AddTimeStep(10000*picosecond, 100*picosecond);
61 } 59 }
62 60
63 //....oooOO0OOooo........oooOO0OOooo........oo 61 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
64 62
65 void TimeStepAction::UserPostTimeStepAction() << 63 TimeStepAction::~TimeStepAction()
66 { 64 {
67 if (G4Scheduler::Instance()->GetGlobalTime() << 65 //dtor
68 G4cout << "_________________" << G4endl; << 66 }
69 G4cout << "At : " << G4BestUnit(G4Schedule <<
70 67
71 auto species = G4MoleculeTable::Instance() << 68 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
72 PrintSpecieInfo(species); << 69
73 } << 70 TimeStepAction::TimeStepAction(const TimeStepAction& other) :
>> 71 G4UserTimeStepAction(other)
>> 72 {
>> 73 //copy ctor
74 } 74 }
75 75
76 //....oooOO0OOooo........oooOO0OOooo........oo 76 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
77 77
78 void TimeStepAction::UserReactionAction(const << 78 TimeStepAction&
79 const << 79 TimeStepAction::operator=(const TimeStepAction& rhs)
80 { 80 {
81 // this function shows how to get species ID << 81 if (this == &rhs) return *this; // handle self assignment
82 G4cout << G4endl; << 82 //assignment operator
>> 83 return *this;
>> 84 }
83 85
84 G4cout << "At : " << G4Scheduler::Instance() << 86 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
85 << " (ns) reactantA = " << GetMolecul << 87
86 << " (ID number = " << reactantA.GetT << 88 void TimeStepAction::UserPostTimeStepAction()
87 << " at position : " << reactantA.Get << 89 {
88 << " reacts with reactantB = " << Get << 90 // G4cout << "_________________" << G4endl;
89 << " (ID number = " << reactantB.GetT << 91 /*
90 << " at position : " << reactantA.Get << 92 G4cout << "Time Step : "
91 << 93 << G4BestUnit(G4ITScheduler::Instance()->GetTimeStep(),
92 if (products) { << 94 "Time")
93 auto nbProducts = (G4int)products->size(); << 95 << G4endl;
94 for (G4int i = 0; i < nbProducts; i++) { << 96
95 G4cout << " creating product " << i << 97 G4cout << "End of step: "
96 << " position : " << (*products)[ << 98 << G4BestUnit(G4ITScheduler::Instance()->GetGlobalTime(),
97 } << 99 "Time")
98 } << 100 << G4endl;
99 G4cout << G4endl; << 101 */
100 } 102 }
101 103
102 void TimeStepAction::PrintSpecieInfo(G4Molecul << 104 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
>> 105
>> 106 void TimeStepAction::UserReactionAction(const G4Track&,
>> 107 const G4Track&,
>> 108 const std::vector<G4Track*>& /*products*/)
103 { 109 {
104 // this function shows how to get a specific << 110 /*
105 auto moleculeID = molconf->GetMoleculeID(); << 111 for (int i = 0 ; i < nbProducts ; i ++)
106 const G4String& moleculeName = molconf->GetF << 112 {
107 G4cout << "Get inf of : " << moleculeName << << 113 G4cout << "Product[" << i << "] : "
108 auto trackList = G4ITTrackHolder::Instance() << 114 << GetMolecule(products[i])->GetName()
109 << 115 << G4endl ;
110 if (trackList == nullptr) { <<
111 G4cout << "No species" << G4endl; <<
112 return; <<
113 } <<
114 G4TrackList::iterator it = trackList->begin( <<
115 G4TrackList::iterator end = trackList->end() <<
116 for (; it != end; ++it) { <<
117 auto track = *it; <<
118 G4cout << "TrackID: " << track->GetTrackID <<
119 << G4endl; <<
120 } 116 }
>> 117 */
121 } 118 }
122 119