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Geant4/examples/extended/medical/dna/AuNP/AuNP.cc

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Diff markup

Differences between /examples/extended/medical/dna/AuNP/AuNP.cc (Version 11.3.0) and /examples/extended/medical/dna/AuNP/AuNP.cc (Version 11.1.2)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
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 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
 26 /// \file medical/dna/AuNP/AuNP.cc                 26 /// \file medical/dna/AuNP/AuNP.cc
 27 /// \brief Main program of the medical/dna/AuN     27 /// \brief Main program of the medical/dna/AuNP example
 28 //                                                 28 //
 29 // $Id: w.cc 85260 2014-10-27 08:53:35Z gcosmo     29 // $Id: w.cc 85260 2014-10-27 08:53:35Z gcosmo $
 30 //                                             <<  30 // 
 31 //....oooOO0OOooo........oooOO0OOooo........oo     31 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 32 //....oooOO0OOooo........oooOO0OOooo........oo     32 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 33 #include "G4Types.hh"                              33 #include "G4Types.hh"
 34                                                    34 
 35 // #ifdef G4MULTITHREADED                      <<  35 //#ifdef G4MULTITHREADED
 36 // #include "G4MTRunManager.hh"                <<  36 //#include "G4MTRunManager.hh"
 37 // #else                                       <<  37 //#else
 38 // #include "G4RunManager.hh"                  <<  38 //#include "G4RunManager.hh"
 39 // #endif                                      <<  39 //#endif
 40                                                << 
 41 #include "ActionInitialization.hh"             << 
 42 #include "DetectorConstruction.hh"             << 
 43 #include "PhysicsList.hh"                      << 
 44 #include "SteppingVerbose.hh"                  << 
 45                                                    40 
                                                   >>  41 #include "Randomize.hh"
 46 #include "G4RunManagerFactory.hh"                  42 #include "G4RunManagerFactory.hh"
 47 #include "G4UIExecutive.hh"                    << 
 48 #include "G4UImanager.hh"                          43 #include "G4UImanager.hh"
                                                   >>  44 
 49 #include "G4VisExecutive.hh"                       45 #include "G4VisExecutive.hh"
 50 #include "Randomize.hh"                        <<  46 #include "G4UIExecutive.hh"
                                                   >>  47 
                                                   >>  48 #include "DetectorConstruction.hh"
                                                   >>  49 #include "PhysicsList.hh"
                                                   >>  50 #include "ActionInitialization.hh"
                                                   >>  51 #include "SteppingVerbose.hh"
 51                                                    52 
 52 //....oooOO0OOooo........oooOO0OOooo........oo     53 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 53 int main(int argc, char** argv)                <<  54 int main(int argc,char** argv) {
 54 {                                              <<  55   //delete output file
 55   // delete output file                        <<  56   remove ("outputAuNP.root");
 56   remove("outputAuNP.root");                   << 
 57                                                    57 
 58   // choose the Random engine                  <<  58   //choose the Random engine
 59   G4Random::setTheEngine(new CLHEP::RanecuEngi     59   G4Random::setTheEngine(new CLHEP::RanecuEngine);
 60                                                    60 
 61   // detect interactive mode (if no arguments) <<  61   //detect interactive mode (if no arguments) and define UI session
 62   G4UIExecutive* ui = nullptr;                     62   G4UIExecutive* ui = nullptr;
 63   if (argc == 1) {                             <<  63   if (argc == 1) { ui = new G4UIExecutive(argc,argv); }
 64     ui = new G4UIExecutive(argc, argv);        << 
 65   }                                            << 
 66                                                    64 
 67   auto* runManager = G4RunManagerFactory::Crea <<  65 auto* runManager = G4RunManagerFactory::CreateRunManager();
 68                                                    66 
 69   // Number of threads can be defined via 3rd      67   // Number of threads can be defined via 3rd argument
 70   if (argc == 4) {                             <<  68   if (argc==4) {
 71     G4int nThreads = G4UIcommand::ConvertToInt     69     G4int nThreads = G4UIcommand::ConvertToInt(argv[3]);
 72     runManager->SetNumberOfThreads(nThreads);      70     runManager->SetNumberOfThreads(nThreads);
 73   }                                                71   }
 74   G4cout << "##### AuNP started for " << runMa <<  72   G4cout << "##### AuNP started for " << runManager->GetNumberOfThreads()
 75          << " #####" << G4endl;                <<  73          << " threads" << " #####" << G4endl;
 76                                                    74 
 77   // set mandatory initialization classes      <<  75   //set mandatory initialization classes
 78   DetectorConstruction* det = new DetectorCons     76   DetectorConstruction* det = new DetectorConstruction;
 79   runManager->SetUserInitialization(det);          77   runManager->SetUserInitialization(det);
 80                                                <<  78      
 81   PhysicsList* phys = new PhysicsList;             79   PhysicsList* phys = new PhysicsList;
 82   runManager->SetUserInitialization(phys);         80   runManager->SetUserInitialization(phys);
 83                                                    81 
 84   runManager->SetUserInitialization(new Action     82   runManager->SetUserInitialization(new ActionInitialization());
 85                                                    83 
 86   // runManager->Initialize(); //execute in ma <<  84   //runManager->Initialize(); //execute in macro file
 87                                                    85 
 88   // initialize visualization                  <<  86   //initialize visualization
 89   G4VisManager* visManager = nullptr;              87   G4VisManager* visManager = nullptr;
 90                                                    88 
 91   // get the pointer to the User Interface man <<  89   //get the pointer to the User Interface manager
 92   G4UImanager* UImanager = G4UImanager::GetUIp     90   G4UImanager* UImanager = G4UImanager::GetUIpointer();
 93                                                    91 
 94   if (ui) {                                    <<  92   if (ui)  {
 95     // interactive mode                        <<  93     //interactive mode
 96     visManager = new G4VisExecutive;               94     visManager = new G4VisExecutive;
 97     visManager->Initialize();                      95     visManager->Initialize();
 98     ui->SessionStart();                            96     ui->SessionStart();
 99     delete ui;                                     97     delete ui;
100   }                                            <<  98   } else  {
101   else {                                       <<  99     //batch mode
102     // batch mode                              << 
103     G4String command = "/control/execute ";       100     G4String command = "/control/execute ";
104     G4String fileName = argv[1];                  101     G4String fileName = argv[1];
105     UImanager->ApplyCommand(command + fileName << 102     UImanager->ApplyCommand(command+fileName);
106   }                                               103   }
107                                                   104 
108   // job termination                           << 105   //job termination
109   delete visManager;                              106   delete visManager;
110   delete runManager;                              107   delete runManager;
111                                                   108 
112   return 0;                                       109   return 0;
113 }                                                 110 }
114                                                   111 
115 //....oooOO0OOooo........oooOO0OOooo........oo    112 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
116                                                   113