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Geant4/examples/extended/medical/DICOM/src/DicomRunAction.cc

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Diff markup

Differences between /examples/extended/medical/DICOM/src/DicomRunAction.cc (Version 11.3.0) and /examples/extended/medical/DICOM/src/DicomRunAction.cc (Version 10.0.p1)


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 25 //                                                 25 //
                                                   >>  26 // $Id: DicomRunAction.cc 74809 2013-10-22 09:49:26Z gcosmo $
 26 //                                                 27 //
 27 /// \file DicomRunAction.cc                        28 /// \file DicomRunAction.cc
 28 /// \brief Implementation of the DicomRunActio     29 /// \brief Implementation of the DicomRunAction class
 29 //                                                 30 //
 30                                                    31 
 31 #include "DicomRunAction.hh"                       32 #include "DicomRunAction.hh"
 32                                                << 
 33 #include "DicomRun.hh"                             33 #include "DicomRun.hh"
 34                                                    34 
 35 //-- In order to obtain detector information.      35 //-- In order to obtain detector information.
 36 #include "G4RunManager.hh"                     <<  36 #include <fstream>
 37 #include "G4SystemOfUnits.hh"                  <<  37 #include <iomanip>
 38 #include "G4THitsMap.hh"                           38 #include "G4THitsMap.hh"
                                                   >>  39 
 39 #include "G4UnitsTable.hh"                         40 #include "G4UnitsTable.hh"
                                                   >>  41 #include "G4SystemOfUnits.hh"
 40                                                    42 
 41 #include <fstream>                             <<  43 #include "G4RunManager.hh"
 42 #include <iomanip>                             <<  44 
                                                   >>  45 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
                                                   >>  46 
                                                   >>  47 DicomRunAction* DicomRunAction::fgInstance = 0;
                                                   >>  48 
                                                   >>  49 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
                                                   >>  50 
                                                   >>  51 DicomRunAction* DicomRunAction::Instance() { return fgInstance; }
 43                                                    52 
 44 //....oooOO0OOooo........oooOO0OOooo........oo     53 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 45 /// Constructor                                    54 /// Constructor
 46 DicomRunAction::DicomRunAction() : G4UserRunAc <<  55 DicomRunAction::DicomRunAction()
                                                   >>  56 :   G4UserRunAction(), dcmrun(0), fFieldValue(14)
 47 {                                                  57 {
 48   // - Prepare data member for DicomRun.       <<  58     // - Prepare data member for DicomRun.
 49   //   vector represents a list of MultiFuncti <<  59     //   vector represents a list of MultiFunctionalDetector names.
 50   fSDName.push_back(G4String("phantomSD"));    <<  60     fSDName.push_back(G4String("phantomSD"));
                                                   >>  61     fgInstance = this;
 51 }                                                  62 }
 52                                                    63 
 53 //....oooOO0OOooo........oooOO0OOooo........oo     64 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 54 /// Destructor.                                    65 /// Destructor.
 55 DicomRunAction::~DicomRunAction()                  66 DicomRunAction::~DicomRunAction()
 56 {                                                  67 {
 57   fSDName.clear();                             <<  68     fSDName.clear();
                                                   >>  69     fgInstance = 0;
 58 }                                                  70 }
 59                                                    71 
 60 //....oooOO0OOooo........oooOO0OOooo........oo     72 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 61 G4Run* DicomRunAction::GenerateRun()               73 G4Run* DicomRunAction::GenerateRun()
 62 {                                                  74 {
 63   // Generate new RUN object, which is special <<  75     // Generate new RUN object, which is specially
 64   // dedicated for MultiFunctionalDetector sch <<  76     // dedicated for MultiFunctionalDetector scheme.
 65   //  Detail description can be found in Dicom <<  77     //  Detail description can be found in DicomRun.hh/cc.
 66   // return new DicomRun(fSDName);             <<  78     //return new DicomRun(fSDName);
 67   return fDcmrun = new DicomRun(fSDName);      <<  79     return dcmrun = new DicomRun(fSDName);
 68 }                                                  80 }
 69                                                    81 
 70 //....oooOO0OOooo........oooOO0OOooo........oo     82 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 71 void DicomRunAction::BeginOfRunAction(const G4     83 void DicomRunAction::BeginOfRunAction(const G4Run* aRun)
 72 {                                                  84 {
 73   G4cout << "### Run " << aRun->GetRunID() <<  <<  85     G4cout << "### Run " << aRun->GetRunID() << " start." << G4endl;
 74   // inform the runManager to save random numb <<  86     //inform the runManager to save random number seed
 75   G4RunManager::GetRunManager()->SetRandomNumb <<  87     G4RunManager::GetRunManager()->SetRandomNumberStore(false);
 76   G4RunManager::GetRunManager()->SetRandomNumb << 
 77   G4RunManager::GetRunManager()->SetRandomNumb << 
 78                                                << 
 79                                                << 
 80   G4int progress = aRun->GetNumberOfEventToBeP << 
 81   progress = (progress < 1) ? 1 : progress;    << 
 82   G4RunManager::GetRunManager()->SetPrintProgr << 
 83 }                                                  88 }
 84                                                    89 
 85 //....oooOO0OOooo........oooOO0OOooo........oo     90 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 86 void DicomRunAction::EndOfRunAction(const G4Ru     91 void DicomRunAction::EndOfRunAction(const G4Run* aRun)
 87 {                                                  92 {
 88   G4int nofEvents = aRun->GetNumberOfEvent();  <<  93     G4int nofEvents = aRun->GetNumberOfEvent();
                                                   >>  94     if (nofEvents == 0) return;
                                                   >>  95     //print
                                                   >>  96     //
 89                                                    97 
 90   static G4double local_total_dose = 0;        <<  98     static double local_total_dose = 0;
 91   G4double total_dose = 0;                     <<  99     double total_dose = 0;
 92                                                   100 
 93   const DicomRun* reRun = static_cast<const Di << 101     const DicomRun* reRun = static_cast<const DicomRun*>(aRun);
 94   //--- Dump all scored quantities involved in << 102     //--- Dump all scored quantities involved in DicomRun.
 95   for (G4int i = 0; i < (G4int)fSDName.size(); << 103     for ( G4int i = 0; i < (G4int)fSDName.size(); i++ ){
 96     //                                         << 104         //
 97     //---------------------------------------- << 105         //---------------------------------------------
 98     // Dump accumulated quantities for this RU << 106         // Dump accumulated quantities for this RUN.
 99     //  (Display only central region of x-y pl << 107         //  (Display only central region of x-y plane)
100     //      0       ConcreteSD/DoseDeposit     << 108         //      0       ConcreteSD/DoseDeposit
101     //---------------------------------------- << 109         //---------------------------------------------
102     G4THitsMap<G4double>* DoseDeposit = reRun- << 110         G4THitsMap<G4double>* DoseDeposit = reRun->GetHitsMap(fSDName[i]+"/DoseDeposit");
103                                                << 111 
104     if (DoseDeposit && DoseDeposit->GetMap()-> << 112         if( DoseDeposit && DoseDeposit->GetMap()->size() != 0 ) {
105       std::map<G4int, G4double*>::iterator itr << 113             std::map<G4int,G4double*>::iterator itr = DoseDeposit->GetMap()->begin();
106       for (; itr != DoseDeposit->GetMap()->end << 114             for(; itr != DoseDeposit->GetMap()->end(); itr++) {
107         if (!IsMaster()) {                     << 115                 if(!IsMaster()) { local_total_dose += *(itr->second); }
108           local_total_dose += *(itr->second);  << 116                 total_dose += *(itr->second);
                                                   >> 117             }
109         }                                         118         }
110         total_dose += *(itr->second);          << 119 
111       }                                        << 
112     }                                             120     }
113   }                                            << 121     
                                                   >> 122     if (IsMaster())
                                                   >> 123     {
                                                   >> 124         G4cout
                                                   >> 125         << "\n--------------------End of Global Run-----------------------"
                                                   >> 126         << " \n The run was " << nofEvents << " events " << G4endl;
                                                   >> 127         G4cout << "LOCAL TOTAL DOSE : \t" << local_total_dose/gray << " Gy" << std::endl;
                                                   >> 128         G4cout << "      TOTAL DOSE : \t" << total_dose/gray << " Gy" << std::endl;
114                                                   129 
115   if (IsMaster()) {                            << 130     }
116     G4cout << "--------------------End of Glob << 131     else
117     G4cout << " The run was " << nofEvents <<  << 132     {
118     G4cout << "LOCAL TOTAL DOSE : \t" << local << 133         G4cout
119     G4cout << "      TOTAL DOSE : \t" << total << 134         << "\n--------------------End of Local Run------------------------"
120   }                                            << 135         << " \n The run was " << nofEvents << G4endl;
121   else {                                       << 136         G4cout << "LOCAL TOTAL DOSE : \t" << local_total_dose/gray << " Gy" << std::endl;
122     G4cout << "--------------------End of Loca << 137         G4cout << "      TOTAL DOSE : \t" << total_dose/gray << " Gy" << std::endl;
123     G4cout << " The run was " << nofEvents <<  << 
124     G4cout << "LOCAL TOTAL DOSE : \t" << local << 
125     G4cout << "      TOTAL DOSE : \t" << total << 
126   }                                            << 
127                                                   138 
128   if (IsMaster()) {                            << 139     }
129     G4cout << " ###### EndOfRunAction ###### " << 
130     //- DicomRun object.                       << 
131     const DicomRun* re02Run = static_cast<cons << 
132     //--- Dump all scored quantities involved  << 
133                                                   140 
134     for (G4int i = 0; i < (G4int)fSDName.size( << 141     if(IsMaster()) {
135       //                                       << 142         G4cout << " ###### EndOfRunAction ###### " << G4endl;
136       //-------------------------------------- << 143         //- DicomRun object.
137       // Dump accumulated quantities for this  << 144         const DicomRun* re02Run = static_cast<const DicomRun*>(aRun);
138       //  (Display only central region of x-y  << 145         //--- Dump all scored quantities involved in DicomRun.
139       //      0       ConcreteSD/DoseDeposit   << 146 
140       //-------------------------------------- << 147         for ( G4int i = 0; i < (G4int)fSDName.size(); i++ ){
141       G4THitsMap<G4double>* DoseDeposit = re02 << 148             //
142                                                << 149             //---------------------------------------------
143       G4cout << "============================= << 150             // Dump accumulated quantities for this RUN.
144       G4cout << " Number of event processed :  << 151             //  (Display only central region of x-y plane)
145       G4cout << "============================= << 152             //      0       ConcreteSD/DoseDeposit
146                                                << 153             //---------------------------------------------
147       std::ofstream fileout;                   << 154             G4THitsMap<G4double>* DoseDeposit = re02Run->GetHitsMap(fSDName[i]+"/DoseDeposit");
148       G4String fname = "dicom.out";            << 155 
149       fileout.open(fname);                     << 156             G4cout << "=============================================================" <<G4endl;
150       G4cout << " opened file " << fname << "  << 157             G4cout << " Number of event processed : "<< aRun->GetNumberOfEvent() << G4endl;
151                                                << 158             G4cout << "=============================================================" <<G4endl;
152       if (DoseDeposit && DoseDeposit->GetMap() << 159 
153         std::ostream* myout = &G4cout;         << 160             std::ofstream fileout;
154         PrintHeader(myout);                    << 161             G4String fname = "dicom.out";
155         std::map<G4int, G4double*>::iterator i << 162             fileout.open(fname);
156         for (; itr != DoseDeposit->GetMap()->e << 163             G4cout << " opened file " << fname << " for dose output" << G4endl;
157           fileout << itr->first << "     " <<  << 164 
158           // G4cout << "    " << itr->first    << 165 
159           //        << "     " << std::setprec << 166             if( DoseDeposit && DoseDeposit->GetMap()->size() != 0 ) {
160           //        << *(itr->second)/CLHEP::g << 167                 std::ostream *myout = &G4cout;
161           //        << G4endl;                 << 168                 PrintHeader(myout);
                                                   >> 169                 std::map<G4int,G4double*>::iterator itr = DoseDeposit->GetMap()->begin();
                                                   >> 170                 for(; itr != DoseDeposit->GetMap()->end(); itr++) {
                                                   >> 171                     fileout <<  itr->first
                                                   >> 172                     << "     "  << *(itr->second)/CLHEP::gray
                                                   >> 173                     << G4endl;
                                                   >> 174                     G4cout << "    " << itr->first
                                                   >> 175                     << "     " << std::setprecision(6) << *(itr->second)/CLHEP::gray << " Gy"
                                                   >> 176                     << G4endl;
                                                   >> 177                 }
                                                   >> 178                 G4cout << "============================================="<<G4endl;
                                                   >> 179             } else {
                                                   >> 180                 G4Exception("DicomRunAction", "000", JustWarning, 
                                                   >> 181              "DoseDeposit HitsMap is either a null pointer of the HitsMap was empty");
                                                   >> 182             }
                                                   >> 183             fileout.close();
                                                   >> 184             G4cout << " closed file " << fname << " for dose output" << G4endl;
                                                   >> 185             
162         }                                         186         }
163         G4cout << "=========================== << 
164       }                                        << 
165       else {                                   << 
166         G4Exception("DicomRunAction", "000", J << 
167                     "DoseDeposit HitsMap is ei << 
168       }                                        << 
169       fileout.close();                         << 
170       G4cout << " closed file " << fname << "  << 
171     }                                             187     }
172   }                                            << 
173                                                   188 
174   G4cout << "Finished : End of Run Action " << << 189     G4cout << "Finished : End of Run Action " << aRun->GetRunID() << G4endl;
                                                   >> 190 
175 }                                                 191 }
176                                                   192 
177 //....oooOO0OOooo........oooOO0OOooo........oo    193 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
178 void DicomRunAction::PrintHeader(std::ostream* << 194 void DicomRunAction::PrintHeader(std::ostream *out)
179 {                                                 195 {
180   std::vector<G4String> vecScoreName;             196   std::vector<G4String> vecScoreName;
181   vecScoreName.push_back("DoseDeposit");          197   vecScoreName.push_back("DoseDeposit");
182                                                   198 
183   // head line                                    199   // head line
184   //                                              200   //
185   std::string vname;                              201   std::string vname;
186   *out << std::setw(10) << "Voxel"             << 202   *out << std::setw(10) << "Voxel" << " |";
187        << " |";                                << 203   for (std::vector<G4String>::iterator it = vecScoreName.begin();
188   for (std::vector<G4String>::iterator it = ve << 204        it != vecScoreName.end(); it++) {
189     // vname = FillString((*it),               << 205       //vname = FillString((*it),
190     //                        ' ',             << 206 //                       ' ',
191     //                        FieldValue+1,    << 207 //                       FieldValue+1,
192     //                        false);          << 208 //                       false);
193     //     *out << vname << '|';               << 209 //    *out << vname << '|';
194     *out << std::setw(fFieldValue) << (*it) << << 210       *out << std::setw(fFieldValue) << (*it) << "  |";
195   }                                               211   }
196   *out << G4endl;                                 212   *out << G4endl;
197 }                                                 213 }
198                                                   214 
199 //....oooOO0OOooo........oooOO0OOooo........oo    215 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
200 std::string DicomRunAction::FillString(const s << 216 std::string DicomRunAction::FillString(const std::string &name,
                                                   >> 217                                        char c, G4int n, G4bool back)
201 {                                                 218 {
202   std::string fname("");                          219   std::string fname("");
203   G4int k = G4int(n - name.size());            << 220   G4int k = n - name.size();
204   if (k > 0) {                                    221   if (k > 0) {
205     if (back) {                                   222     if (back) {
206       fname = name;                               223       fname = name;
207       fname += std::string(k, c);              << 224       fname += std::string(k,c);
208     }                                             225     }
209     else {                                        226     else {
210       fname = std::string(k, c);               << 227       fname = std::string(k,c);
211       fname += name;                              228       fname += name;
212     }                                             229     }
213   }                                               230   }
214   else {                                          231   else {
215     fname = name;                                 232     fname = name;
216   }                                               233   }
217   return fname;                                   234   return fname;
218 }                                                 235 }
219                                                   236