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26 // 26 //
27 /// \file medical/DICOM/DICOM.cc 27 /// \file medical/DICOM/DICOM.cc
28 /// \brief Main program of the medical/DICOM e 28 /// \brief Main program of the medical/DICOM example
29 // 29 //
30 // The code was written by : 30 // The code was written by :
31 // *Louis Archambault louis.archambault 31 // *Louis Archambault louis.archambault@phy.ulaval.ca,
32 // *Luc Beaulieu beaulieu@phy.ulaval.ca 32 // *Luc Beaulieu beaulieu@phy.ulaval.ca
33 // +Vincent Hubert-Tremblay at tigre.2@sy 33 // +Vincent Hubert-Tremblay at tigre.2@sympatico.ca
34 // 34 //
35 // 35 //
36 // *Centre Hospitalier Universitaire de Quebec 36 // *Centre Hospitalier Universitaire de Quebec (CHUQ),
37 // Hotel-Dieu de Quebec, departement de Radio- 37 // Hotel-Dieu de Quebec, departement de Radio-oncologie
38 // 11 cote du palais. Quebec, QC, Canada, G1R 38 // 11 cote du palais. Quebec, QC, Canada, G1R 2J6
39 // tel (418) 525-4444 #6720 39 // tel (418) 525-4444 #6720
40 // fax (418) 691 5268 40 // fax (418) 691 5268
41 // 41 //
42 // + Université Laval, Québec (QC) Canada 42 // + Université Laval, Québec (QC) Canada
43 // ******************************************* 43 // *******************************************************
44 #include "DicomActionInitialization.hh" << 44 #include "G4Types.hh"
45 #include "DicomNestedParamDetectorConstruction <<
46 #include "DicomPartialDetectorConstruction.hh" <<
47 #include "DicomRegularDetectorConstruction.hh" <<
48 45
49 #include "G4GenericPhysicsList.hh" <<
50 #include "G4RunManagerFactory.hh" 46 #include "G4RunManagerFactory.hh"
51 #include "G4Types.hh" << 47
>> 48 #include "globals.hh"
52 #include "G4UImanager.hh" 49 #include "G4UImanager.hh"
53 #include "Randomize.hh" 50 #include "Randomize.hh"
54 #include "globals.hh" << 51
>> 52 #include "G4GenericPhysicsList.hh"
>> 53
>> 54 #include "DicomRegularDetectorConstruction.hh"
>> 55 #include "DicomNestedParamDetectorConstruction.hh"
>> 56 #include "DicomPartialDetectorConstruction.hh"
>> 57
>> 58 #include "DicomActionInitialization.hh"
55 59
56 #ifdef G4_DCMTK 60 #ifdef G4_DCMTK
57 # include "DicomFileMgr.hh" << 61 # include "DicomFileMgr.hh"
58 #else 62 #else
59 # include "DicomHandler.hh" << 63 # include "DicomHandler.hh"
60 #endif 64 #endif
61 65
62 #include "DicomIntersectVolume.hh" 66 #include "DicomIntersectVolume.hh"
63 #include "QGSP_BIC.hh" 67 #include "QGSP_BIC.hh"
64 #include "Shielding.hh" << 68 #include "G4tgrMessenger.hh"
65 69
66 #include "G4UIExecutive.hh" <<
67 #include "G4VisExecutive.hh" 70 #include "G4VisExecutive.hh"
68 #include "G4tgrMessenger.hh" << 71 #include "G4UIExecutive.hh"
>> 72
>> 73 #include "Shielding.hh"
69 74
70 //....oooOO0OOooo........oooOO0OOooo........oo 75 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
71 76
72 int main(int argc, char** argv) << 77 int main(int argc,char** argv)
73 { 78 {
74 // Instantiate G4UIExecutive if interactive 79 // Instantiate G4UIExecutive if interactive mode
75 G4UIExecutive* ui = nullptr; 80 G4UIExecutive* ui = nullptr;
76 if (argc == 1) { << 81 if ( argc == 1 ) {
77 ui = new G4UIExecutive(argc, argv); 82 ui = new G4UIExecutive(argc, argv);
78 } 83 }
79 84
80 new G4tgrMessenger; 85 new G4tgrMessenger;
81 char* part = std::getenv("DICOM_PARTIAL_PARA << 86 char* part = std::getenv( "DICOM_PARTIAL_PARAM" );
82 G4bool bPartial = FALSE; 87 G4bool bPartial = FALSE;
83 if (part && G4String(part) == "1") { << 88 if( part && G4String(part) == "1" ) {
84 bPartial = TRUE; 89 bPartial = TRUE;
85 } 90 }
86 91
87 CLHEP::HepRandom::setTheEngine(new CLHEP::Ra 92 CLHEP::HepRandom::setTheEngine(new CLHEP::RanecuEngine);
88 CLHEP::HepRandom::setTheSeed(G4long(24534575 93 CLHEP::HepRandom::setTheSeed(G4long(24534575684783));
89 G4long seeds[2]; 94 G4long seeds[2];
90 seeds[0] = G4long(534524575674523); 95 seeds[0] = G4long(534524575674523);
91 seeds[1] = G4long(526345623452457); 96 seeds[1] = G4long(526345623452457);
92 CLHEP::HepRandom::setTheSeeds(seeds); 97 CLHEP::HepRandom::setTheSeeds(seeds);
93 98
94 // Construct the default run manager 99 // Construct the default run manager
95 char* nthread_c = std::getenv("DICOM_NTHREAD 100 char* nthread_c = std::getenv("DICOM_NTHREADS");
96 101
97 unsigned nthreads = 4; 102 unsigned nthreads = 4;
98 unsigned env_threads = 0; 103 unsigned env_threads = 0;
99 104
100 if (nthread_c) { << 105 if(nthread_c) {env_threads=unsigned(G4UIcommand::ConvertToDouble(nthread_c));}
101 env_threads = unsigned(G4UIcommand::Conver << 106 if(env_threads > 0) {nthreads=env_threads;}
102 } <<
103 if (env_threads > 0) { <<
104 nthreads = env_threads; <<
105 } <<
106 107
107 auto* runManager = G4RunManagerFactory::Crea 108 auto* runManager = G4RunManagerFactory::CreateRunManager();
108 runManager->SetNumberOfThreads(nthreads); 109 runManager->SetNumberOfThreads(nthreads);
109 110
110 DicomDetectorConstruction* theGeometry = 0; 111 DicomDetectorConstruction* theGeometry = 0;
111 112
112 #ifdef G4_DCMTK 113 #ifdef G4_DCMTK
113 DicomFileMgr* theFileMgr = 0; 114 DicomFileMgr* theFileMgr = 0;
114 #else 115 #else
115 DicomHandler* dcmHandler = 0; 116 DicomHandler* dcmHandler = 0;
116 #endif 117 #endif
117 118
118 if (!bPartial) { << 119 if( !bPartial ){
119 #ifdef G4_DCMTK 120 #ifdef G4_DCMTK
120 121
121 theFileMgr = DicomFileMgr::GetInstance(); 122 theFileMgr = DicomFileMgr::GetInstance();
122 theFileMgr->Convert("Data.dat"); 123 theFileMgr->Convert("Data.dat");
123 124
124 #else 125 #else
125 // Treatment of DICOM images before creati 126 // Treatment of DICOM images before creating the G4runManager
126 dcmHandler = DicomHandler::Instance(); 127 dcmHandler = DicomHandler::Instance();
127 dcmHandler->CheckFileFormat(); 128 dcmHandler->CheckFileFormat();
128 #endif 129 #endif
129 130
130 // Initialisation of physics, geometry, pr 131 // Initialisation of physics, geometry, primary particles ...
131 char* nest = std::getenv("DICOM_NESTED_PAR << 132 char* nest = std::getenv( "DICOM_NESTED_PARAM" );
132 if (nest && G4String(nest) == "1") { << 133 if( nest && G4String(nest) == "1" ) {
133 theGeometry = new DicomNestedParamDetect 134 theGeometry = new DicomNestedParamDetectorConstruction();
134 } << 135 } else {
135 else { <<
136 theGeometry = new DicomRegularDetectorCo 136 theGeometry = new DicomRegularDetectorConstruction();
137 } 137 }
138 } << 138 } else {
139 else { <<
140 theGeometry = new DicomPartialDetectorCons 139 theGeometry = new DicomPartialDetectorConstruction();
141 } 140 }
142 runManager->SetUserInitialization(theGeometr 141 runManager->SetUserInitialization(theGeometry);
143 142
144 // std::vector<G4String>* MyConstr = new 143 // std::vector<G4String>* MyConstr = new std::vector<G4String>;
145 // MyConstr->push_back("G4EmStandardPhysi 144 // MyConstr->push_back("G4EmStandardPhysics");
146 // G4VModularPhysicsList* phys = new G4Ge 145 // G4VModularPhysicsList* phys = new G4GenericPhysicsList(MyConstr);
147 G4VModularPhysicsList* phys = new Shielding( 146 G4VModularPhysicsList* phys = new Shielding();
148 runManager->SetUserInitialization(phys); 147 runManager->SetUserInitialization(phys);
149 148
150 // Set user action classes 149 // Set user action classes
151 runManager->SetUserInitialization(new DicomA 150 runManager->SetUserInitialization(new DicomActionInitialization());
152 151
153 runManager->Initialize(); 152 runManager->Initialize();
154 153
155 new DicomIntersectVolume(); 154 new DicomIntersectVolume();
156 155
157 // visualisation manager 156 // visualisation manager
158 G4VisManager* visManager = new G4VisExecutiv 157 G4VisManager* visManager = new G4VisExecutive;
159 visManager->Initialize(); 158 visManager->Initialize();
160 159
161 G4UImanager* UImanager = G4UImanager::GetUIp 160 G4UImanager* UImanager = G4UImanager::GetUIpointer();
162 161
163 if (ui) { << 162 if (ui)
164 UImanager->ApplyCommand("/control/execute << 163 {
165 ui->SessionStart(); << 164 UImanager->ApplyCommand("/control/execute vis.mac");
166 delete ui; << 165 ui->SessionStart();
167 } << 166 delete ui;
168 else { << 167 }
169 G4String command = "/control/execute "; << 168 else
170 G4String fileName = argv[1]; << 169 {
171 UImanager->ApplyCommand(command + fileName << 170 G4String command = "/control/execute ";
172 } << 171 G4String fileName = argv[1];
>> 172 UImanager->ApplyCommand(command+fileName);
>> 173 }
173 174
174 delete visManager; 175 delete visManager;
175 delete runManager; 176 delete runManager;
176 177
177 if (!bPartial) { << 178 if( !bPartial ) {
178 #ifdef G4_DCMTK 179 #ifdef G4_DCMTK
179 delete theFileMgr; 180 delete theFileMgr;
180 #endif 181 #endif
181 } 182 }
182 183
183 return 0; 184 return 0;
184 } 185 }
>> 186
185 187