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25 // 25 //
>> 26 // $Id: DICOM.cc 83429 2014-08-21 15:47:32Z gcosmo $
26 // 27 //
27 /// \file medical/DICOM/DICOM.cc 28 /// \file medical/DICOM/DICOM.cc
28 /// \brief Main program of the medical/DICOM e 29 /// \brief Main program of the medical/DICOM example
29 // 30 //
30 // The code was written by : 31 // The code was written by :
31 // *Louis Archambault louis.archambault 32 // *Louis Archambault louis.archambault@phy.ulaval.ca,
32 // *Luc Beaulieu beaulieu@phy.ulaval.ca 33 // *Luc Beaulieu beaulieu@phy.ulaval.ca
33 // +Vincent Hubert-Tremblay at tigre.2@sy 34 // +Vincent Hubert-Tremblay at tigre.2@sympatico.ca
34 // 35 //
35 // 36 //
36 // *Centre Hospitalier Universitaire de Quebec 37 // *Centre Hospitalier Universitaire de Quebec (CHUQ),
37 // Hotel-Dieu de Quebec, departement de Radio- 38 // Hotel-Dieu de Quebec, departement de Radio-oncologie
38 // 11 cote du palais. Quebec, QC, Canada, G1R 39 // 11 cote du palais. Quebec, QC, Canada, G1R 2J6
39 // tel (418) 525-4444 #6720 40 // tel (418) 525-4444 #6720
40 // fax (418) 691 5268 41 // fax (418) 691 5268
41 // 42 //
42 // + Université Laval, Québec (QC) Canada << 43 // + Université Laval, Québec (QC) Canada
43 // ******************************************* << 44 //*******************************************************//
44 #include "DicomActionInitialization.hh" <<
45 #include "DicomNestedParamDetectorConstruction <<
46 #include "DicomPartialDetectorConstruction.hh" <<
47 #include "DicomRegularDetectorConstruction.hh" <<
48 45
49 #include "G4GenericPhysicsList.hh" <<
50 #include "G4RunManagerFactory.hh" <<
51 #include "G4Types.hh" <<
52 #include "G4UImanager.hh" <<
53 #include "Randomize.hh" <<
54 #include "globals.hh" <<
55 46
56 #ifdef G4_DCMTK << 47 #ifdef G4MULTITHREADED
57 # include "DicomFileMgr.hh" << 48 #include "G4MTRunManager.hh"
58 #else 49 #else
59 # include "DicomHandler.hh" << 50 #include "G4RunManager.hh"
60 #endif 51 #endif
61 52
>> 53 #include "globals.hh"
>> 54 #include "G4UImanager.hh"
>> 55 #include "Randomize.hh"
>> 56
>> 57 #include "G4GenericPhysicsList.hh"
>> 58
>> 59 #include "DicomRegularDetectorConstruction.hh"
>> 60 #include "DicomNestedParamDetectorConstruction.hh"
>> 61 #include "DicomPartialDetectorConstruction.hh"
>> 62
>> 63 #include "DicomActionInitialization.hh"
>> 64
>> 65 #include "DicomHandler.hh"
62 #include "DicomIntersectVolume.hh" 66 #include "DicomIntersectVolume.hh"
63 #include "QGSP_BIC.hh" 67 #include "QGSP_BIC.hh"
64 #include "Shielding.hh" << 68 #include "G4tgrMessenger.hh"
65 69
66 #include "G4UIExecutive.hh" << 70 #ifdef G4VIS_USE
67 #include "G4VisExecutive.hh" 71 #include "G4VisExecutive.hh"
68 #include "G4tgrMessenger.hh" << 72 #endif
>> 73
>> 74 #ifdef G4UI_USE
>> 75 #include "G4UIExecutive.hh"
>> 76 #endif
69 77
70 //....oooOO0OOooo........oooOO0OOooo........oo << 78 //=================================================================================
71 79
72 int main(int argc, char** argv) << 80 int main(int argc,char** argv)
73 { 81 {
74 // Instantiate G4UIExecutive if interactive <<
75 G4UIExecutive* ui = nullptr; <<
76 if (argc == 1) { <<
77 ui = new G4UIExecutive(argc, argv); <<
78 } <<
79 <<
80 new G4tgrMessenger; <<
81 char* part = std::getenv("DICOM_PARTIAL_PARA <<
82 G4bool bPartial = FALSE; <<
83 if (part && G4String(part) == "1") { <<
84 bPartial = TRUE; <<
85 } <<
86 <<
87 CLHEP::HepRandom::setTheEngine(new CLHEP::Ra <<
88 CLHEP::HepRandom::setTheSeed(G4long(24534575 <<
89 G4long seeds[2]; <<
90 seeds[0] = G4long(534524575674523); <<
91 seeds[1] = G4long(526345623452457); <<
92 CLHEP::HepRandom::setTheSeeds(seeds); <<
93 <<
94 // Construct the default run manager <<
95 char* nthread_c = std::getenv("DICOM_NTHREAD <<
96 <<
97 unsigned nthreads = 4; <<
98 unsigned env_threads = 0; <<
99 <<
100 if (nthread_c) { <<
101 env_threads = unsigned(G4UIcommand::Conver <<
102 } <<
103 if (env_threads > 0) { <<
104 nthreads = env_threads; <<
105 } <<
106 82
107 auto* runManager = G4RunManagerFactory::Crea << 83 new G4tgrMessenger;
108 runManager->SetNumberOfThreads(nthreads); << 84 char* part = getenv( "DICOM_PARTIAL_PARAM" );
>> 85 G4bool bPartial = FALSE;
>> 86 if( part && G4String(part) == "1" ) {
>> 87 bPartial = TRUE;
>> 88 }
>> 89
>> 90 CLHEP::HepRandom::setTheEngine(new CLHEP::RanecuEngine);
>> 91 CLHEP::HepRandom::setTheSeed(24534575684783);
>> 92 long seeds[2];
>> 93 seeds[0] = 534524575674523;
>> 94 seeds[1] = 526345623452457;
>> 95 CLHEP::HepRandom::setTheSeeds(seeds);
>> 96
>> 97 // Construct the default run manager
>> 98 #ifdef G4MULTITHREADED
>> 99 char* nthread_c = getenv("DICOM_NTHREADS");
>> 100
>> 101 unsigned nthreads = 4;
>> 102 unsigned env_threads = 0;
>> 103
>> 104 if(nthread_c) { env_threads = G4UIcommand::ConvertToDouble(nthread_c); }
>> 105 if(env_threads > 0) { nthreads = env_threads; }
>> 106
>> 107 G4MTRunManager* runManager = new G4MTRunManager;
>> 108 runManager->SetNumberOfThreads(nthreads);
109 109
110 DicomDetectorConstruction* theGeometry = 0; << 110 G4cout << "\n\n\tDICOM running in multithreaded mode with " << nthreads
>> 111 << " threads\n\n" << G4endl;
111 112
112 #ifdef G4_DCMTK << 113
113 DicomFileMgr* theFileMgr = 0; <<
114 #else 114 #else
115 DicomHandler* dcmHandler = 0; << 115 G4RunManager* runManager = new G4RunManager;
>> 116 G4cout << "\n\n\tDICOM running in serial mode\n\n" << G4endl;
>> 117
>> 118 #endif
>> 119
>> 120 DicomDetectorConstruction* theGeometry = 0;
>> 121 DicomHandler* dcmHandler = 0;
>> 122
>> 123 if( !bPartial ){
>> 124 // Treatment of DICOM images before creating the G4runManager
>> 125 dcmHandler = new DicomHandler;
>> 126 dcmHandler->CheckFileFormat();
>> 127
>> 128 // Initialisation of physics, geometry, primary particles ...
>> 129 char* nest = getenv( "DICOM_NESTED_PARAM" );
>> 130 if( nest && G4String(nest) == "1" ) {
>> 131 theGeometry = new DicomNestedParamDetectorConstruction();
>> 132 } else {
>> 133 theGeometry = new DicomRegularDetectorConstruction();
>> 134 }
>> 135 } else {
>> 136 theGeometry = new DicomPartialDetectorConstruction();
>> 137 }
>> 138 runManager->SetUserInitialization(theGeometry);
>> 139
>> 140 std::vector<G4String>* MyConstr = new std::vector<G4String>;
>> 141 MyConstr->push_back("G4EmStandardPhysics");
>> 142 G4VModularPhysicsList* phys = new G4GenericPhysicsList(MyConstr);
>> 143 runManager->SetUserInitialization(phys);
>> 144
>> 145 // Set user action classes
>> 146 runManager->SetUserInitialization(new DicomActionInitialization());
>> 147
>> 148 runManager->Initialize();
>> 149
>> 150 new DicomIntersectVolume();
>> 151
>> 152 #ifdef G4VIS_USE
>> 153 // visualisation manager
>> 154 G4VisManager* visManager = new G4VisExecutive;
>> 155 visManager->Initialize();
116 #endif 156 #endif
117 157
118 if (!bPartial) { <<
119 #ifdef G4_DCMTK <<
120 158
121 theFileMgr = DicomFileMgr::GetInstance(); << 159 G4UImanager* UImanager = G4UImanager::GetUIpointer();
122 theFileMgr->Convert("Data.dat"); <<
123 160
124 #else <<
125 // Treatment of DICOM images before creati <<
126 dcmHandler = DicomHandler::Instance(); <<
127 dcmHandler->CheckFileFormat(); <<
128 #endif <<
129 161
130 // Initialisation of physics, geometry, pr << 162 if (argc==1)
131 char* nest = std::getenv("DICOM_NESTED_PAR << 163 {
132 if (nest && G4String(nest) == "1") { << 164 #ifdef G4UI_USE
133 theGeometry = new DicomNestedParamDetect << 165 G4UIExecutive* ui = new G4UIExecutive(argc, argv);
>> 166 #ifdef G4VIS_USE
>> 167 UImanager->ApplyCommand("/control/execute vis.mac");
>> 168 #endif
>> 169 ui->SessionStart();
>> 170 delete ui;
>> 171 #endif
134 } 172 }
135 else { << 173 else
136 theGeometry = new DicomRegularDetectorCo << 174 {
>> 175 G4String command = "/control/execute ";
>> 176 G4String fileName = argv[1];
>> 177 UImanager->ApplyCommand(command+fileName);
137 } 178 }
138 } << 179
139 else { << 180 delete runManager;
140 theGeometry = new DicomPartialDetectorCons << 181
141 } << 182 #ifdef G4VIS_USE
142 runManager->SetUserInitialization(theGeometr << 183 delete visManager;
143 <<
144 // std::vector<G4String>* MyConstr = new <<
145 // MyConstr->push_back("G4EmStandardPhysi <<
146 // G4VModularPhysicsList* phys = new G4Ge <<
147 G4VModularPhysicsList* phys = new Shielding( <<
148 runManager->SetUserInitialization(phys); <<
149 <<
150 // Set user action classes <<
151 runManager->SetUserInitialization(new DicomA <<
152 <<
153 runManager->Initialize(); <<
154 <<
155 new DicomIntersectVolume(); <<
156 <<
157 // visualisation manager <<
158 G4VisManager* visManager = new G4VisExecutiv <<
159 visManager->Initialize(); <<
160 <<
161 G4UImanager* UImanager = G4UImanager::GetUIp <<
162 <<
163 if (ui) { <<
164 UImanager->ApplyCommand("/control/execute <<
165 ui->SessionStart(); <<
166 delete ui; <<
167 } <<
168 else { <<
169 G4String command = "/control/execute "; <<
170 G4String fileName = argv[1]; <<
171 UImanager->ApplyCommand(command + fileName <<
172 } <<
173 <<
174 delete visManager; <<
175 delete runManager; <<
176 <<
177 if (!bPartial) { <<
178 #ifdef G4_DCMTK <<
179 delete theFileMgr; <<
180 #endif 184 #endif
181 } << 185
182 << 186 if( !bPartial ) { delete dcmHandler; }
183 return 0; << 187
>> 188 return 0;
184 } 189 }
>> 190
>> 191
>> 192
185 193