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Geant4/examples/advanced/hadrontherapy/src/HadrontherapySteppingAction.cc

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Differences between /examples/advanced/hadrontherapy/src/HadrontherapySteppingAction.cc (Version 11.3.0) and /examples/advanced/hadrontherapy/src/HadrontherapySteppingAction.cc (Version 9.3.p1)


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 25 //                                                 25 //
 26 // Hadrontherapy advanced example for Geant4   <<  26 // HadrontherapyProtonSteppingAction.cc; 
 27 // See more at: https://twiki.cern.ch/twiki/bi <<  27 // See more at: http://g4advancedexamples.lngs.infn.it/Examples/hadrontherapy
 28                                                    28 
 29 #include "G4SteppingManager.hh"                    29 #include "G4SteppingManager.hh"
 30 #include "G4TrackVector.hh"                        30 #include "G4TrackVector.hh"
 31 #include "HadrontherapySteppingAction.hh"          31 #include "HadrontherapySteppingAction.hh"
 32 #include "G4ios.hh"                                32 #include "G4ios.hh"
 33 #include "G4SteppingManager.hh"                    33 #include "G4SteppingManager.hh"
 34 #include "G4Track.hh"                              34 #include "G4Track.hh"
 35 #include "G4Step.hh"                               35 #include "G4Step.hh"
 36 #include "G4StepPoint.hh"                          36 #include "G4StepPoint.hh"
 37 #include "G4TrackStatus.hh"                        37 #include "G4TrackStatus.hh"
 38 #include "G4TrackVector.hh"                        38 #include "G4TrackVector.hh"
 39 #include "G4ParticleDefinition.hh"                 39 #include "G4ParticleDefinition.hh"
 40 #include "G4ParticleTypes.hh"                      40 #include "G4ParticleTypes.hh"
 41 #include "G4UserEventAction.hh"                <<  41 
 42 #include "G4TransportationManager.hh"          <<  42 #include "HadrontherapyAnalysisManager.hh"
 43 #include "G4VSensitiveDetector.hh"             <<  43 
 44 #include "HadrontherapyRunAction.hh"               44 #include "HadrontherapyRunAction.hh"
 45 #include "HadrontherapyMatrix.hh"              << 
 46 #include "G4SystemOfUnits.hh"                  << 
 47                                                    45 
 48 //////////////////////////////////////////////     46 /////////////////////////////////////////////////////////////////////////////
 49 HadrontherapySteppingAction::HadrontherapyStep     47 HadrontherapySteppingAction::HadrontherapySteppingAction( HadrontherapyRunAction *run)
 50 {                                                  48 {
 51     runAction = run;                           <<  49   runAction = run;
 52 }                                                  50 }
 53                                                    51 
 54 //////////////////////////////////////////////     52 /////////////////////////////////////////////////////////////////////////////
 55 HadrontherapySteppingAction::~HadrontherapySte     53 HadrontherapySteppingAction::~HadrontherapySteppingAction()
 56 {                                                  54 {
 57 }                                                  55 }
 58                                                    56 
 59 //////////////////////////////////////////////     57 /////////////////////////////////////////////////////////////////////////////
 60 void HadrontherapySteppingAction::UserStepping     58 void HadrontherapySteppingAction::UserSteppingAction(const G4Step* aStep)
 61 {                                              <<  59 { 
 62                                                <<  60     if( aStep->GetTrack()->GetVolume()->GetName() == "NewDetectorPhys"){
 63     // The followings are calls to usefuls inf <<  61 #ifdef ANALYSIS_USE
 64     // Please, comment out them if want to use <<  62       G4ParticleDefinition *def = aStep->GetTrack()->GetDefinition();
 65                                                <<  63       G4double secondaryParticleKineticEnergy =  aStep->GetTrack()->GetKineticEnergy();     
 66    // G4Track* theTrack = aStep->GetTrack();   <<  64       G4String particleType = def->GetParticleType(); // particle type = nucleus for d, t, He3, alpha, and heavier nuclei
 67                                                <<  65       G4String particleName = def->GetParticleName(); // e.g. for alpha: the name = "alpha" and type = "nucleus"
 68     G4StepPoint* PreStep = aStep->GetPreStepPo <<  66       if(particleType == "nucleus") {
 69     G4StepPoint* PostStep = aStep->GetPostStep <<  67   G4int A = def->GetBaryonNumber();
 70                                                <<  68   G4double Z = def->GetPDGCharge();
 71     G4TouchableHandle touchPreStep = PreStep-> <<  69   G4double posX = aStep->GetTrack()->GetPosition().x() / cm;
 72     G4TouchableHandle touchPostStep = PostStep <<  70   G4double posY = aStep->GetTrack()->GetPosition().y() / cm;
 73                                                <<  71   G4double posZ = aStep->GetTrack()->GetPosition().z() / cm;
 74     //G4double PreStepX =PreStep->GetPosition( <<  72   G4double energy = secondaryParticleKineticEnergy / A / MeV;
 75     //G4double PreStepY =PreStep->GetPosition( <<  73 
 76     //G4double PreStepZ =PreStep->GetPosition( <<  74   HadrontherapyAnalysisManager* analysisMgr =  HadrontherapyAnalysisManager::getInstance();   
 77                                                <<  75   analysisMgr->fillFragmentTuple(A, Z, energy, posX, posY, posZ);
 78     //G4double PostStepX =PostStep->GetPositio <<  76       } else if(particleName == "proton") {   // proton (hydrogen-1) is a special case
 79     //G4double PostStepY =PostStep->GetPositio <<  77   G4double posX = aStep->GetTrack()->GetPosition().x() / cm ;
 80     //G4double PostStepZ  =PostStep->GetPositi <<  78   G4double posY = aStep->GetTrack()->GetPosition().y() / cm ;
 81                                                <<  79   G4double posZ = aStep->GetTrack()->GetPosition().z() / cm ;
 82     //To get the current volume:               <<  80   G4double energy = secondaryParticleKineticEnergy * MeV;    // Hydrogen-1: A = 1, Z = 1
 83     G4VPhysicalVolume* volumePre = touchPreSte <<  81   HadrontherapyAnalysisManager::getInstance()->fillFragmentTuple(1, 1.0, energy, posX, posY, posZ);
 84     //G4VPhysicalVolume* volumePost =touchPost <<  82       }
 85                                                <<  83 
 86     //To get its name:                         <<  84       G4String secondaryParticleName =  def -> GetParticleName();  
 87     G4String namePre = volumePre->GetName();   <<  85       //G4cout <<"Particle: " << secondaryParticleName << G4endl;
 88                                                <<  86       //G4cout <<"Energy: " << secondaryParticleKineticEnergy << G4endl;
 89                                                <<  87   HadrontherapyAnalysisManager* analysis =  HadrontherapyAnalysisManager::getInstance();   
 90     // positions in the global coordinate syst <<  88   //There is a bunch of stuff recorded with the energy 0, something should perhaps be done about this.
 91     //G4ThreeVector posPreStep  = PreStep->Get <<  89   if(secondaryParticleName == "proton") {
 92     //G4ThreeVector posPostStep = PostStep->Ge <<  90     analysis->hydrogenEnergy(secondaryParticleKineticEnergy / MeV);
 93                                                <<  91   }
 94     //G4int eventNum = G4RunManager::GetRunMan <<  92   if(secondaryParticleName == "deuteron") {
 95                                                <<  93     analysis->hydrogenEnergy((secondaryParticleKineticEnergy/2) / MeV);
 96     //G4double parentID =aStep->GetTrack()->Ge <<  94   }
 97     //G4double trackID =aStep->GetTrack()->Get <<  95   if(secondaryParticleName == "triton") {
 98                                                <<  96     analysis->hydrogenEnergy((secondaryParticleKineticEnergy/3) / MeV);
 99     G4double eKin = aStep -> GetPreStepPoint() <<  97   }
100                                                <<  98   if(secondaryParticleName == "alpha") {
101     G4double PosX = aStep->GetTrack()->GetPosi <<  99     analysis->heliumEnergy((secondaryParticleKineticEnergy/4) / MeV);
102     G4double PosY = aStep->GetTrack()->GetPosi << 100   }
103     G4double PosZ = aStep->GetTrack()->GetPosi << 101   if(secondaryParticleName == "He3"){
104                                                << 102     analysis->heliumEnergy((secondaryParticleKineticEnergy/3) / MeV);   
105     G4String volume=  aStep->GetTrack()->GetVo << 103   }
106     G4Track* theTrack = aStep->GetTrack();     << 104 #endif
107                                                << 105 
108     //G4String material= aStep -> GetTrack() - << 106   aStep->GetTrack()->SetTrackStatus(fKillTrackAndSecondaries);
109     //G4cout << "material   " << material << G << 
110     //G4String volume=  aStep->GetTrack()->Get << 
111     //G4String pvname= pv-> GetName();         << 
112                                                << 
113     G4String particleName = aStep->GetTrack()- << 
114                                                << 
115     G4double momentumX =  aStep->GetTrack()->G << 
116     G4double momentumY =  aStep->GetTrack()->G << 
117     G4double momentumZ =  aStep->GetTrack()->G << 
118                                                << 
119                                                << 
120     G4ParticleDefinition *particleDef = theTra << 
121     G4int pdg = particleDef ->GetPDGEncoding() << 
122                                                << 
123     if(namePre == "VirtualLayer")              << 
124     {                                          << 
125         std::ofstream WriteDataIn("Virtual_Lay << 
126         WriteDataIn                            << 
127                                                << 
128         <<   eKin             <<" " //  1      << 
129         <<   PosX             <<" " //  2      << 
130         <<   PosY             <<" " //  3      << 
131         <<   PosZ             <<" " //  4      << 
132         <<   momentumX        <<" " //  5      << 
133         <<   momentumY        <<" " //  6      << 
134         <<   momentumZ        <<" " //  7      << 
135         <<   pdg                               << 
136         //<<   theTrack         << '\t' << "   << 
137                                                << 
138         <<   G4endl;                           << 
139                                                << 
140         theTrack -> SetTrackStatus(fKillTrackA << 
141                                                << 
142                                                << 
143     }                                             107     }
144                                                << 108 
145                                                << 109   // Electromagnetic and hadronic processes of primary particles in the phantom
146                                                << 110   //setting phantomPhys correctly will break something here fixme
                                                   >> 111   if ((aStep -> GetTrack() -> GetTrackID() == 1) &&
                                                   >> 112     (aStep -> GetTrack() -> GetVolume() -> GetName() == "PhantomPhys") &&
                                                   >> 113     (aStep -> GetPostStepPoint() -> GetProcessDefinedStep() != NULL))
                                                   >> 114       {
                                                   >> 115         G4String process = aStep -> GetPostStepPoint() -> 
                                                   >> 116     GetProcessDefinedStep() -> GetProcessName();
                                                   >> 117  
                                                   >> 118         if ((process == "Transportation") || (process == "StepLimiter")) {;}
                                                   >> 119         else {
                                                   >> 120     if ((process == "msc") || (process == "hLowEIoni") || (process == "hIoni")) 
                                                   >> 121       { 
                                                   >> 122                     runAction -> AddEMProcess();
                                                   >> 123       } 
                                                   >> 124     else  
                                                   >> 125                  {
                                                   >> 126        runAction -> AddHadronicProcess();
                                                   >> 127 
                                                   >> 128                    if ( (process != "LElastic") && (process != "ProtonInelastic") && (process != "hElastic") )
                                                   >> 129          G4cout << "Warning! Unknown proton process: "<< process << G4endl;
                                                   >> 130      }
                                                   >> 131         }         
                                                   >> 132       }
                                                   >> 133 
                                                   >> 134  // Retrieve information about the secondaries originated in the phantom
                                                   >> 135 
                                                   >> 136  G4SteppingManager*  steppingManager = fpSteppingManager;
147                                                   137   
                                                   >> 138   // check if it is alive
                                                   >> 139   //if(theTrack-> GetTrackStatus() == fAlive) { return; }
                                                   >> 140 
                                                   >> 141   // Retrieve the secondary particles
                                                   >> 142   G4TrackVector* fSecondary = steppingManager -> GetfSecondary();
                                                   >> 143      
                                                   >> 144   for(size_t lp1=0;lp1<(*fSecondary).size(); lp1++)
                                                   >> 145     { 
                                                   >> 146       G4String volumeName = (*fSecondary)[lp1] -> GetVolume() -> GetName(); 
                                                   >> 147  
                                                   >> 148       if (volumeName == "phantomPhys")
                                                   >> 149   {
                                                   >> 150 #ifdef ANALYSIS_USE   
                                                   >> 151     G4String secondaryParticleName =  (*fSecondary)[lp1]->GetDefinition() -> GetParticleName();  
                                                   >> 152     G4double secondaryParticleKineticEnergy =  (*fSecondary)[lp1] -> GetKineticEnergy();     
                                                   >> 153 
                                                   >> 154     HadrontherapyAnalysisManager* analysis =  HadrontherapyAnalysisManager::getInstance();   
                                                   >> 155         
                                                   >> 156           if (secondaryParticleName == "e-")
                                                   >> 157       analysis -> electronEnergyDistribution(secondaryParticleKineticEnergy/MeV);
                                                   >> 158           
                                                   >> 159     if (secondaryParticleName == "gamma")
                                                   >> 160       analysis -> gammaEnergyDistribution(secondaryParticleKineticEnergy/MeV);
                                                   >> 161 
                                                   >> 162     if (secondaryParticleName == "deuteron")
                                                   >> 163       analysis -> deuteronEnergyDistribution(secondaryParticleKineticEnergy/MeV);
                                                   >> 164        
                                                   >> 165     if (secondaryParticleName == "triton")
                                                   >> 166       analysis -> tritonEnergyDistribution(secondaryParticleKineticEnergy/MeV);
                                                   >> 167            
                                                   >> 168     if (secondaryParticleName == "alpha")
                                                   >> 169       analysis -> alphaEnergyDistribution(secondaryParticleKineticEnergy/MeV);
                                                   >> 170   
                                                   >> 171     G4double z = (*fSecondary)[lp1]-> GetDynamicParticle() -> GetDefinition() -> GetPDGCharge();
                                                   >> 172     if (z > 0.)
                                                   >> 173             {      
                                                   >> 174         G4int a = (*fSecondary)[lp1]-> GetDynamicParticle() -> GetDefinition() -> GetBaryonNumber();
                                                   >> 175         G4int electronOccupancy = (*fSecondary)[lp1] ->  GetDynamicParticle() -> GetTotalOccupancy(); 
                                                   >> 176         
                                                   >> 177         // If a generic ion is originated in the detector, its baryonic number, PDG charge, 
                                                   >> 178         // total number of electrons in the orbitals are stored in a ntuple 
                                                   >> 179         analysis -> genericIonInformation(a, z, electronOccupancy, secondaryParticleKineticEnergy/MeV);
                                                   >> 180       }
                                                   >> 181 #endif
                                                   >> 182   }
                                                   >> 183     }
148 }                                                 184 }
                                                   >> 185 
                                                   >> 186 
149                                                   187 
150                                                   188 
151                                                   189 
152                                                   190