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1 // 2 // ******************************************************************** 3 // * License and Disclaimer * 4 // * * 5 // * The Geant4 software is copyright of the Copyright Holders of * 6 // * the Geant4 Collaboration. It is provided under the terms and * 7 // * conditions of the Geant4 Software License, included in the file * 8 // * LICENSE and available at http://cern.ch/geant4/license . These * 9 // * include a list of copyright holders. * 10 // * * 11 // * Neither the authors of this software system, nor their employing * 12 // * institutes,nor the agencies providing financial support for this * 13 // * work make any representation or warranty, express or implied, * 14 // * regarding this software system or assume any liability for its * 15 // * use. Please see the license in the file LICENSE and URL above * 16 // * for the full disclaimer and the limitation of liability. * 17 // * * 18 // * This code implementation is the result of the scientific and * 19 // * technical work of the GEANT4 collaboration. * 20 // * By using, copying, modifying or distributing the software (or * 21 // * any work based on the software) you agree to acknowledge its * 22 // * use in resulting scientific publications, and indicate your * 23 // * acceptance of all terms of the Geant4 Software license. * 24 // ******************************************************************** 25 // 26 // 27 #ifndef G4DNAUPDATESYSTEMMODEL_HH 28 #define G4DNAUPDATESYSTEMMODEL_HH 29 #include "G4DNAMesh.hh" 30 #include "G4VUpdateSystemModel.hh" 31 32 class G4MolecularConfiguration; 33 class G4DNAMolecularReactionTable; 34 class G4DNAMolecularReactionData; 35 36 class G4DNAUpdateSystemModel : public G4VUpdateSystemModel 37 { 38 public: 39 using Index = G4VDNAMesh::Index; 40 using MolType = const G4MolecularConfiguration*; 41 using JumpingData = std::pair<MolType, Index>; 42 using ReactionData = const G4DNAMolecularReactionData; 43 44 G4DNAUpdateSystemModel(); 45 ~G4DNAUpdateSystemModel() override = default; 46 void UpdateSystem(const Index& index, const ReactionData& data); 47 void UpdateSystem(const Index& index, const JumpingData& data); 48 void SetMesh(G4DNAMesh*); 49 void SetGlobalTime(const G4double& globalTime) { fGlobalTime = globalTime; } 50 void SetVerbose(G4int verbose) { fVerbose = verbose; } 51 52 private: 53 void KillMolecule(const Index& index, MolType type); 54 void CreateMolecule(const Index& index, MolType); 55 void JumpTo(const Index& index, MolType type); 56 void JumpIn(const Index& index, MolType); 57 G4DNAMesh* fpMesh = nullptr; 58 G4int fVerbose = 0; 59 G4double fGlobalTime = DBL_MAX; 60 }; 61 62 #endif // G4DNAUPDATESYSTEMMODEL_HH 63