| Geant4 Cross Reference |
1 //
2 // ********************************************************************
3 // * License and Disclaimer *
4 // * *
5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided under the terms and *
7 // * conditions of the Geant4 Software License, included in the file *
8 // * LICENSE and available at http://cern.ch/geant4/license . These *
9 // * include a list of copyright holders. *
10 // * *
11 // * Neither the authors of this software system, nor their employing *
12 // * institutes,nor the agencies providing financial support for this *
13 // * work make any representation or warranty, express or implied, *
14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitation of liability. *
17 // * *
18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you agree to acknowledge its *
22 // * use in resulting scientific publications, and indicate your *
23 // * acceptance of all terms of the Geant4 Software license. *
24 // ********************************************************************
25 //
26 //
27 // Author: Mathieu Karamitros
28
29 // The code is developed in the framework of the ESA AO7146
30 //
31 // We would be very happy hearing from you, send us your feedback! :)
32 //
33 // In order for Geant4-DNA to be maintained and still open-source,
34 // article citations are crucial.
35 // If you use Geant4-DNA chemistry and you publish papers about your software,
36 // in addition to the general paper on Geant4-DNA:
37 //
38 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157–178
39 //
40 // we would be very happy if you could please also cite the following
41 // reference papers on chemistry:
42 //
43 // J. Comput. Phys. 274 (2014) 841-882
44 // Prog. Nucl. Sci. Tec. 2 (2011) 503-508
45
46 #pragma once
47
48 #include <G4String.hh>
49 #include <G4VITStepModel.hh>
50
51 class G4DNAMolecularReactionTable;
52 class G4VDNAReactionModel;
53
54 /**
55 * G4DNAMolecularStepByStepModel :
56 * - TimeStepper : G4DNAMolecularEncounterStepper
57 * - ReactionProcess : G4DNAMolecularReaction
58 * Before each step, the next minimum encounter time is calculated for each
59 * pair of molecule. The minimum time step is selected. All the molecules are stepped
60 * within this time step. Then, only the relevant pair of molecules are checked for
61 * reaction.
62 */
63 class G4DNAMolecularStepByStepModel : public G4VITStepModel
64 {
65 public:
66 G4DNAMolecularStepByStepModel(const G4String& name = "DNAMolecularStepByStepModel");
67 G4DNAMolecularStepByStepModel(const G4String& name,
68 std::unique_ptr<G4VITTimeStepComputer> pTimeStepper,
69 std::unique_ptr<G4VITReactionProcess> pReactionProcess);
70 G4DNAMolecularStepByStepModel& operator=(const G4DNAMolecularStepByStepModel&) = delete;
71 G4DNAMolecularStepByStepModel(const G4DNAMolecularStepByStepModel&) = delete;
72 ~G4DNAMolecularStepByStepModel() override;
73
74 void PrintInfo() override;
75 void Initialize() override;
76
77 void SetReactionModel(G4VDNAReactionModel*);
78 G4VDNAReactionModel* GetReactionModel();
79
80 protected:
81 const G4DNAMolecularReactionTable*& fMolecularReactionTable;
82 std::unique_ptr<G4VDNAReactionModel> fpReactionModel;
83 };
84
85