Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/processes/electromagnetic/dna/models/include/G4DNAIndependentReactionTimeStepper.hh

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 //
 27 // 20/2/2019
 28 // Author: HoangTRAN
 29 
 30 #ifndef G4DNAIndependentReactionTimeStepper_hh
 31 #define G4DNAIndependentReactionTimeStepper_hh 1
 32 
 33 #include "G4VITTimeStepComputer.hh"
 34 #include "G4KDTreeResult.hh"
 35 #include "G4IRTUtils.hh"
 36 #include <memory>
 37 #include <set>
 38 #include "G4ITTrackHolder.hh"
 39 #include "G4ITReaction.hh"
 40 #include "G4ReferenceCast.hh"
 41 
 42 class G4VDNAReactionModel;
 43 class G4DNAMolecularReactionTable;
 44 class G4MolecularConfiguration;
 45 class G4Molecule;
 46 class G4ITReactionSet;
 47 class G4ITReactionChange;
 48 class G4VITReactionProcess;
 49 class G4ITTrackHolder;
 50 
 51 class G4DNAIndependentReactionTimeStepper : public G4VITTimeStepComputer
 52 {
 53  public:
 54   G4DNAIndependentReactionTimeStepper();
 55   ~G4DNAIndependentReactionTimeStepper() override = default;
 56   G4DNAIndependentReactionTimeStepper(
 57     const G4DNAIndependentReactionTimeStepper&) = delete;
 58   G4DNAIndependentReactionTimeStepper& operator =(
 59     const G4DNAIndependentReactionTimeStepper&) = delete;
 60 
 61   void Prepare() override;
 62   G4double CalculateStep(const G4Track&, const G4double&) override;
 63   G4double CalculateMinTimeStep(G4double, G4double) override;
 64 
 65   void SetReactionModel(G4VDNAReactionModel*);
 66   G4VDNAReactionModel* GetReactionModel();
 67 
 68   std::unique_ptr<G4ITReactionChange> FindReaction(
 69     G4ITReactionSet* pReactionSet, const G4double& currentStepTime = 0,
 70     const G4double& previousStepTime       = 0,
 71     const G4bool& reachedUserStepTimeLimit = false);
 72   void SetReactionProcess(G4VITReactionProcess* pReactionProcess);
 73   void SetVerbose(G4int);
 74 
 75  private:
 76   void InitializeForNewTrack();
 77   class Utils;
 78   void CheckAndRecordResults(const Utils& utils);
 79 
 80   G4double GetTimeToEncounter(const G4Track& trackA, const G4Track& trackB);
 81 
 82   G4bool fHasAlreadyReachedNullTime = false;
 83   const G4DNAMolecularReactionTable*& fMolecularReactionTable =
 84     reference_cast<const G4DNAMolecularReactionTable*>(fpReactionTable);
 85   G4VDNAReactionModel* fReactionModel     = nullptr;
 86   G4ITTrackHolder* fpTrackContainer       = G4ITTrackHolder::Instance();
 87   G4ITReactionSet* fReactionSet           = G4ITReactionSet::Instance();
 88   G4int fVerbose                          = 0;
 89   G4double fRCutOff                       = G4IRTUtils::GetRCutOff();
 90   G4VITReactionProcess* fpReactionProcess = nullptr;
 91   std::map<G4int, G4ThreeVector> fSampledPositions;
 92   std::set<G4int> fCheckedTracks;
 93 
 94   class Utils
 95   {
 96    public:
 97     Utils(const G4Track& tA, const G4Track& tB);
 98     ~Utils() = default;
 99     const G4Track& fTrackA;
100     const G4Track& fTrackB;
101     const G4Molecule* fpMoleculeA;
102     const G4Molecule* fpMoleculeB;
103   };
104 };
105 #endif
106