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1 // 2 // ******************************************************************** 3 // * License and Disclaimer * 4 // * * 5 // * The Geant4 software is copyright of the Copyright Holders of * 6 // * the Geant4 Collaboration. It is provided under the terms and * 7 // * conditions of the Geant4 Software License, included in the file * 8 // * LICENSE and available at http://cern.ch/geant4/license . These * 9 // * include a list of copyright holders. * 10 // * * 11 // * Neither the authors of this software system, nor their employing * 12 // * institutes,nor the agencies providing financial support for this * 13 // * work make any representation or warranty, express or implied, * 14 // * regarding this software system or assume any liability for its * 15 // * use. Please see the license in the file LICENSE and URL above * 16 // * for the full disclaimer and the limitation of liability. * 17 // * * 18 // * This code implementation is the result of the scientific and * 19 // * technical work of the GEANT4 collaboration. * 20 // * By using, copying, modifying or distributing the software (or * 21 // * any work based on the software) you agree to acknowledge its * 22 // * use in resulting scientific publications, and indicate your * 23 // * acceptance of all terms of the Geant4 Software license. * 24 // ******************************************************************** 25 // 26 // 27 /* 28 * G4DNAIRTMoleculeEncounterStepper.hh 29 * 30 * Created on: Jul 23, 2019 31 * Author: W. G. Shin 32 * J. Ramos-Mendez and B. Faddegon 33 */ 34 35 #pragma once 36 37 #include "G4VITTimeStepComputer.hh" 38 #include "G4KDTreeResult.hh" 39 #include "G4ITReaction.hh" 40 #include "G4ITTrackHolder.hh" 41 42 class G4VDNAReactionModel; 43 class G4DNAMolecularReactionTable; 44 class G4MolecularConfiguration; 45 46 class G4Molecule; 47 48 /** 49 * Given a molecule G4DNAIRTMoleculeEncounterStepper will calculate for its possible reactants 50 * what will be the minimum encounter time and the associated molecules.* 51 * 52 * This model includes dynamical time steps as explained in 53 * "Computer-Aided Stochastic Modeling of the Radiolysis of Liquid Water", 54 * V. Michalik, M. Begusová, E. A. Bigildeev, 55 * Radiation Research, Vol. 149, No. 3 (Mar., 1998), pp. 224-236 56 * 57 */ 58 59 class G4DNAIRTMoleculeEncounterStepper : public G4VITTimeStepComputer 60 { 61 public: 62 G4DNAIRTMoleculeEncounterStepper(); 63 ~G4DNAIRTMoleculeEncounterStepper() override; 64 G4DNAIRTMoleculeEncounterStepper(const G4DNAIRTMoleculeEncounterStepper&) = delete; 65 G4DNAIRTMoleculeEncounterStepper& operator=(const G4DNAIRTMoleculeEncounterStepper&) = delete; 66 67 void Prepare() override; 68 G4double CalculateStep(const G4Track&, const G4double&) override; 69 G4double CalculateMinTimeStep(G4double, G4double) override; 70 71 void SetReactionModel(G4VDNAReactionModel*); 72 G4VDNAReactionModel* GetReactionModel(); 73 74 void SetVerbose(int); 75 // Final time returned when reaction is available in the reaction table = 1 76 // All details = 2 77 78 private: 79 void InitializeForNewTrack(); 80 81 class Utils; 82 void CheckAndRecordResults(const Utils&, 83 #ifdef G4VERBOSE 84 const G4double reactionRange, 85 #endif 86 G4KDTreeResultHandle&); 87 88 G4bool fHasAlreadyReachedNullTime{false}; 89 90 const G4DNAMolecularReactionTable*& fMolecularReactionTable; 91 G4VDNAReactionModel* fReactionModel{nullptr}; 92 G4ITReactionSet* fReactionSet; 93 G4ITTrackHolder* fpTrackContainer; 94 G4int fVerbose{0}; 95 96 class Utils 97 { 98 public: 99 Utils(const G4Track& tA, const G4MolecularConfiguration* mB); 100 ~Utils() = default; 101 102 G4double GetConstant() const 103 { 104 return fConstant; 105 } 106 107 const G4Track& fpTrackA; 108 const G4MolecularConfiguration* fpMoleculeB; 109 const G4Molecule* fpMoleculeA; 110 G4double fDA; 111 G4double fDB; 112 G4double fConstant; 113 }; 114 }; 115