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Geant4/processes/electromagnetic/dna/models/include/G4DNACPA100IonisationModel.hh

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 25 //
 26 // CPA100 ionisation model class for electrons
 27 //
 28 // Based on the work of M. Terrissol and M. C. Bordage
 29 //
 30 // Users are requested to cite the following papers:
 31 // - M. Terrissol, A. Baudre, Radiat. Prot. Dosim. 31 (1990) 175-177
 32 // - M.C. Bordage, J. Bordes, S. Edel, M. Terrissol, X. Franceries,
 33 //   M. Bardies, N. Lampe, S. Incerti, Phys. Med. 32 (2016) 1833-1840
 34 //
 35 // Authors of this class:
 36 // M.C. Bordage, M. Terrissol, S. Edel, J. Bordes, S. Incerti
 37 //
 38 // 15.01.2014: creation
 39 //
 40 // Based on the study by S. Zein et. al. Nucl. Inst. Meth. B 488 (2021) 70-82
 41 // 1/2/2023 : Hoang added modification for DNA cross sections
 42 
 43 #ifndef G4DNACPA100IonisationModel_h
 44 #define G4DNACPA100IonisationModel_h 1
 45 
 46 #include "G4DNACPA100IonisationStructure.hh"
 47 #include "G4DNACrossSectionDataSet.hh"
 48 #include "G4Electron.hh"
 49 #include "G4LogLogInterpolation.hh"
 50 #include "G4NistManager.hh"
 51 #include "G4ParticleChangeForGamma.hh"
 52 #include "G4ProductionCutsTable.hh"
 53 #include "G4VAtomDeexcitation.hh"
 54 #include "G4VDNAModel.hh"
 55 
 56 class G4DNACPA100IonisationModel : public G4VDNAModel
 57 {
 58     using TriDimensionMap =
 59       std::map<std::size_t,
 60                std::map<const G4ParticleDefinition*,
 61                         std::map<G4int, std::map<G4double, std::map<G4double, G4double>>>>>;
 62     using VecMap =
 63       std::map<std::size_t,
 64                std::map<const G4ParticleDefinition*, std::map<G4double, std::vector<G4double>>>>;
 65     using VecMapWithShell =
 66       std::map<std::size_t,
 67                std::map<const G4ParticleDefinition*,
 68                         std::map<G4double, std::map<G4double, std::vector<G4double>>>>>;
 69     using PartKineticInMat =
 70       const std::tuple<std::size_t /*Mat*/, G4double /*Energy*/, G4int /*shell*/>&;
 71 
 72   public:
 73     explicit G4DNACPA100IonisationModel(const G4ParticleDefinition* p = nullptr,
 74                                         const G4String& nam = "DNACPA100IonisationModel");
 75 
 76     ~G4DNACPA100IonisationModel() override = default;
 77 
 78     void Initialise(const G4ParticleDefinition*, const G4DataVector&) override;
 79 
 80     G4double CrossSectionPerVolume(const G4Material* material, const G4ParticleDefinition* p,
 81                                    G4double ekin, G4double emin, G4double emax) override;
 82 
 83     void SampleSecondaries(std::vector<G4DynamicParticle*>*, const G4MaterialCutsCouple*,
 84                            const G4DynamicParticle*, G4double tmin, G4double maxEnergy) override;
 85 
 86     G4double DifferentialCrossSection(PartKineticInMat info, const G4double& energyTransfer);
 87 
 88     // G4double DifferentialCrossSection(const G4double& k,
 89     //                                   const G4double& energyTransfer, const G4int&
 90     //                                   ionizationLevelIndex, const std::size_t& materialID);
 91 
 92     inline void SelectFasterComputation(G4bool input);
 93 
 94     inline void SelectUseDcs(G4bool input);
 95 
 96     inline void SelectStationary(G4bool input);
 97 
 98     G4DNACPA100IonisationModel& operator=(const G4DNACPA100IonisationModel& right) = delete;
 99     G4DNACPA100IonisationModel(const G4DNACPA100IonisationModel&) = delete;
100     void ReadDiffCSFile(const std::size_t& materialID, const G4ParticleDefinition* p,
101                         const G4String& file, const G4double& scaleFactor) override;
102 
103   protected:
104     G4ParticleChangeForGamma* fParticleChangeForGamma = nullptr;
105 
106   private:
107     G4bool statCode = false;
108     G4bool fasterCode = true;
109     G4bool useDcs = false;
110 
111     //  const std::vector<G4double>* fpMolMaterialDensity;
112 
113     // Deexcitation manager to produce fluo photons and e-
114     G4VAtomDeexcitation* fAtomDeexcitation = nullptr;
115 
116     G4bool isInitialised = false;
117     G4int verboseLevel = 0;
118 
119     G4DNACPA100IonisationStructure iStructure;
120 
121     G4double RandomizeEjectedElectronEnergy(PartKineticInMat info);
122 
123     G4double RandomizeEjectedElectronEnergyFromCumulatedDcs(PartKineticInMat info);
124 
125     G4double RandomizeEjectedElectronEnergyFromanalytical(PartKineticInMat info);
126 
127     G4double RandomTransferedEnergy(PartKineticInMat info);
128 
129     void RandomizeEjectedElectronDirection(G4ParticleDefinition* aParticleDefinition,
130                                            G4double incomingParticleEnergy,
131                                            G4double outgoingParticleEnergy, G4double& cosTheta,
132                                            G4double& phi);
133 
134     G4double Interpolate(G4double e1, G4double e2, G4double e, G4double xs1, G4double xs2);
135 
136     G4double QuadInterpolator(G4double e11, G4double e12, G4double e21, G4double e22, G4double x11,
137                               G4double x12, G4double x21, G4double x22, G4double t1, G4double t2,
138                               G4double t, G4double e);
139 
140     TriDimensionMap diffCrossSectionData, fEnergySecondaryData;
141     std::map<std::size_t, std::map<const G4ParticleDefinition*, std::vector<G4double>>>
142       fTMapWithVec;
143     VecMap fEMapWithVector;
144     VecMapWithShell fProbaShellMap;
145 
146     const G4Material* fpGuanine = nullptr;
147     const G4Material* fpG4_WATER = nullptr;
148     const G4Material* fpDeoxyribose = nullptr;
149     const G4Material* fpCytosine = nullptr;
150     const G4Material* fpThymine = nullptr;
151     const G4Material* fpAdenine = nullptr;
152     const G4Material* fpPhosphate = nullptr;
153     const G4ParticleDefinition* fpParticle = nullptr;
154     G4DNACPA100IonisationModel* fpModelData = nullptr;
155 };
156 
157 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
158 
159 inline void G4DNACPA100IonisationModel::SelectFasterComputation(G4bool input)
160 {
161   fasterCode = input;
162 }
163 
164 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
165 
166 inline void G4DNACPA100IonisationModel::SelectUseDcs(G4bool input)
167 {
168   useDcs = input;
169 }
170 
171 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
172 
173 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
174 
175 inline void G4DNACPA100IonisationModel::SelectStationary(G4bool input)
176 {
177   statCode = input;
178 }
179 
180 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
181 
182 #endif
183