Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/wholeNuclearDNA/include/ChromosomeParameterisation.hh

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained using the Geant4-DNA software
 28 // and the DNA geometry given in the Geom_DNA example
 29 // shall cite the following Geant4-DNA collaboration publications:
 30 // [1] NIM B 298 (2013) 47-54
 31 // [2] Med. Phys. 37 (2010) 4692-4708
 32 // The Geant4-DNA web site is available at http://geant4-dna.org
 33 //
 34 /// \file ChromosomeParameterisation.hh
 35 /// \brief Definition of the ChromosomeParameterisation class
 36 
 37 #ifndef ChromosomeParameterisation_H
 38 #define ChromosomeParameterisation_H 1
 39 
 40 #include <G4Box.hh>
 41 #include <G4Ellipsoid.hh>
 42 #include <G4Orb.hh>
 43 #include <G4RotationMatrix.hh>
 44 #include <G4ThreeVector.hh>
 45 #include <G4Torus.hh>
 46 #include <G4Trap.hh>
 47 #include <G4Trd.hh>
 48 #include <G4Tubs.hh>
 49 #include <G4Types.hh>
 50 #include <G4VPVParameterisation.hh>
 51 #include <vector>
 52 
 53 class G4VPhysicalVolume;
 54 class G4Box;
 55 class G4Trd;
 56 class G4Trap;
 57 class G4Cons;
 58 class G4Orb;
 59 class G4Sphere;
 60 class G4Torus;
 61 class G4Para;
 62 class G4Hype;
 63 class G4Tubs;
 64 class G4Polycone;
 65 class G4Polyhedra;
 66 class G4Ellipsoid;
 67 
 68 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 69 
 70 class ChromosomeParameterisation : public G4VPVParameterisation
 71 {
 72   public:
 73     ChromosomeParameterisation(const char* filename);
 74 
 75     virtual ~ChromosomeParameterisation();
 76     inline int GetNumRosettes() { return fPositions.size(); }
 77 
 78     virtual void ComputeTransformation(const G4int copyNo, G4VPhysicalVolume* physVol) const;
 79 
 80     virtual void ComputeDimensions(G4Tubs& rosette, const G4int copyNo,
 81                                    const G4VPhysicalVolume* physVol) const;
 82 
 83   private:
 84     // Dummy declarations to get rid of warnings ...
 85     virtual void ComputeDimensions(G4Box&, const G4int, const G4VPhysicalVolume*) const {}
 86     virtual void ComputeDimensions(G4Trd&, const G4int, const G4VPhysicalVolume*) const {}
 87     virtual void ComputeDimensions(G4Trap&, const G4int, const G4VPhysicalVolume*) const {}
 88     virtual void ComputeDimensions(G4Cons&, const G4int, const G4VPhysicalVolume*) const {}
 89     virtual void ComputeDimensions(G4Sphere&, const G4int, const G4VPhysicalVolume*) const {}
 90     virtual void ComputeDimensions(G4Orb&, const G4int, const G4VPhysicalVolume*) const {}
 91     virtual void ComputeDimensions(G4Torus&, const G4int, const G4VPhysicalVolume*) const {}
 92     virtual void ComputeDimensions(G4Para&, const G4int, const G4VPhysicalVolume*) const {}
 93     virtual void ComputeDimensions(G4Hype&, const G4int, const G4VPhysicalVolume*) const {}
 94     virtual void ComputeDimensions(G4Polycone&, const G4int, const G4VPhysicalVolume*) const {}
 95     virtual void ComputeDimensions(G4Polyhedra&, const G4int, const G4VPhysicalVolume*) const {}
 96     virtual void ComputeDimensions(G4Ellipsoid&, const G4int, const G4VPhysicalVolume*) const {}
 97 
 98     std::vector<G4ThreeVector*> fPositions;
 99     std::vector<G4RotationMatrix*> fRotations;
100 };
101 
102 #endif
103