Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/scavenger/plotG.C

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  1 struct SpeciesInfoAOS
  2 {
  3    SpeciesInfoAOS()
  4    {
  5       fNEvent = 0;
  6       fNumber = 0;
  7       fG = 0.;
  8       fG2 = 0.;
  9    }
 10 
 11    SpeciesInfoAOS(const SpeciesInfoAOS& right) // Species A(B);
 12    {
 13       fNEvent = right.fNEvent;
 14       fNumber = right.fNumber;
 15       fG = right.fG;
 16       fG2 = right.fG2;
 17       fName = right.fName;
 18    }
 19 
 20    SpeciesInfoAOS& operator=(const SpeciesInfoAOS& right) // A = B
 21    {
 22       if(&right == this) return *this;
 23       fNEvent = right.fNEvent;
 24       fNumber = right.fNumber;
 25       fG = right.fG;
 26       fG2 = right.fG2;
 27       fName = right.fName;
 28       return *this;
 29    }
 30 
 31    Int_t fNEvent;
 32    Int_t fNumber;
 33    Double_t fG;
 34    Double_t fG2;
 35    string fName;
 36 };
 37 
 38 //------------------------------------------------------------------------
 39 
 40 struct SpeciesInfoSOA
 41 {
 42    SpeciesInfoSOA()
 43    {
 44       fRelatErr = 0;
 45    }
 46 
 47    SpeciesInfoSOA(const SpeciesInfoSOA& right) :
 48       fG(right.fG),
 49       fGerr(right.fGerr),
 50       fTime(right.fTime),
 51       fRelatErr(right.fRelatErr),
 52       fName(right.fName)
 53    {}
 54 
 55    SpeciesInfoSOA& operator=(const SpeciesInfoSOA& right)
 56    {
 57       if(this == &right) return *this;
 58       fG = right.fG;
 59       fGerr = right.fGerr;
 60       fTime = right.fTime;
 61       fRelatErr = right.fRelatErr;
 62       fName = right.fName;
 63       return *this;
 64    }
 65 
 66    std::vector<Double_t> fG;
 67    std::vector<Double_t> fGerr;
 68    std::vector<Double_t> fTime;
 69    Double_t fRelatErr;
 70    Double_t fMin, fMax;
 71    string fName;
 72 };
 73 
 74 const char* filetypes[] = {
 75    "PostScript", "*.ps",
 76    "Encapsulated PostScript", "*.eps",
 77    "PDF files", "*.pdf",
 78    "Gif files", "*.gif",
 79    "PNG files", "*.png",
 80    "All files", "*",
 81    0, 0
 82 };
 83 
 84 TGTab *gTab = nullptr;
 85 
 86 void Save()
 87 {
 88    TGFileInfo fi;
 89    fi.fFileTypes = filetypes;
 90 
 91    new TGFileDialog(gClient->GetRoot(),gClient->GetRoot(),kFDSave,&fi);
 92    gROOT->GetListOfCanvases()->At(gTab->GetCurrent())->SaveAs(fi.fFilename);
 93 }
 94 
 95 
 96 void plotG()
 97 {
 98    gROOT->SetStyle("Plain");
 99    gStyle->SetPalette(1);
100    gStyle->SetCanvasBorderMode(0);
101    gStyle->SetFrameBorderMode(0);
102    gStyle->SetPadTickX(1);
103    gStyle->SetPadTickY(1);
104 
105    TGMainFrame *main = new TGMainFrame(gClient->GetRoot(), 200, 200);
106    gTab = new TGTab(main, 200, 200);
107    Double_t timeA, sumG, sumG2;
108    Int_t speciesID, number, nEvent;
109    char speciesName[500];
110 
111    TFile* file = new TFile;
112    file = TFile::Open("scorer.root");
113 
114    TTree* tree = (TTree*)file->Get("species");
115    tree->SetBranchAddress("speciesID", &speciesID);
116    tree->SetBranchAddress("number", &number);
117    tree->SetBranchAddress("nEvent", &nEvent);
118    tree->SetBranchAddress("speciesName", &speciesName);
119    tree->SetBranchAddress("time", &timeA);
120    tree->SetBranchAddress("sumG", &sumG);
121    tree->SetBranchAddress("sumG2", &sumG2);
122 
123    Long64_t nentries = tree->GetEntries();
124 
125    if(nentries == 0) {
126       cout << "No entries found in the tree species contained in the file "
127       << file->GetPath() << endl;
128       exit(1);
129    }
130 
131    std::map<int, std::map<double, SpeciesInfoAOS>> speciesTimeInfo;
132 
133    for (Int_t j=0; j < nentries; j++) {
134      tree->GetEntry(j);
135 
136      SpeciesInfoAOS& infoAOS = speciesTimeInfo[speciesID][timeA];
137 
138      infoAOS.fNumber += number;
139      infoAOS.fG += sumG;
140      infoAOS.fG2 += sumG2;
141      infoAOS.fNEvent += nEvent;
142      infoAOS.fName = speciesName;
143    }
144 
145    std::map<Int_t, SpeciesInfoSOA> speciesInfo;
146 
147    auto it_SOA = speciesTimeInfo.begin();
148    auto end_SOA = speciesTimeInfo.end();
149 
150    for (; it_SOA!=end_SOA;++it_SOA) {
151       const Int_t _speciesID = it_SOA->first;
152       SpeciesInfoSOA& info = speciesInfo[_speciesID];
153 
154       auto it2 = it_SOA->second.begin();
155       auto end2 = it_SOA->second.end();
156 
157       info.fName = it2->second.fName;
158       const size_t size2 = it_SOA->second.size();
159       info.fG.resize(size2);
160       info.fGerr.resize(size2);
161       info.fTime.resize(size2);
162 
163       Int_t color = (2+_speciesID)%TColor::GetNumberOfColors();
164       if(color == 5 || color == 10 || color == 0) ++color;
165 
166       for (int i2 = 0 ;it2!=end2;++it2, ++i2) {
167          SpeciesInfoAOS& infoAOS = it2->second;
168 
169          Double_t _SumG2 = infoAOS.fG2;
170          Double_t _MeanG = infoAOS.fG/infoAOS.fNEvent;
171          Double_t _Gerr = (infoAOS.fNEvent > 1) ? sqrt((_SumG2/infoAOS.fNEvent - pow(_MeanG,2))
172                                                     /(infoAOS.fNEvent-1) ) : 0.;
173 
174          info.fG[i2] = _MeanG;
175          info.fGerr[i2] = _Gerr;
176          info.fTime[i2] = it2->first;
177 
178         info.fRelatErr += _Gerr/(_MeanG + 1e-30);
179         if(info.fG[i2] != 0)
180         {
181           std::cout<<info.fTime[i2]<<" "<<info.fG[i2]<<" "<<info.fGerr[i2]<<" "<<info.fName<<std::endl;
182         }
183   }
184 
185       TGraphErrors* gSpecies = new TGraphErrors(info.fG.size(),
186                                                 info.fTime.data(),
187                                                 info.fG.data(),
188                                                 0,
189                                                 info.fGerr.data());
190 
191       TGCompositeFrame *tf = gTab->AddTab(info.fName.c_str());
192       TGCompositeFrame *frame = new TGCompositeFrame(tf, 60, 60,
193                                                      kHorizontalFrame);
194 
195       tf->AddFrame(frame, new TGLayoutHints(kLHintsExpandX|kLHintsExpandY,
196                                             10,10,10,2));
197 
198       TRootEmbeddedCanvas *c1 = new TRootEmbeddedCanvas(info.fName.c_str(),
199                                                         frame, 700, 500);
200       frame->AddFrame(c1, new TGLayoutHints(kLHintsExpandX|kLHintsExpandY,
201                                             10,10,10,2));
202       c1->GetCanvas()->SetLogx();
203 
204       TGHorizontalFrame* hframe = new TGHorizontalFrame(tf, 200, 40);
205 
206       TGTextButton* save = new TGTextButton(hframe, "&Save as ...",
207                                            "Save()");
208       hframe->AddFrame(save, new TGLayoutHints(kLHintsCenterX, 5, 5, 3, 4));
209 
210       TGTextButton *exit = new TGTextButton(hframe, "&Exit ",
211                                             "gApplication->Terminate()");
212       hframe->AddFrame(exit, new TGLayoutHints(kLHintsCenterX, 5, 5, 3, 4));
213 
214       tf->AddFrame(hframe, new TGLayoutHints(kLHintsCenterX, 2, 2, 2, 2));
215 
216       gSpecies->SetTitle(info.fName.c_str());
217       gSpecies->SetMarkerStyle(20+_speciesID);
218       gSpecies->SetMarkerColor(color);
219       gSpecies->SetLineColor(color);
220       gSpecies->GetXaxis()->SetTitle("Time (ns)");
221       gSpecies->GetXaxis()->SetTitleOffset(1.1);
222       gSpecies->GetYaxis()->SetTitle("G value (molecules/100 eV)");
223       gSpecies->GetYaxis()->SetTitleOffset(1.2);
224       gSpecies->Draw("ALP");
225    }
226 
227    main->AddFrame(gTab, new TGLayoutHints(kLHintsBottom | kLHintsExpandX |
228                                           kLHintsExpandY, 2, 2, 5, 1));
229 
230    main->MapSubwindows();
231    main->Resize();   // resize to default size
232    main->MapWindow();
233 
234 }
235