| Geant4 Cross Reference |
1 //
2 // ********************************************************************
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4 // * *
5 // * The Geant4 software is copyright of the Copyright Holders of *
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12 // * institutes,nor the agencies providing financial support for this *
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14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitation of liability. *
17 // * *
18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboration. *
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24 // ********************************************************************
25 //
26 // This example is provided by the Geant4-DNA collaboration
27 // Any report or published results obtained using the Geant4-DNA software
28 // shall cite the following Geant4-DNA collaboration publication:
29 // Med. Phys. 37 (2010) 4692-4708
30 // Delage et al. PDB4DNA: implementation of DNA geometry from the Protein Data
31 // Bank (PDB) description for Geant4-DNA Monte-Carlo
32 // simulations (submitted to Comput. Phys. Commun.)
33 // The Geant4-DNA web site is available at http://geant4-dna.org
34 //
35 //
36 /// \file PDBresidue.cc
37 /// \brief Implementation of the PDBresidue class
38
39 #include "PDBresidue.hh"
40
41 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
42
43 Residue::Residue()
44 : fResName(""),
45 fResSeq(0),
46 fVisible(false),
47 fSelected(false),
48 fCenterX(0),
49 fCenterY(0),
50 fCenterZ(0),
51 fNbAtom(0),
52 fpNext(0),
53 fpFirst(0)
54 {}
55
56 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
57
58 Residue::Residue(const std::string& rN, int rS)
59 {
60 fResName = rN; // Residue name
61 fResSeq = rS; // Residue sequence number
62 fVisible = false;
63 fSelected = false;
64 fCenterX = 0;
65 fCenterY = 0;
66 fCenterZ = 0;
67 fNbAtom = 0;
68 fpNext = 0;
69 fpFirst = 0;
70 }
71
72 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
73
74 Residue* Residue::GetNext()
75 {
76 return fpNext;
77 }
78
79 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
80
81 Atom* Residue::GetFirst()
82 {
83 return fpFirst;
84 }
85
86 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
87
88 int Residue::GetID()
89 {
90 return fResSeq;
91 }
92
93 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
94
95 void Residue::SetNext(Residue* residueNext)
96 {
97 fpNext = residueNext;
98 }
99
100 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
101
102 void Residue::SetFirst(Atom* atomFirst)
103 {
104 fpFirst = atomFirst;
105 }
106