| Geant4 Cross Reference |
1 //
2 // ********************************************************************
3 // * License and Disclaimer *
4 // * *
5 // * The Geant4 software is copyright of the Copyright Holders of *
6 // * the Geant4 Collaboration. It is provided under the terms and *
7 // * conditions of the Geant4 Software License, included in the file *
8 // * LICENSE and available at http://cern.ch/geant4/license . These *
9 // * include a list of copyright holders. *
10 // * *
11 // * Neither the authors of this software system, nor their employing *
12 // * institutes,nor the agencies providing financial support for this *
13 // * work make any representation or warranty, express or implied, *
14 // * regarding this software system or assume any liability for its *
15 // * use. Please see the license in the file LICENSE and URL above *
16 // * for the full disclaimer and the limitation of liability. *
17 // * *
18 // * This code implementation is the result of the scientific and *
19 // * technical work of the GEANT4 collaboration. *
20 // * By using, copying, modifying or distributing the software (or *
21 // * any work based on the software) you agree to acknowledge its *
22 // * use in resulting scientific publications, and indicate your *
23 // * acceptance of all terms of the Geant4 Software license. *
24 // ********************************************************************
25 //
26 // This example is provided by the Geant4-DNA collaboration
27 // Any report or published results obtained using the Geant4-DNA software
28 // shall cite the following Geant4-DNA collaboration publication:
29 // Med. Phys. 37 (2010) 4692-4708
30 // and papers
31 // M. Batmunkh et al. J Radiat Res Appl Sci 8 (2015) 498-507
32 // O. Belov et al. Physica Medica 32 (2016) 1510-1520
33 // The Geant4-DNA web site is available at http://geant4-dna.org
34 //
35 // -------------------------------------------------------------------
36 // November 2016
37 // -------------------------------------------------------------------
38 //
39 /// \file SteppingAction.cc
40 /// \brief Implementation of the SteppingAction class
41
42 #include "SteppingAction.hh"
43
44 #include "PrimaryGeneratorAction.hh"
45 #include "Run.hh"
46 #include "RunAction.hh"
47
48 #include "G4AnalysisManager.hh"
49 #include "G4LogicalVolume.hh"
50 #include "G4LogicalVolumeStore.hh"
51 #include "G4PhysicalVolumeStore.hh"
52 #include "G4RunManager.hh"
53 #include "G4SteppingManager.hh"
54 #include "G4SystemOfUnits.hh"
55 #include "G4VPhysicalVolume.hh"
56 #include "G4VTouchable.hh"
57 #include "G4ios.hh"
58
59 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
60
61 SteppingAction::SteppingAction(RunAction* run) : G4UserSteppingAction(), fRunAction(run) {}
62
63 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
64
65 void SteppingAction::UserSteppingAction(const G4Step* step)
66 {
67 if (step->GetPostStepPoint()->GetProcessDefinedStep()->GetProcessName() != "Transportation") {
68 G4double edepStep = step->GetTotalEnergyDeposit();
69 G4VPhysicalVolume* volumeStep = step->GetPreStepPoint()->GetPhysicalVolume();
70 G4TouchableHandle touchStep = step->GetPreStepPoint()->GetTouchableHandle();
71 G4VPhysicalVolume* volumeMedium = G4PhysicalVolumeStore::GetInstance()->GetVolume("Medium");
72 G4VPhysicalVolume* volumeSlice =
73 G4PhysicalVolumeStore::GetInstance()->GetVolume("BoundingSlice");
74
75 // count processes
76 //
77 const G4StepPoint* endPoint = step->GetPostStepPoint();
78 const G4VProcess* process = endPoint->GetProcessDefinedStep();
79 Run* run = static_cast<Run*>(G4RunManager::GetRunManager()->GetNonConstCurrentRun());
80 run->CountProcesses(process);
81
82 // Edep in all volume
83 if (edepStep > 0.) {
84 fRunAction->AddEdepALL(edepStep);
85
86 // Edep in a target volume (Bounding slice)
87 if (volumeStep == volumeSlice) {
88 fRunAction->AddEdepSlice(edepStep);
89 }
90
91 // Edep in Soma
92 if (volumeStep->GetName() == "Soma") {
93 fRunAction->AddEdepSoma(edepStep);
94 run->AddSomaCompart(touchStep->GetCopyNumber(), edepStep);
95 }
96
97 // Edep in Dendrites
98 if (volumeStep->GetName() == "Dendrites") {
99 fRunAction->AddEdepDend(edepStep);
100 run->AddDendCompart(touchStep->GetCopyNumber(), edepStep);
101 }
102
103 // Edep in Axon
104 if (volumeStep->GetName() == "Axon") {
105 fRunAction->AddEdepAxon(edepStep);
106 run->AddAxonCompart(touchStep->GetCopyNumber(), edepStep);
107 }
108
109 // Edep in whole Neuron
110 if (volumeStep != volumeMedium && volumeStep != volumeSlice) {
111 fRunAction->AddEdepNeuron(edepStep);
112 }
113
114 // Edep outside bounding scice
115 if (volumeStep == volumeMedium) {
116 fRunAction->AddEdepMedium(edepStep);
117 }
118 } // end edep>0
119 }
120 }
121