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Geant4/examples/extended/medical/dna/microprox/src/TrackerSD.cc

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  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collaboration publications:
 29 // Med. Phys. 45 (2018) e722-e739
 30 // Phys. Med. 31 (2015) 861-874
 31 // Med. Phys. 37 (2010) 4692-4708
 32 // Int. J. Model. Simul. Sci. Comput. 1 (2010) 157–178
 33 //
 34 // The Geant4-DNA web site is available at http://geant4-dna.org
 35 //
 36 /// \file TrackerSD.cc
 37 /// \brief Implementation of the TrackerSD class
 38 
 39 #include "TrackerSD.hh"
 40 
 41 #include "G4AnalysisManager.hh"
 42 #include "G4SDManager.hh"
 43 #include "G4SystemOfUnits.hh"
 44 #include "Randomize.hh"
 45 
 46 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 47 
 48 TrackerSD::TrackerSD(const G4String& name, const G4String& hitsCollectionName)
 49   : G4VSensitiveDetector(name), fHitsCollection(NULL)
 50 {
 51   collectionName.insert(hitsCollectionName);
 52 }
 53 
 54 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 55 
 56 TrackerSD::~TrackerSD() {}
 57 
 58 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 59 
 60 void TrackerSD::Initialize(G4HCofThisEvent* hce)
 61 {
 62   // Create hits collection
 63   fHitsCollection = new TrackerHitsCollection(SensitiveDetectorName, collectionName[0]);
 64 
 65   // Add this collection in hce
 66   G4int hcID = G4SDManager::GetSDMpointer()->GetCollectionID(collectionName[0]);
 67 
 68   hce->AddHitsCollection(hcID, fHitsCollection);
 69 }
 70 
 71 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 72 
 73 G4bool TrackerSD::ProcessHits(G4Step* aStep, G4TouchableHistory*)
 74 {
 75   // Energy deposit
 76   G4double edep = aStep->GetTotalEnergyDeposit();
 77 
 78   if (edep == 0.) return false;
 79 
 80   TrackerHit* newHit = new TrackerHit();
 81 
 82   newHit->SetTrackID(aStep->GetTrack()->GetTrackID());
 83   newHit->SetEdep(edep);
 84   newHit->SetPos(aStep->GetPostStepPoint()->GetPosition());
 85 
 86   if (aStep->GetTrack()->GetTrackID() == 1 && aStep->GetTrack()->GetParentID() == 0)
 87     newHit->SetIncidentEnergy(aStep->GetTrack()->GetVertexKineticEnergy());
 88 
 89   fHitsCollection->insert(newHit);
 90 
 91   // Print
 92   // newHit->Print();
 93 
 94   return true;
 95 }
 96 
 97 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 98 void TrackerSD::EndOfEvent(G4HCofThisEvent*)
 99 {
100   G4int nofHits = fHitsCollection->entries();
101 
102   G4double Einc = 0;
103 
104   /*
105   G4cout << G4endl
106   << "-------->Hits Collection: in this event they are "
107   << nofHits
108   << " hits in the target volume " << G4endl;
109   */
110 
111   // PROCESSING OF PROXIMITY FUNCTION t(x)
112 
113   // *************************************
114   // Please select herebelow :
115   // - the minimum value of x radius
116   // - the maximum value of x radius
117   // - the number of steps in radius
118 
119   G4double minRadius = 0.1 * nm;
120 
121   G4double maxRadius = 10000 * nm;
122   G4int nRadiusSteps = 101;
123 
124   //
125 
126   auto analysisManager = G4AnalysisManager::Instance();
127 
128   G4double radius(minRadius);
129   G4double stpRadius(std::pow(maxRadius / radius, 1. / static_cast<G4double>(nRadiusSteps - 1)));
130   G4int step(nRadiusSteps);
131   G4int noRadius(0);
132 
133   // 1) loop on radius
134 
135   while (step > 0) {
136     step--;
137     noRadius = nRadiusSteps - step;
138 
139     // G4cout << "---radius/nm=" << radius/nm  << G4endl;
140 
141     // Computation of t(x)
142 
143     G4double tNum = 0.;
144     G4double tDenom = 0.;
145     G4int nbEdep = 0;
146 
147     // 2) loop on hits
148 
149     for (G4int k = 0; k < nofHits; k++) {
150       G4ThreeVector hitPos = (*fHitsCollection)[k]->GetPos();
151       G4double hitNrj = (*fHitsCollection)[k]->GetEdep();
152 
153       // G4cout << "======> hit position x/nm =" << hitPos.x()/nm << G4endl;
154       // G4cout << "======> hit position y/nm =" << hitPos.y()/nm << G4endl;
155       // G4cout << "======> hit position z/nm =" << hitPos.z()/nm << G4endl;
156 
157       // 3) loop on all other hits located within shell
158 
159       G4double localSum = 0.;
160 
161       for (G4int i = 0; i < nofHits; i++) {
162         if ((*fHitsCollection)[i]->GetIncidentEnergy() > 0)
163           Einc = (*fHitsCollection)[i]->GetIncidentEnergy();
164 
165         G4ThreeVector localPosi = (*fHitsCollection)[i]->GetPos();
166 
167         if (((localPosi.x() - hitPos.x()) * (localPosi.x() - hitPos.x())
168                + (localPosi.y() - hitPos.y()) * (localPosi.y() - hitPos.y())
169                + (localPosi.z() - hitPos.z()) * (localPosi.z() - hitPos.z())
170              < radius * stpRadius * radius * stpRadius)
171             && ((localPosi.x() - hitPos.x()) * (localPosi.x() - hitPos.x())
172                   + (localPosi.y() - hitPos.y()) * (localPosi.y() - hitPos.y())
173                   + (localPosi.z() - hitPos.z()) * (localPosi.z() - hitPos.z())
174                 >= radius * radius))
175 
176         {
177           localSum = localSum + (*fHitsCollection)[i]->GetEdep();
178           nbEdep = nbEdep + 1;
179         }
180       }
181 
182       tNum = tNum + localSum * hitNrj;
183       tDenom = tDenom + hitNrj;
184 
185     }  // loop on hits
186 
187     // fill ntuple including weighting
188     // does not work with ntuple merging...
189 
190     analysisManager->FillNtupleDColumn(0, 0, radius / nm);
191     analysisManager->FillNtupleIColumn(0, 1, noRadius);
192     analysisManager->FillNtupleDColumn(0, 2, nofHits);
193     analysisManager->FillNtupleDColumn(0, 3, nbEdep);
194     analysisManager->FillNtupleDColumn(0, 4, (tNum / tDenom) / eV);
195     analysisManager->FillNtupleDColumn(0, 5, (stpRadius * radius) / nm);
196     analysisManager->FillNtupleDColumn(0, 6, Einc / eV);
197     analysisManager->AddNtupleRow();
198 
199     // G4cout << "---radius/nm=" << radius/nm << G4endl;
200     // G4cout << "----end of radius--- " << radius/nm << G4endl;
201 
202     radius *= stpRadius;
203 
204   }  // loop on radii
205 }
206 
207 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
208