Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/examples/extended/medical/dna/dnadamage2/include/G4EmDNAChemistryForPlasmids.hh

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ] 

  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 /// \file G4EmDNAChemistryForPlasmids.hh
 27 /// \brief Definition of the Chemistry parameters with DNA reactions
 28 /*
 29  * G4EmDNAChemistryForPlasmids.hh
 30  *
 31  *  Created on: Feb 10, 2021
 32  *      Author: J. Naoki D. Kondo
 33  *              W. G. Shin, J. Ramos-Mendez and B. Faddegon
 34  */
 35 
 36 #ifndef DNADAMAGE2_ChemistryForPlasmids_hh
 37 #define DNADAMAGE2_ChemistryForPlasmids_hh 1
 38 
 39 #include "G4UIcmdWithADouble.hh"
 40 #include "G4VPhysicsConstructor.hh"
 41 #include "G4VUserChemistryList.hh"
 42 #include "globals.hh"
 43 
 44 #include <G4UImessenger.hh>
 45 
 46 class G4DNAMolecularReactionTable;
 47 
 48 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 49 
 50 class G4EmDNAChemistryForPlasmids : public G4VUserChemistryList, public G4VPhysicsConstructor
 51 {
 52   public:
 53     G4EmDNAChemistryForPlasmids();
 54     G4EmDNAChemistryForPlasmids(G4double, G4double);
 55     ~G4EmDNAChemistryForPlasmids() override = default;
 56 
 57     void ConstructParticle() override { ConstructMolecule(); }
 58 
 59     void ConstructMolecule() override;
 60     void ConstructProcess() override;
 61 
 62     void ConstructDissociationChannels() override;
 63     void ConstructReactionTable(G4DNAMolecularReactionTable*) override;
 64     void ConstructTimeStepModel(G4DNAMolecularReactionTable*) override;
 65 
 66     void DeclareDMSOAndDNAReactions(G4DNAMolecularReactionTable*);
 67     void DeclareOxygenReactions(G4DNAMolecularReactionTable*);
 68 
 69   private:
 70     G4double fDMSO = 1E-4;
 71     G4double fOxygen = 0.25E-3;
 72 
 73     // G4DNAMolecularReactionTable* fReactionTable = nullptr;
 74 };
 75 
 76 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 77 
 78 #endif
 79