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Geant4/examples/extended/medical/dna/clustering/include/ClusterSBPoints.hh

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  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 // This example is provided by the Geant4-DNA collaboration
 27 // Any report or published results obtained using the Geant4-DNA software
 28 // shall cite the following Geant4-DNA collaboration publication:
 29 // Med. Phys. 37 (2010) 4692-4708
 30 // The Geant4-DNA web site is available at http://geant4-dna.org
 31 //
 32 // Authors: Henri Payno and Yann Perrot
 33 //
 34 //
 35 /// \file ClusterSBPoints.hh
 36 /// \brief Definition of the ClusterSBPoints class
 37 
 38 #ifndef CLUSTER_SB_POINT_HH
 39 #define CLUSTER_SB_POINT_HH
 40 
 41 #include "SBPoint.hh"
 42 
 43 #include <set>
 44 #include <vector>
 45 
 46 /// \brief define a cluster of SB Points
 47 class ClusterSBPoints
 48 {
 49   public:
 50     ClusterSBPoints(std::set<SBPoint*> pPoints);
 51     ~ClusterSBPoints();
 52 
 53     bool IsDSB() const { return fIsDoubleSB; }
 54 
 55     bool IsSSB() const { return !IsDSB(); }
 56 
 57     unsigned int GetSize() const { return fpRegisteredSBPoints.size(); }
 58 
 59     void AddSBPoint(SBPoint* pSBPoint);
 60     G4ThreeVector GetBarycenter() const;
 61 
 62     G4double GetEdep() const;
 63 
 64     void FindAllPointsPossible(std::vector<SBPoint*>* ptToCheck, G4int minPts, G4double minDist);
 65 
 66     /// \brief will set to all store SBPoint they are part of this cluster
 67     void NoticeInternalPts();
 68 
 69     bool HasIn(const SBPoint*, G4double);
 70     bool HasInBarycenter(const SBPoint*, G4double);
 71 
 72     void MergeWith(ClusterSBPoints*);
 73 
 74     std::set<SBPoint*> GetRegistredSBPoints() const { return fpRegisteredSBPoints; }
 75 
 76     void Clear();
 77 
 78   private:
 79     void UpdateDoubleStrand();
 80 
 81     unsigned int fSize;
 82     bool fIsDoubleSB;  // is a double strand break ?
 83 
 84     std::set<SBPoint*> fpRegisteredSBPoints;
 85 };
 86 
 87 #endif  // CLUSTER_SB_POINT_HH
 88