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1 =========================================================
2 Geant4 - dna examples
3 =========================================================
4 README file
5 ----------------------
6
7 This directory contains a set of Geant4-DNA examples.
8
9 Physics
10
11 - dnaphysics
12 The dnaphysics example shows how to simulate track structures in liquid
13 water using the Geant4-DNA physics processes and models.
14
15 - clustering
16 Clustering application for direct damage extraction.
17
18 - icsd
19 This example shows how to use cross section models for DNA materials
20
21 - mfp
22 This example shows how to simulate mean free path in liquid water
23
24 - microdosimetry
25 The microdosimetry example simulates the track of a 5 MeV proton in
26 liquid water.
27 Geant4 standard EM models are used in the World volume while Geant4-DNA
28 models are used in a Target volume, declared as a Region.
29
30 - microprox
31 Computation of proximity functions in liquid water
32
33 - microyz
34 Simulation of microdosimetry spectra
35
36 - range
37 Simulation of ranges.
38
39 - slowing
40 Simulation of slowing down spectra.
41
42 - splitting
43 Use of variance reduction to improve the computational efficiency of
44 ionization.
45
46 - spower
47 Simulation of stopping power.
48
49 - svalue
50 This example shows how to simulate S-values in spheres of liquid water
51 using the Geant4-DNA physics processes and models.
52
53 - wvalue
54 This example shows how to simulate W-values in liquid water
55 using the Geant4-DNA physics processes and models.
56
57 - AuNP
58 Simulation calculates absorbed dose around AuNP
59
60 Chemistry
61
62 - chem1 Simple activation of the chemistry module.
63 - chem2 Usage of TimeStepAction in the chemistry module.
64 - chem3 Activate the full interactivity with the chemistry module.
65 - chem4 Simulation of radiochemical yields with the chemistry module.
66 - chem5 Variation of chem4, using the contructors G4EmDNAPhysics_option8 and
67 G4EmDNAChemistry_option1.
68 - chem6 Scoring of the radiochemical yield G defined as a function of time
69 and LET.
70 - scavenger
71 Activation of the scavenging process in chemistry
72 - UHDR Ultra High Dose Rate
73
74 Geometry and other
75
76 - pdb4dna
77 Usage of the Protein Data Bank (PDB) file format to build geometries.
78
79 - wholeNuclearDNA
80 Geometrical description of a full simplified cell nucleus.
81
82 - dnadamage1
83 Damage simulation on a chromatin fiber.
84
85 - neuron
86 Irradiation of a realistic neuron cell.
87
88 - jetcounter
89 A setup for simulation of a typical experiment with the Jet Counter nanodosemeter
90
91
92 See the README page inside each example for more detail.
93
94
