Geant4 Cross Reference

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Geant4/examples/advanced/dna/moleculardna/src/AnalysisMessenger.cc

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  1 //
  2 // ********************************************************************
  3 // * License and Disclaimer                                           *
  4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.                             *
 10 // *                                                                  *
 11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                                                  *
 18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // ********************************************************************
 25 //
 26 //
 27 #include "AnalysisMessenger.hh"
 28 
 29 #include "AnalysisManager.hh"
 30 
 31 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 32 
 33 AnalysisMessenger::AnalysisMessenger(AnalysisManager* analysisManager)
 34   : fpAnalysisManager(analysisManager),
 35     fpAnalysisDirectory(new G4UIdirectory("/analysisDNA/")),
 36     fpSaveStrands(new G4UIcmdWithABool("/analysisDNA/saveStrands", this)),
 37     fpStrandDirectory(new G4UIcmdWithAString("/analysisDNA/strandDir", this)),
 38     fpFragmentLength(new G4UIcmdWithAnInteger("/analysisDNA/fragmentGap", this)),
 39     fpSaveSingleChain(new G4UIcmdWithAnInteger("/analysisDNA/diagnosticChain", this)),
 40     fpDSBDistance(new G4UIcmdWithAnInteger("/analysisDNA/dsbDistance", this)),
 41     fpTestClassifier(new G4UIcmdWithoutParameter("/analysisDNA/testClassifier", this)),
 42     fpFileName(new G4UIcmdWithAString("/analysisDNA/fileName", this))
 43 {
 44   // world geometry
 45   fpAnalysisDirectory->SetGuidance("App local commands for analysis");
 46 
 47   fpSaveStrands->SetGuidance("Bool to set whether strands ought be saved");
 48   fpSaveStrands->SetGuidance("use /analysisDNA/strandDir to set location");
 49 
 50   fpStrandDirectory->SetGuidance("Directory to save DNA damage fragments");
 51   fpStrandDirectory->SetParameterName("DNA framgents", false);
 52 
 53   fpFragmentLength->SetGuidance("Gap between DNA fragments in base pairs.");
 54   fpFragmentLength->SetGuidance("Set to zero to score placement volumes independently");
 55   fpFragmentLength->SetParameterName("Base Pair gap", false);
 56 
 57   fpSaveSingleChain->SetGuidance("Save the position of hits histos only on one chain");
 58   fpSaveSingleChain->SetParameterName("Chain Index", false);
 59 
 60   fpDSBDistance->SetGuidance("Max separation of DSBs. Must be less than 31.");
 61   fpDSBDistance->SetParameterName("Max. DSB distance.", false);
 62 
 63   fpTestClassifier->SetGuidance("Run unit test for break classification");
 64 
 65   fpFileName->SetGuidance("ROOT output file name");
 66   fpFileName->SetParameterName("ROOT output file name", false);
 67 }
 68 
 69 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 70 
 71 void AnalysisMessenger::SetNewValue(G4UIcommand* command, G4String newValue)
 72 {
 73   if (command == fpStrandDirectory.get()) {
 74     fpAnalysisManager->SetStrandDirectory(newValue);
 75   }
 76   else if (command == fpSaveStrands.get()) {
 77     fpAnalysisManager->SetSaveStrands(G4UIcmdWithABool::GetNewBoolValue(newValue));
 78   }
 79   else if (command == fpFragmentLength.get()) {
 80     fpAnalysisManager->SetFragmentGap(G4UIcmdWithAnInteger::GetNewIntValue(newValue));
 81   }
 82   else if (command == fpSaveSingleChain.get()) {
 83     fpAnalysisManager->SetChainToSave(G4UIcmdWithAnInteger::GetNewIntValue(newValue));
 84   }
 85   else if (command == fpDSBDistance.get()) {
 86     fpAnalysisManager->SetDSBDistance(G4UIcmdWithAnInteger::GetNewIntValue(newValue));
 87   }
 88   else if (command == fpTestClassifier.get()) {
 89     fpAnalysisManager->TestClassification();
 90   }
 91   else if (command == fpFileName.get()) {
 92     fpAnalysisManager->SetFileName(newValue);
 93   }
 94 }
 95 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 96