Geant4 Cross Reference

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Geant4/examples/advanced/dna/moleculardna/include/EllipticalChromosome.hh

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 26 //
 27 /// file: EllipticalChromosome.hh
 28 /// brief: declaration file for a rod-shaped chromosome model.
 29 
 30 #ifndef MOLECULAR_ELLIPTICAL_CHROMOSOME_HH
 31 #define MOLECULAR_ELLIPTICAL_CHROMOSOME_HH
 32 
 33 #include "VirtualChromosome.hh"
 34 
 35 #include "G4RotationMatrix.hh"
 36 #include "G4ThreeVector.hh"
 37 #include "globals.hh"
 38 
 39 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 40 
 41 class EllipticalChromosome : public VirtualChromosome
 42 {
 43   public:
 44     EllipticalChromosome(const G4String&, const G4ThreeVector&, const G4double&, const G4double&,
 45                          const G4double&);
 46 
 47     EllipticalChromosome(const G4String&, const G4ThreeVector&, const G4double&, const G4double&,
 48                          const G4double&, const G4RotationMatrix&);
 49 
 50     ~EllipticalChromosome() override;
 51 
 52     G4bool PointInChromosome(G4ThreeVector const& position) override;
 53 
 54     G4ThreeVector RandomPointInChromosome() override;
 55 
 56     G4String GetShape() override { return fShape; };
 57     static const G4String fShape;
 58 
 59     void Print() override
 60     {
 61       G4cout << "type: " << fShape << G4endl;
 62       G4cout << "semi-x: " << fSemiX << G4endl;
 63       G4cout << "semi-y: " << fSemiY << G4endl;
 64       G4cout << "semi-z: " << fSemiZ << G4endl;
 65       G4cout << "center: " << fCenter << G4endl;
 66       G4cout << "rotation: " << fRotation.getPhi() << " " << fRotation.getTheta() << " "
 67              << fRotation.getPhi() << G4endl;
 68     }
 69 
 70     void SetRotation(const G4RotationMatrix& rot)
 71     {
 72       fRotation = rot;
 73       fInverseRotation = fRotation.inverse();
 74     };
 75 
 76     G4RotationMatrix GetRotation() const { return fRotation; };
 77 
 78     G4ThreeVector GetPosition() const { return fCenter; };
 79 
 80     G4double GetSemiX() const { return fSemiX; };
 81 
 82     G4double GetSemiY() const { return fSemiY; };
 83 
 84     G4double GetSemiZ() const { return fSemiZ; };
 85 
 86   private:
 87     G4ThreeVector fCenter;
 88     G4double fSemiX, fSemiY, fSemiZ;
 89     G4RotationMatrix fRotation, fInverseRotation;
 90 };
 91 
 92 //....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
 93 
 94 #endif  // MOLECULAR_ELLIPTICAL_CHROMOSOME_HH
 95