Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/processes/electromagnetic/dna/molecules/management/src/G4MolecularDissociationTable.cc

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

Diff markup

Differences between /processes/electromagnetic/dna/molecules/management/src/G4MolecularDissociationTable.cc (Version 11.3.0) and /processes/electromagnetic/dna/molecules/management/src/G4MolecularDissociationTable.cc (Version 10.4)


  1 //                                                  1 //
  2 // *******************************************      2 // ********************************************************************
  3 // * License and Disclaimer                         3 // * License and Disclaimer                                           *
  4 // *                                                4 // *                                                                  *
  5 // * The  Geant4 software  is  copyright of th      5 // * The  Geant4 software  is  copyright of the Copyright Holders  of *
  6 // * the Geant4 Collaboration.  It is provided      6 // * the Geant4 Collaboration.  It is provided  under  the terms  and *
  7 // * conditions of the Geant4 Software License      7 // * conditions of the Geant4 Software License,  included in the file *
  8 // * LICENSE and available at  http://cern.ch/      8 // * LICENSE and available at  http://cern.ch/geant4/license .  These *
  9 // * include a list of copyright holders.           9 // * include a list of copyright holders.                             *
 10 // *                                               10 // *                                                                  *
 11 // * Neither the authors of this software syst     11 // * Neither the authors of this software system, nor their employing *
 12 // * institutes,nor the agencies providing fin     12 // * institutes,nor the agencies providing financial support for this *
 13 // * work  make  any representation or  warran     13 // * work  make  any representation or  warranty, express or implied, *
 14 // * regarding  this  software system or assum     14 // * regarding  this  software system or assume any liability for its *
 15 // * use.  Please see the license in the file      15 // * use.  Please see the license in the file  LICENSE  and URL above *
 16 // * for the full disclaimer and the limitatio     16 // * for the full disclaimer and the limitation of liability.         *
 17 // *                                               17 // *                                                                  *
 18 // * This  code  implementation is the result      18 // * This  code  implementation is the result of  the  scientific and *
 19 // * technical work of the GEANT4 collaboratio     19 // * technical work of the GEANT4 collaboration.                      *
 20 // * By using,  copying,  modifying or  distri     20 // * By using,  copying,  modifying or  distributing the software (or *
 21 // * any work based  on the software)  you  ag     21 // * any work based  on the software)  you  agree  to acknowledge its *
 22 // * use  in  resulting  scientific  publicati     22 // * use  in  resulting  scientific  publications,  and indicate your *
 23 // * acceptance of all terms of the Geant4 Sof     23 // * acceptance of all terms of the Geant4 Software license.          *
 24 // *******************************************     24 // ********************************************************************
 25 //                                                 25 //
                                                   >>  26 // $Id: G4MolecularDissociationTable.cc 93883 2015-11-03 08:25:04Z gcosmo $
 26 //                                                 27 //
 27 // WARNING : This class is released as a proto     28 // WARNING : This class is released as a prototype.
 28 // It might strongly evolve or even disapear i     29 // It might strongly evolve or even disapear in the next releases.
 29 //                                                 30 //
 30 // -------------------------------------------     31 // ----------------------------------------------------------------------
 31 //      GEANT 4 class implementation file          32 //      GEANT 4 class implementation file
 32 //                                                 33 //
 33 //      History: first implementation by Alfon     34 //      History: first implementation by Alfonso Mantero 4 Mar 2009
 34 //                                                 35 //
 35 // -------------------------------------------     36 // ----------------------------------------------------------------
 36                                                    37 
 37 #include "G4MolecularDissociationTable.hh"         38 #include "G4MolecularDissociationTable.hh"
 38 #include "G4MolecularDissociationChannel.hh"       39 #include "G4MolecularDissociationChannel.hh"
 39 #include "G4MolecularConfiguration.hh"             40 #include "G4MolecularConfiguration.hh"
 40                                                    41 
 41 using namespace std;                               42 using namespace std;
 42 using namespace G4DNA;                             43 using namespace G4DNA;
 43                                                    44 
 44 //____________________________________________     45 //______________________________________________________________________________
 45                                                    46 
 46 G4MolecularDissociationTable::G4MolecularDisso     47 G4MolecularDissociationTable::G4MolecularDissociationTable()
 47 = default;                                     <<  48 {
                                                   >>  49   ;
                                                   >>  50 }
 48                                                    51 
 49 //____________________________________________     52 //______________________________________________________________________________
 50                                                    53 
 51 G4MolecularDissociationTable::~G4MolecularDiss     54 G4MolecularDissociationTable::~G4MolecularDissociationTable()
 52 {                                                  55 {
 53   auto it_map = fDissociationChannels.begin(); <<  56   ChannelMap::iterator it_map = fDissociationChannels.begin();
 54                                                    57 
 55   for (; it_map != fDissociationChannels.end()     58   for (; it_map != fDissociationChannels.end(); it_map++)
 56   {                                                59   {
 57     vector<const G4MolecularDissociationChanne     60     vector<const G4MolecularDissociationChannel*>& decayChannels = it_map
 58         ->second;                                  61         ->second;
 59     if (!decayChannels.empty())                    62     if (!decayChannels.empty())
 60     {                                              63     {
 61       for (auto & decayChannel : decayChannels <<  64       for (int i = 0; i < (int) decayChannels.size(); i++)
 62       {                                            65       {
 63         if (decayChannel != nullptr)           <<  66         if (decayChannels[i])
 64         {                                          67         {
 65           delete decayChannel;                 <<  68           delete decayChannels[i];
 66           decayChannel = nullptr;              <<  69           decayChannels[i] = 0;
 67         }                                          70         }
 68       }                                            71       }
 69       decayChannels.clear();                       72       decayChannels.clear();
 70     }                                              73     }
 71   }                                                74   }
 72   fDissociationChannels.clear();                   75   fDissociationChannels.clear();
 73 }                                                  76 }
 74                                                    77 
 75 //____________________________________________     78 //______________________________________________________________________________
 76                                                    79 
 77 G4MolecularDissociationTable::                     80 G4MolecularDissociationTable::
 78   G4MolecularDissociationTable(const G4Molecul     81   G4MolecularDissociationTable(const G4MolecularDissociationTable& right)
 79 {                                                  82 {
 80   *this = right;                                   83   *this = right;
 81 }                                                  84 }
 82                                                    85 
 83 //____________________________________________     86 //______________________________________________________________________________
 84                                                    87 
 85 G4MolecularDissociationTable&                      88 G4MolecularDissociationTable&
 86 G4MolecularDissociationTable::operator=(const      89 G4MolecularDissociationTable::operator=(const G4MolecularDissociationTable& right)
 87 {                                                  90 {
 88   if(this == &right) return *this;                 91   if(this == &right) return *this;
 89   fDissociationChannels = right.fDissociationC     92   fDissociationChannels = right.fDissociationChannels;
 90   return *this;                                    93   return *this;
 91 }                                                  94 }
 92                                                    95 
 93 //____________________________________________     96 //______________________________________________________________________________
 94                                                    97 
 95 const vector<const G4MolecularDissociationChan     98 const vector<const G4MolecularDissociationChannel*>*
 96 G4MolecularDissociationTable::                     99 G4MolecularDissociationTable::
 97   GetDecayChannels(const G4MolecularConfigurat    100   GetDecayChannels(const G4MolecularConfiguration* conf) const
 98 {                                                 101 {
 99   auto it_exstates = fDissociationChannels.fin << 102   ChannelMap::const_iterator it_exstates = fDissociationChannels.find(conf);
100   if (it_exstates == fDissociationChannels.end << 103   if (it_exstates == fDissociationChannels.end()) return 0;
101   return &(it_exstates->second);                  104   return &(it_exstates->second);
102 }                                                 105 }
103                                                   106 
104 //____________________________________________    107 //______________________________________________________________________________
105                                                   108 
106 const vector<const G4MolecularDissociationChan    109 const vector<const G4MolecularDissociationChannel*>*
107 G4MolecularDissociationTable::GetDecayChannels    110 G4MolecularDissociationTable::GetDecayChannels(const G4String& exState) const
108 {                                                 111 {
109   for(const auto & fDissociationChannel : fDis << 112   for(ChannelMap::const_iterator it = fDissociationChannels.begin() ;
                                                   >> 113       it!=fDissociationChannels.end() ; ++it
                                                   >> 114       )
110   {                                               115   {
111     if(fDissociationChannel.first->GetLabel()  << 116     if(it->first->GetLabel() == exState) return &(it->second);
112   }                                               117   }
113   return nullptr;                              << 118   return 0;
114 }                                                 119 }
115                                                   120 
116 //____________________________________________    121 //______________________________________________________________________________
117                                                   122 
118 //void G4MolecularDissociationTable::             123 //void G4MolecularDissociationTable::
119 //  AddExcitedState(const G4String& label,        124 //  AddExcitedState(const G4String& label,
120 //                  const G4MolecularConfigura    125 //                  const G4MolecularConfiguration* molConf);
121 //{                                               126 //{
122 //                                                127 //
123 //}                                               128 //}
124                                                   129 
125 //____________________________________________    130 //______________________________________________________________________________
126                                                   131 
127 void G4MolecularDissociationTable::               132 void G4MolecularDissociationTable::
128   AddChannel(const G4MolecularConfiguration* m    133   AddChannel(const G4MolecularConfiguration* molConf,
129              const G4MolecularDissociationChan    134              const G4MolecularDissociationChannel* channel)
130 {                                                 135 {
131   fDissociationChannels[molConf].push_back(cha    136   fDissociationChannels[molConf].push_back(channel);
132 }                                                 137 }
133                                                   138 
134 //____________________________________________    139 //______________________________________________________________________________
135                                                   140 
136 void G4MolecularDissociationTable::CheckDataCo    141 void G4MolecularDissociationTable::CheckDataConsistency() const
137 {                                                 142 {
138   ChannelMap::const_iterator channelsIter;        143   ChannelMap::const_iterator channelsIter;
139                                                   144 
140   for(channelsIter = fDissociationChannels.beg    145   for(channelsIter = fDissociationChannels.begin();
141       channelsIter != fDissociationChannels.en    146       channelsIter != fDissociationChannels.end(); ++channelsIter)
142   {                                               147   {
143                                                   148 
144     const vector<const G4MolecularDissociation    149     const vector<const G4MolecularDissociationChannel*>& decayVect =
145         channelsIter->second;                     150         channelsIter->second;
146     G4double sum = 0;                             151     G4double sum = 0;
147                                                   152 
148     G4double max = decayVect.size();              153     G4double max = decayVect.size();
149                                                   154 
150     for(size_t i = 0; i < max; i++)               155     for(size_t i = 0; i < max; i++)
151     {                                             156     {
152       const G4MolecularDissociationChannel* de    157       const G4MolecularDissociationChannel* decay = decayVect[i];
153       const G4double prob = decay->GetProbabil    158       const G4double prob = decay->GetProbability();
154       sum += prob;                                159       sum += prob;
155     }                                             160     }
156                                                   161 
157     if(sum != 1)                                  162     if(sum != 1)
158     {                                             163     {
159       G4ExceptionDescription errMsg;              164       G4ExceptionDescription errMsg;
160       errMsg << "The probabilities for deecita    165       errMsg << "The probabilities for deecitation of molecular configuration "
161              << channelsIter->first->GetName()    166              << channelsIter->first->GetName()
162              << " with label :" <<  channelsIt    167              << " with label :" <<  channelsIter->first->GetLabel()
163              << " don't sum up to 1";             168              << " don't sum up to 1";
164       G4Exception("G4MolecularDissociationTabl    169       G4Exception("G4MolecularDissociationTable::CheckDataConsistency",
165                   "BRANCHING_RATIOS_CONSISTENC    170                   "BRANCHING_RATIOS_CONSISTENCY",
166                   FatalErrorInArgument,           171                   FatalErrorInArgument,
167                   errMsg);                        172                   errMsg);
168     }                                             173     }
169   }                                               174   }
170 }                                                 175 }
171                                                   176 
172 void G4MolecularDissociationTable::Serialize(s    177 void G4MolecularDissociationTable::Serialize(std::ostream& /*char_traits*/)
173 {                                                 178 {
174   // TODO                                         179   // TODO
175 }                                                 180 }
176                                                   181