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Geant4/processes/electromagnetic/dna/models/src/G4DNAScreenedRutherfordElasticModel.cc

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Differences between /processes/electromagnetic/dna/models/src/G4DNAScreenedRutherfordElasticModel.cc (Version 11.3.0) and /processes/electromagnetic/dna/models/src/G4DNAScreenedRutherfordElasticModel.cc (Version 8.1.p2)


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 27                                                   
 28 #include "G4DNAScreenedRutherfordElasticModel.    
 29 #include "G4PhysicalConstants.hh"                 
 30 #include "G4SystemOfUnits.hh"                     
 31 #include "G4DNAMolecularMaterial.hh"              
 32 #include "G4Exp.hh"                               
 33 #include "G4Log.hh"                               
 34                                                   
 35 //....oooOO0OOooo........oooOO0OOooo........oo    
 36                                                   
 37 using namespace std;                              
 38                                                   
 39 //....oooOO0OOooo........oooOO0OOooo........oo    
 40                                                   
 41 G4DNAScreenedRutherfordElasticModel::             
 42 G4DNAScreenedRutherfordElasticModel(const G4Pa    
 43                                     const G4St    
 44 G4VEmModel(nam)                                   
 45 {                                                 
 46   fpWaterDensity = nullptr;                       
 47                                                   
 48   lowEnergyLimit = 0 * eV;                        
 49   intermediateEnergyLimit = 200 * eV; // Switc    
 50   highEnergyLimit = 1. * MeV;                     
 51                                                   
 52   SetLowEnergyLimit(lowEnergyLimit);              
 53   SetHighEnergyLimit(highEnergyLimit);            
 54                                                   
 55   verboseLevel = 0;                               
 56   // Verbosity scale:                             
 57   // 0 = nothing                                  
 58   // 1 = warning for energy non-conservation      
 59   // 2 = details of energy budget                 
 60   // 3 = calculation of cross sections, file o    
 61   // 4 = entering in methods                      
 62                                                   
 63 #ifdef SR_VERBOSE                                 
 64   if (verboseLevel > 0)                           
 65   {                                               
 66     G4cout << "Screened Rutherford Elastic mod    
 67            << G4endl                              
 68            << "Energy range: "                    
 69            << lowEnergyLimit / eV << " eV - "     
 70            << highEnergyLimit / MeV << " MeV"     
 71            << G4endl;                             
 72   }                                               
 73 #endif                                            
 74   fParticleChangeForGamma = nullptr;              
 75                                                   
 76   // Selection of computation method              
 77   // We do not recommend "true" usage with the    
 78   fasterCode = false;                             
 79 }                                                 
 80                                                   
 81 //....oooOO0OOooo........oooOO0OOooo........oo    
 82                                                   
 83 G4DNAScreenedRutherfordElasticModel::~G4DNAScr    
 84 = default;                                        
 85                                                   
 86 //....oooOO0OOooo........oooOO0OOooo........oo    
 87                                                   
 88 void G4DNAScreenedRutherfordElasticModel::        
 89 Initialise(const G4ParticleDefinition* particl    
 90            const G4DataVector& /*cuts*/)          
 91 {                                                 
 92 #ifdef SR_VERBOSE                                 
 93   if (verboseLevel > 3)                           
 94   {                                               
 95     G4cout << "Calling G4DNAScreenedRutherford    
 96            << G4endl;                             
 97   }                                               
 98 #endif                                            
 99                                                   
100   if(particle->GetParticleName() != "e-")         
101   {                                               
102     G4Exception ("*** WARNING: the G4DNAScreen    
103                  "intented to be used with ano    
104                  "",FatalException,"") ;          
105   }                                               
106                                                   
107   // Energy limits                                
108   if (LowEnergyLimit() < 9*eV)                    
109   {                                               
110     G4Exception("*** WARNING: the G4DNAScreene    
111                 "not validated below 9 eV",       
112                 "",JustWarning,"") ;              
113   }                                               
114                                                   
115   if (HighEnergyLimit() > 1*MeV)                  
116   {                                               
117     G4Exception("*** WARNING: the G4DNAScreene    
118                 "not validated above 1 MeV",      
119                 "",JustWarning,"") ;              
120   }                                               
121                                                   
122   //                                              
123 #ifdef SR_VERBOSE                                 
124   if( verboseLevel>0 )                            
125   {                                               
126     G4cout << "Screened Rutherford elastic mod    
127            << "Energy range: "                    
128            << LowEnergyLimit() / eV << " eV -     
129            << HighEnergyLimit() / MeV << " MeV    
130            << G4endl;                             
131   }                                               
132 #endif                                            
133                                                   
134   if (isInitialised) { return; } // return her    
135                                                   
136   // Initialize water density pointer             
137   fpWaterDensity = G4DNAMolecularMaterial::Ins    
138                   GetNumMolPerVolTableFor(G4Ma    
139                                                   
140   fParticleChangeForGamma = GetParticleChangeF    
141   isInitialised = true;                           
142                                                   
143   // Constants for final state by Brenner & Za    
144   // note: if called after if(isInitialised) n    
145   // the values at every call                     
146                                                   
147   betaCoeff=                                      
148   {                                               
149     7.51525,                                      
150     -0.41912,                                     
151     7.2017E-3,                                    
152     -4.646E-5,                                    
153     1.02897E-7};                                  
154                                                   
155   deltaCoeff=                                     
156   {                                               
157     2.9612,                                       
158     -0.26376,                                     
159     4.307E-3,                                     
160     -2.6895E-5,                                   
161     5.83505E-8};                                  
162                                                   
163   gamma035_10Coeff =                              
164   {                                               
165     -1.7013,                                      
166     -1.48284,                                     
167     0.6331,                                       
168     -0.10911,                                     
169     8.358E-3,                                     
170     -2.388E-4};                                   
171                                                   
172   gamma10_100Coeff =                              
173   {                                               
174     -3.32517,                                     
175     0.10996,                                      
176     -4.5255E-3,                                   
177     5.8372E-5,                                    
178     -2.4659E-7};                                  
179                                                   
180   gamma100_200Coeff =                             
181   {                                               
182     2.4775E-2,                                    
183     -2.96264E-5,                                  
184     -1.20655E-7};                                 
185 }                                                 
186                                                   
187 //....oooOO0OOooo........oooOO0OOooo........oo    
188                                                   
189 G4double G4DNAScreenedRutherfordElasticModel::    
190 CrossSectionPerVolume(const G4Material* materi    
191 #ifdef SR_VERBOSE                                 
192                       const G4ParticleDefiniti    
193 #else                                             
194                       const G4ParticleDefiniti    
195 #endif                                            
196                       G4double ekin,              
197                       G4double,                   
198                       G4double)                   
199 {                                                 
200 #ifdef SR_VERBOSE                                 
201   if (verboseLevel > 3)                           
202   {                                               
203     G4cout << "Calling CrossSectionPerVolume()    
204             "G4DNAScreenedRutherfordElasticMod    
205            << G4endl;                             
206   }                                               
207 #endif                                            
208                                                   
209   // Calculate total cross section for model      
210                                                   
211   G4double sigma=0.;                              
212   G4double waterDensity = (*fpWaterDensity)[ma    
213                                                   
214   if(ekin <= HighEnergyLimit() && ekin >= LowE    
215   {                                               
216     G4double z = 10.;                             
217     G4double n = ScreeningFactor(ekin,z);         
218     G4double crossSection = RutherfordCrossSec    
219     sigma = pi * crossSection / (n * (n + 1.))    
220   }                                               
221                                                   
222 #ifdef SR_VERBOSE                                 
223   if (verboseLevel > 2)                           
224   {                                               
225     G4cout << "_______________________________    
226     G4cout << "=== G4DNAScreenedRutherfordElas    
227            << G4endl;                             
228     G4cout << "=== Kinetic energy(eV)=" << eki    
229            << " particle : " << particleDefini    
230            << G4endl;                             
231     G4cout << "=== Cross section per water mol    
232            << G4endl;                             
233     G4cout << "=== Cross section per water mol    
234            << sigma*waterDensity/(1./cm) << G4    
235     G4cout << "=== G4DNAScreenedRutherfordElas    
236            << G4endl;                             
237   }                                               
238 #endif                                            
239                                                   
240   return sigma*waterDensity;                      
241 }                                                 
242                                                   
243 //....oooOO0OOooo........oooOO0OOooo........oo    
244                                                   
245 G4double G4DNAScreenedRutherfordElasticModel::    
246                                                   
247 {                                                 
248   //                                              
249   //                               e^4            
250   // sigma_Ruth(K) = Z (Z+1) -----------------    
251   //                          (4 pi epsilon_0)    
252   //                                              
253   // Where K is the electron non-relativistic     
254   //                                              
255   // NIM 155, pp. 145-156, 1978                   
256                                                   
257   G4double length = (e_squared * (k + electron    
258       / (4 * pi * epsilon0 * k * (k + 2 * elec    
259   G4double cross = z * (z + 1) * length * leng    
260                                                   
261   return cross;                                   
262 }                                                 
263                                                   
264 //....oooOO0OOooo........oooOO0OOooo........oo    
265                                                   
266 G4double G4DNAScreenedRutherfordElasticModel::    
267                                                   
268 {                                                 
269   //                                              
270   //         alpha_1 + beta_1 ln(K/eV)   const    
271   // n(T) = -------------------------- -------    
272   //              K/(m_e c^2)            2 + K    
273   //                                              
274   // Where K is the electron non-relativistic     
275   //                                              
276   // n(T) > 0 for T < ~ 400 MeV                   
277   //                                              
278   // NIM 155, pp. 145-156, 1978                   
279   // Formulae (2) and (5)                         
280                                                   
281   const G4double alpha_1(1.64);                   
282   const G4double beta_1(-0.0825);                 
283   const G4double constK(1.7E-5);                  
284                                                   
285   G4double numerator = (alpha_1 + beta_1 * G4L    
286                        * std::pow(z, 2. / 3.);    
287                                                   
288   k /= electron_mass_c2;                          
289                                                   
290   G4double denominator = k * (2 + k);             
291                                                   
292   G4double value = 0.;                            
293   if (denominator > 0.) value = numerator / de    
294                                                   
295   return value;                                   
296 }                                                 
297                                                   
298 //....oooOO0OOooo........oooOO0OOooo........oo    
299                                                   
300 void G4DNAScreenedRutherfordElasticModel::        
301 SampleSecondaries(std::vector<G4DynamicParticl    
302                   const G4MaterialCutsCouple*     
303                   const G4DynamicParticle* aDy    
304                   G4double,                       
305                   G4double)                       
306 {                                                 
307 #ifdef SR_VERBOSE                                 
308   if (verboseLevel > 3)                           
309   {                                               
310     G4cout << "Calling SampleSecondaries() of     
311               "G4DNAScreenedRutherfordElasticM    
312            << G4endl;                             
313   }                                               
314 #endif                                            
315                                                   
316   G4double electronEnergy0 = aDynamicElectron-    
317   G4double cosTheta = 0.;                         
318                                                   
319   if (electronEnergy0<intermediateEnergyLimit)    
320   {                                               
321 #ifdef SR_VERBOSE                                 
322     if (verboseLevel > 3)                         
323       {G4cout << "---> Using Brenner & Zaider     
324 #endif                                            
325     cosTheta = BrennerZaiderRandomizeCosTheta(    
326   }                                               
327                                                   
328   if (electronEnergy0>=intermediateEnergyLimit    
329   {                                               
330 #ifdef SR_VERBOSE                                 
331     if (verboseLevel > 3)                         
332       {G4cout << "---> Using Screened Rutherfo    
333 #endif                                            
334     G4double z = 10.;                             
335     cosTheta = ScreenedRutherfordRandomizeCosT    
336   }                                               
337                                                   
338   G4double phi = 2. * pi * G4UniformRand();       
339                                                   
340   G4ThreeVector zVers = aDynamicElectron->GetM    
341   G4ThreeVector xVers = zVers.orthogonal();       
342   G4ThreeVector yVers = zVers.cross(xVers);       
343                                                   
344   G4double xDir = std::sqrt(1. - cosTheta*cosT    
345   G4double yDir = xDir;                           
346   xDir *= std::cos(phi);                          
347   yDir *= std::sin(phi);                          
348                                                   
349   G4ThreeVector zPrimeVers((xDir*xVers + yDir*    
350                                                   
351   fParticleChangeForGamma->ProposeMomentumDire    
352                                                   
353   fParticleChangeForGamma->SetProposedKineticE    
354 }                                                 
355                                                   
356 //....oooOO0OOooo........oooOO0OOooo........oo    
357                                                   
358 G4double G4DNAScreenedRutherfordElasticModel::    
359 BrennerZaiderRandomizeCosTheta(G4double k)        
360 {                                                 
361   //  d sigma_el                         1        
362   // ------------ (K) ~ ----------------------    
363   //   d Omega           (1 + 2 gamma(K) - cos    
364   //                                              
365   // Maximum is < 1/(4 gamma(K)^2) + beta(K)/(    
366   //                                              
367   // Phys. Med. Biol. 29 N.4 (1983) 443-447       
368                                                   
369   // gamma(K), beta(K) and delta(K) are polyno    
370                                                   
371   k /= eV;                                        
372                                                   
373   G4double beta = G4Exp(CalculatePolynomial(k,    
374   G4double delta = G4Exp(CalculatePolynomial(k    
375   G4double gamma;                                 
376                                                   
377   if (k > 100.)                                   
378   {                                               
379     gamma = CalculatePolynomial(k, gamma100_20    
380     // Only in this case it is not the exponen    
381   }                                               
382   else                                            
383   {                                               
384     if (k > 10)                                   
385     {                                             
386       gamma = G4Exp(CalculatePolynomial(k, gam    
387     }                                             
388     else                                          
389     {                                             
390       gamma = G4Exp(CalculatePolynomial(k, gam    
391     }                                             
392   }                                               
393                                                   
394   // ***** Original method                        
395                                                   
396   if (!fasterCode)                                
397   {                                               
398                                                   
399    G4double oneOverMax = 1.                       
400       / (1. / (4. * gamma * gamma) + beta         
401           / ((2. + 2. * delta) * (2. + 2. * de    
402                                                   
403    G4double cosTheta = 0.;                        
404    G4double leftDenominator = 0.;                 
405    G4double rightDenominator = 0.;                
406    G4double fCosTheta = 0.;                       
407                                                   
408    do                                             
409    {                                              
410      cosTheta = 2. * G4UniformRand()- 1.;         
411                                                   
412      leftDenominator = (1. + 2.*gamma - cosThe    
413      rightDenominator = (1. + 2.*delta + cosTh    
414      if ( (leftDenominator * rightDenominator)    
415      {                                            
416        fCosTheta = oneOverMax * (1./(leftDenom    
417                                  + beta/(right    
418      }                                            
419    }                                              
420    while (fCosTheta < G4UniformRand());           
421                                                   
422    return cosTheta;                               
423   }                                               
424                                                   
425   // ***** Alternative method using cumulative    
426                                                   
427   if (fasterCode)                                 
428   {                                               
429                                                   
430    //                                             
431    // modified by Shogo OKADA @ KEK, JP, 2016.    
432    //                                             
433    // An integral of differential cross-sectio    
434    // (integral variable: cos(theta), integral    
435    //                                             
436    //          1.0 + x                beta * (    
437    // I = --------------------- + ------------    
438    //      (a - x) * (a + 1.0)      (b + x) *     
439    //                                             
440    // where a = 1.0 + 2.0 * gamma(K), b = 1.0     
441    //                                             
442    // Then, a cumulative probability (cp) is a    
443    //                                             
444    //  cp       1.0 + x                beta *     
445    // ---- = --------------------- + ---------    
446    //  S      (a - x) * (a + 1.0)      (b + x)    
447    //                                             
448    // where 1/S is the integral of differnetic    
449    //                                             
450    //   1           2.0                     2.    
451    //  --- = ----------------------- + -------    
452    //   S     (a - 1.0) * (a + 1.0)     (b + 1    
453    //                                             
454    // x is calculated from the quadratic equat    
455    //                                             
456    // A * x^2 + B * x + C = 0                     
457    //                                             
458    // where A, B, anc C are coefficients of th    
459    //  A = S * {(b - 1.0) - beta * (a + 1.0)}     
460    //  B = S * {(b - 1.0) * (b + 1.0) + beta *    
461    //  C = S * {b * (b - 1.0) + beta * a * (a     
462    //                                             
463                                                   
464    // sampling cumulative probability             
465    G4double cp = G4UniformRand();                 
466                                                   
467    G4double a = 1.0 + 2.0 * gamma;                
468    G4double b = 1.0 + 2.0 * delta;                
469    G4double a1 = a - 1.0;                         
470    G4double a2 = a + 1.0;                         
471    G4double b1 = b - 1.0;                         
472    G4double b2 = b + 1.0;                         
473    G4double c1 = a - b;                           
474    G4double c2 = a * b;                           
475                                                   
476    G4double S = 2.0 / (a1 * a2) + 2.0 * beta /    
477                                                   
478    // coefficients for the quadratic equation     
479    G4double A = S * (b1 - beta * a2) + cp * a2    
480    G4double B = S * (b1 * b2 + beta * a1 * a2)    
481    G4double C = S * (b * b1 + beta * a * a2) -    
482                                                   
483    // calculate cos(theta)                        
484    return (-1.0 * B + std::sqrt(B * B - 4.0 *     
485                                                   
486    /*                                             
487    G4double cosTheta = -1;                        
488    G4double cumul = 0;                            
489    G4double value = 0;                            
490    G4double leftDenominator = 0.;                 
491    G4double rightDenominator = 0.;                
492                                                   
493    // Number of integration steps in the -1,1     
494    G4int iMax=200;                                
495                                                   
496    G4double random = G4UniformRand();             
497                                                   
498    // Cumulate differential cross section         
499    for (G4int i=0; i<iMax; i++)                   
500    {                                              
501     cosTheta = -1 + i*2./(iMax-1);                
502     leftDenominator = (1. + 2.*gamma - cosThet    
503     rightDenominator = (1. + 2.*delta + cosThe    
504     if ( (leftDenominator * rightDenominator)     
505     {                                             
506       cumul = cumul + (1./(leftDenominator*lef    
507     }                                             
508    }                                              
509                                                   
510    // Select cosTheta                             
511    for (G4int i=0; i<iMax; i++)                   
512    {                                              
513      cosTheta = -1 + i*2./(iMax-1);               
514      leftDenominator = (1. + 2.*gamma - cosThe    
515      rightDenominator = (1. + 2.*delta + cosTh    
516      if (cumul !=0 && (leftDenominator * right    
517       value = value + (1./(leftDenominator*lef    
518      if (random < value) break;                   
519    }                                              
520                                                   
521    return cosTheta;                               
522    */                                             
523   }                                               
524                                                   
525   return 0.;                                      
526 }                                                 
527                                                   
528 //....oooOO0OOooo........oooOO0OOooo........oo    
529                                                   
530 G4double G4DNAScreenedRutherfordElasticModel::    
531 CalculatePolynomial(G4double k,                   
532                     std::vector<G4double>& vec    
533 {                                                 
534   // Sum_{i=0}^{size-1} vector_i k^i              
535   //                                              
536   // Phys. Med. Biol. 29 N.4 (1983) 443-447       
537                                                   
538   G4double result = 0.;                           
539   size_t size = vec.size();                       
540                                                   
541   while (size > 0)                                
542   {                                               
543     size--;                                       
544                                                   
545     result *= k;                                  
546     result += vec[size];                          
547   }                                               
548                                                   
549   return result;                                  
550 }                                                 
551                                                   
552 //....oooOO0OOooo........oooOO0OOooo........oo    
553                                                   
554 G4double G4DNAScreenedRutherfordElasticModel::    
555 ScreenedRutherfordRandomizeCosTheta(G4double k    
556                                     G4double z    
557 {                                                 
558                                                   
559   //  d sigma_el                sigma_Ruth(K)     
560   // ------------ (K) ~ ----------------------    
561   //   d Omega           (1 + 2 n(K) - cos(the    
562   //                                              
563   // We extract cos(theta) distributed as (1 +    
564   //                                              
565   // Maximum is for theta=0: 1/(4 n(K)^2) (Whe    
566   //                                              
567   // Phys. Med. Biol. 45 (2000) 3171-3194         
568                                                   
569   // ***** Original method                        
570                                                   
571   if (!fasterCode)                                
572   {                                               
573                                                   
574    G4double n = ScreeningFactor(k, z);            
575                                                   
576    G4double oneOverMax = (4. * n * n);            
577                                                   
578    G4double cosTheta = 0.;                        
579    G4double fCosTheta;                            
580                                                   
581    do                                             
582    {                                              
583      cosTheta = 2. * G4UniformRand()- 1.;         
584      fCosTheta = (1 + 2.*n - cosTheta);           
585      if (fCosTheta !=0.) fCosTheta = oneOverMa    
586    }                                              
587    while (fCosTheta < G4UniformRand());           
588                                                   
589    return cosTheta;                               
590   }                                               
591                                                   
592   // ***** Alternative method using cumulative    
593                                                   
594                                                   
595    //                                             
596    // modified by Shogo OKADA @ KEK, JP, 2016.    
597    //                                             
598    // The cumulative probability (cp) is calcu    
599    // the differential cross-section fomula wi    
600    //                                             
601    //         n(K) * (1.0 + cos(theta))           
602    //  cp = ---------------------------------     
603    //         1.0 + 2.0 * n(K) - cos(theta)       
604    //                                             
605    // Then, cos(theta) is as follows:             
606    //                                             
607    //               cp * (1.0 + 2.0 * n(K)) -     
608    // cos(theta) = ---------------------------    
609    //                       n(k) + cp             
610    //                                             
611    // where, K is kinetic energy, n(K) is scre    
612    //                                             
613                                                   
614    G4double n = ScreeningFactor(k, z);            
615    G4double cp = G4UniformRand();                 
616    G4double numerator = cp * (1.0 + 2.0 * n) -    
617    G4double denominator = n + cp;                 
618    return numerator / denominator;                
619                                                   
620    /*                                             
621    G4double cosTheta = -1;                        
622    G4double cumul = 0;                            
623    G4double value = 0;                            
624    G4double n = ScreeningFactor(k, z);            
625    G4double fCosTheta;                            
626                                                   
627    // Number of integration steps in the -1,1     
628    G4int iMax=200;                                
629                                                   
630    G4double random = G4UniformRand();             
631                                                   
632    // Cumulate differential cross section         
633    for (G4int i=0; i<iMax; i++)                   
634    {                                              
635      cosTheta = -1 + i*2./(iMax-1);               
636      fCosTheta = (1 + 2.*n - cosTheta);           
637      if (fCosTheta !=0.) cumul = cumul + 1./(f    
638    }                                              
639                                                   
640    // Select cosTheta                             
641    for (G4int i=0; i<iMax; i++)                   
642    {                                              
643      cosTheta = -1 + i*2./(iMax-1);               
644      fCosTheta = (1 + 2.*n - cosTheta);           
645      if (cumul !=0.) value = value + (1./(fCos    
646      if (random < value) break;                   
647    }                                              
648    return cosTheta;                               
649    */                                             
650                                                   
651                                                   
652   //return 0.;                                    
653 }                                                 
654                                                   
655                                                   
656