Geant4 Cross Reference

Cross-Referencing   Geant4
Geant4/processes/electromagnetic/dna/models/src/G4DNARPWBAExcitationModel.cc

Version: [ ReleaseNotes ] [ 1.0 ] [ 1.1 ] [ 2.0 ] [ 3.0 ] [ 3.1 ] [ 3.2 ] [ 4.0 ] [ 4.0.p1 ] [ 4.0.p2 ] [ 4.1 ] [ 4.1.p1 ] [ 5.0 ] [ 5.0.p1 ] [ 5.1 ] [ 5.1.p1 ] [ 5.2 ] [ 5.2.p1 ] [ 5.2.p2 ] [ 6.0 ] [ 6.0.p1 ] [ 6.1 ] [ 6.2 ] [ 6.2.p1 ] [ 6.2.p2 ] [ 7.0 ] [ 7.0.p1 ] [ 7.1 ] [ 7.1.p1 ] [ 8.0 ] [ 8.0.p1 ] [ 8.1 ] [ 8.1.p1 ] [ 8.1.p2 ] [ 8.2 ] [ 8.2.p1 ] [ 8.3 ] [ 8.3.p1 ] [ 8.3.p2 ] [ 9.0 ] [ 9.0.p1 ] [ 9.0.p2 ] [ 9.1 ] [ 9.1.p1 ] [ 9.1.p2 ] [ 9.1.p3 ] [ 9.2 ] [ 9.2.p1 ] [ 9.2.p2 ] [ 9.2.p3 ] [ 9.2.p4 ] [ 9.3 ] [ 9.3.p1 ] [ 9.3.p2 ] [ 9.4 ] [ 9.4.p1 ] [ 9.4.p2 ] [ 9.4.p3 ] [ 9.4.p4 ] [ 9.5 ] [ 9.5.p1 ] [ 9.5.p2 ] [ 9.6 ] [ 9.6.p1 ] [ 9.6.p2 ] [ 9.6.p3 ] [ 9.6.p4 ] [ 10.0 ] [ 10.0.p1 ] [ 10.0.p2 ] [ 10.0.p3 ] [ 10.0.p4 ] [ 10.1 ] [ 10.1.p1 ] [ 10.1.p2 ] [ 10.1.p3 ] [ 10.2 ] [ 10.2.p1 ] [ 10.2.p2 ] [ 10.2.p3 ] [ 10.3 ] [ 10.3.p1 ] [ 10.3.p2 ] [ 10.3.p3 ] [ 10.4 ] [ 10.4.p1 ] [ 10.4.p2 ] [ 10.4.p3 ] [ 10.5 ] [ 10.5.p1 ] [ 10.6 ] [ 10.6.p1 ] [ 10.6.p2 ] [ 10.6.p3 ] [ 10.7 ] [ 10.7.p1 ] [ 10.7.p2 ] [ 10.7.p3 ] [ 10.7.p4 ] [ 11.0 ] [ 11.0.p1 ] [ 11.0.p2 ] [ 11.0.p3, ] [ 11.0.p4 ] [ 11.1 ] [ 11.1.1 ] [ 11.1.2 ] [ 11.1.3 ] [ 11.2 ] [ 11.2.1 ] [ 11.2.2 ] [ 11.3.0 ]

Diff markup

Differences between /processes/electromagnetic/dna/models/src/G4DNARPWBAExcitationModel.cc (Version 11.3.0) and /processes/electromagnetic/dna/models/src/G4DNARPWBAExcitationModel.cc (Version 10.2.p1)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 // Reference:                                     
 27 //    A.D. Dominguez-Munoz, M.I. Gallardo, M.C    
 28 //    Z. Francis, S. Incerti, M.A. Cortes-Gira    
 29 //    Radiat. Phys. Chem. 199 (2022) 110363.      
 30 //                                                
 31 // Class authors:                                 
 32 //    A.D. Dominguez-Munoz                        
 33 //    M.A. Cortes-Giraldo (miancortes -at- us.    
 34 //                                                
 35 // Class creation: 2022-03-03                     
 36 //                                                
 37 //                                                
 38                                                   
 39 #include "G4DNARPWBAExcitationModel.hh"           
 40 #include "G4SystemOfUnits.hh"                     
 41 #include "G4DNAChemistryManager.hh"               
 42 #include "G4DNAMolecularMaterial.hh"              
 43 #include <map>                                    
 44 using namespace std;                              
 45                                                   
 46 //....oooOO0OOooo........oooOO0OOooo........oo    
 47                                                   
 48 G4DNARPWBAExcitationModel::G4DNARPWBAExcitatio    
 49   const G4ParticleDefinition*, const G4String&    
 50   : G4VEmModel(nam)                               
 51 {                                                 
 52   // Verbosity scale:                             
 53   // 0 = nothing                                  
 54   // 1 = warning for energy non-conservation      
 55   // 2 = details of energy budget                 
 56   // 3 = calculation of cross sections, file o    
 57   // 4 = entering in methods                      
 58   if(verboseLevel > 0)                            
 59   {                                               
 60     G4cout << "RPWBA excitation model is const    
 61   }                                               
 62 }                                                 
 63                                                   
 64 //....oooOO0OOooo........oooOO0OOooo........oo    
 65                                                   
 66 G4DNARPWBAExcitationModel::~G4DNARPWBAExcitati    
 67                                                   
 68 //....oooOO0OOooo........oooOO0OOooo........oo    
 69                                                   
 70 void G4DNARPWBAExcitationModel::Initialise(con    
 71                                            con    
 72 {                                                 
 73   if(isInitialised)                               
 74   {                                               
 75     return;                                       
 76   }                                               
 77   if(verboseLevel > 3)                            
 78   {                                               
 79     G4cout << "Calling G4DNARPWBAExcitationMod    
 80   }                                               
 81                                                   
 82   if(fParticleDefinition != nullptr && fPartic    
 83   {                                               
 84     G4Exception("G4DNARPWBAExcitationModel::In    
 85                 FatalException,                   
 86                 "Model already initialized for    
 87   }                                               
 88                                                   
 89   fTableFile  = "dna/sigma_excitation_p_RPWBA"    
 90   fLowEnergy  = 100. * MeV;                       
 91   fHighEnergy = 300. * MeV;                       
 92                                                   
 93   if(LowEnergyLimit() < fLowEnergy || HighEner    
 94   {                                               
 95     G4ExceptionDescription ed;                    
 96     ed << "Model is applicable from "<<fLowEne    
 97     G4Exception("G4DNARPWBAExcitationModel::In    
 98       FatalException, ed);                        
 99   }                                               
100                                                   
101   G4double scaleFactor = 1 * cm * cm;             
102   fTableData = make_unique<G4DNACrossSectionDa    
103                                                   
104   fTableData->LoadData(fTableFile);               
105                                                   
106   if(verboseLevel > 0)                            
107   {                                               
108     G4cout << "RPWBA excitation model is initi    
109            << "Energy range: " << LowEnergyLim    
110            << HighEnergyLimit() / keV << " keV    
111            << particle->GetParticleName() << G    
112   }                                               
113                                                   
114   // Initialize water density pointer             
115   if(G4Material::GetMaterial("G4_WATER") != nu    
116     fpMolWaterDensity =                           
117       G4DNAMolecularMaterial::Instance()->GetN    
118         G4Material::GetMaterial("G4_WATER"));     
119   }else{                                          
120     G4ExceptionDescription exceptionDescriptio    
121     exceptionDescription << "G4_WATER does not    
122     G4Exception("G4DNARPWBAIonisationModel::In    
123                 FatalException, exceptionDescr    
124   }                                               
125   fParticleChangeForGamma = GetParticleChangeF    
126   isInitialised           = true;                 
127 }                                                 
128                                                   
129 //....oooOO0OOooo........oooOO0OOooo........oo    
130                                                   
131 G4double G4DNARPWBAExcitationModel::CrossSecti    
132   const G4Material* material, const G4Particle    
133   G4double ekin, G4double, G4double)              
134 {                                                 
135   if(verboseLevel > 3)                            
136   {                                               
137     G4cout << "Calling CrossSectionPerVolume()    
138            << G4endl;                             
139   }                                               
140                                                   
141   if(fTableData == nullptr)                       
142   {                                               
143     G4ExceptionDescription exceptionDescriptio    
144     exceptionDescription << "No cross section     
145     G4Exception("G4DNARPWBAIonisationModel::Cr    
146                 FatalException, exceptionDescr    
147   }                                               
148                                                   
149   if(particleDefinition != fParticleDefinition    
150     return 0;                                     
151                                                   
152   // Calculate total cross section for model      
153                                                   
154   G4double sigma = 0;                             
155                                                   
156   G4double waterDensity = (*fpMolWaterDensity)    
157                                                   
158   if(ekin >= fLowEnergy && ekin <= fHighEnergy    
159   {                                               
160     sigma = fTableData->FindValue(ekin);          
161   }                                               
162                                                   
163   if(verboseLevel > 2)                            
164   {                                               
165     G4cout << "_______________________________    
166     G4cout << "G4DNARPWBAExcitationModel - XS     
167     G4cout << "Kinetic energy(eV)=" << ekin /     
168            << " particle : " << particleDefini    
169     G4cout << "Cross section per water molecul    
170            << G4endl;                             
171     G4cout << "Cross section per water molecul    
172            << sigma * waterDensity / (1. / cm)    
173     G4cout << "G4DNARPWBAExcitationModel - XS     
174   }                                               
175                                                   
176   return sigma * waterDensity;                    
177 }                                                 
178                                                   
179 //....oooOO0OOooo........oooOO0OOooo........oo    
180                                                   
181 void G4DNARPWBAExcitationModel::SampleSecondar    
182   std::vector<G4DynamicParticle*>* /*fvect*/,     
183   const G4MaterialCutsCouple* /*couple*/,         
184   const G4DynamicParticle* aDynamicParticle, G    
185 {                                                 
186   if(verboseLevel > 3)                            
187   {                                               
188     G4cout << "Calling SampleSecondaries() of     
189            << G4endl;                             
190   }                                               
191                                                   
192   G4double k = aDynamicParticle->GetKineticEne    
193                                                   
194   G4int level               = RandomSelect(k);    
195   G4double excitationEnergy = waterStructure.E    
196   G4double newEnergy        = k - excitationEn    
197                                                   
198   if(newEnergy > 0)                               
199   {                                               
200     fParticleChangeForGamma->ProposeMomentumDi    
201       aDynamicParticle->GetMomentumDirection()    
202                                                   
203     if(!statCode){                                
204       fParticleChangeForGamma->SetProposedKine    
205     }                                             
206     else{                                         
207       fParticleChangeForGamma->SetProposedKine    
208     }                                             
209     fParticleChangeForGamma->ProposeLocalEnerg    
210   }                                               
211                                                   
212   const G4Track* theIncomingTrack = fParticleC    
213   G4DNAChemistryManager::Instance()->CreateWat    
214     eExcitedMolecule, level, theIncomingTrack)    
215 }                                                 
216                                                   
217 //....oooOO0OOooo........oooOO0OOooo........oo    
218                                                   
219 G4double G4DNARPWBAExcitationModel::GetPartial    
220   const G4Material*, G4int level, const G4Part    
221   G4double kineticEnergy)                         
222 {                                                 
223   if(fParticleDefinition != particle)             
224   {                                               
225     G4Exception("G4DNARPWBAExcitationModel::Ge    
226                 "RPWBAParticleType", FatalExce    
227                 "Model initialized for another    
228   }                                               
229                                                   
230   return fTableData->GetComponent(level)->Find    
231 }                                                 
232                                                   
233 //....oooOO0OOooo........oooOO0OOooo........oo    
234                                                   
235 G4int G4DNARPWBAExcitationModel::RandomSelect(    
236 {                                                 
237   G4int level = 0;                                
238                                                   
239   auto  valuesBuffer = new G4double[fTableData    
240   const auto  n = (G4int)fTableData->NumberOfC    
241   G4int i(n);                                     
242   G4double value = 0.;                            
243                                                   
244   while(i > 0)                                    
245   {                                               
246     --i;                                          
247     valuesBuffer[i] = fTableData->GetComponent    
248     value += valuesBuffer[i];                     
249   }                                               
250                                                   
251   value *= G4UniformRand();                       
252   i = n;                                          
253                                                   
254   while(i > 0)                                    
255   {                                               
256     --i;                                          
257                                                   
258     if(valuesBuffer[i] > value)                   
259     {                                             
260       delete[] valuesBuffer;                      
261       return i;                                   
262     }                                             
263     value -= valuesBuffer[i];                     
264   }                                               
265   delete[] valuesBuffer;                          
266                                                   
267   return level;                                   
268 }                                                 
269