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Geant4/processes/electromagnetic/dna/models/src/G4DNAPTBAugerModel.cc

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Diff markup

Differences between /processes/electromagnetic/dna/models/src/G4DNAPTBAugerModel.cc (Version 11.3.0) and /processes/electromagnetic/dna/models/src/G4DNAPTBAugerModel.cc (Version 6.0)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 // Authors: S. Meylan and C. Villagrasa (IRSN,    
 27 // Models come from                               
 28 // M. Bug et al, Rad. Phys and Chem. 130, 459-    
 29 //                                                
 30                                                   
 31 #include "G4DNAPTBAugerModel.hh"                  
 32 #include "G4PhysicalConstants.hh"                 
 33 #include "G4SystemOfUnits.hh"                     
 34 #include "Randomize.hh"                           
 35 #include "G4Electron.hh"                          
 36                                                   
 37 #include "G4Material.hh"                          
 38                                                   
 39 using namespace std;                              
 40                                                   
 41 G4DNAPTBAugerModel::G4DNAPTBAugerModel(const G    
 42 {                                                 
 43     verboseLevel = 0;                             
 44     minElectronEnergy = 0.0;                      
 45     // To inform the user that the Auger model    
 46     G4cout << modelName <<" is constructed" <<    
 47 }                                                 
 48                                                   
 49 G4DNAPTBAugerModel::~G4DNAPTBAugerModel()         
 50 {                                                 
 51     if( verboseLevel>0 ) G4cout << modelName <    
 52 }                                                 
 53                                                   
 54 void G4DNAPTBAugerModel::Initialise()             
 55 {                                                 
 56     verboseLevel = 0;                             
 57                                                   
 58     if( verboseLevel>0 )                          
 59     {                                             
 60         G4cout << "PTB Auger model is initiali    
 61     }                                             
 62                                                   
 63 }                                                 
 64                                                   
 65 //....oooOO0OOooo........oooOO0OOooo........oo    
 66                                                   
 67 void G4DNAPTBAugerModel::ComputeAugerEffect(st    
 68 {                                                 
 69     // Rename material if modified NIST materi    
 70     // This is needed when material is obtaine    
 71     G4String materialName = materialNameIni;      
 72     if(materialName.find("_MODIFIED") != 0u){     
 73         materialName = materialName.substr(0,m    
 74     }                                             
 75                                                   
 76     // check if there is a k-shell ionisation     
 77     G4int atomId(0);                              
 78                                                   
 79     atomId = DetermineIonisedAtom(atomId, mate    
 80                                                   
 81     if(atomId!=0)                                 
 82     {                                             
 83         G4double kineticEnergy = CalculAugerEn    
 84                                                   
 85         if(kineticEnergy<0)                       
 86         {                                         
 87             G4cerr<<"*************************    
 88             G4cerr<<"FatalError. Auger kinetic    
 89             exit(EXIT_FAILURE);                   
 90         }                                         
 91                                                   
 92         if(atomId==1 || atomId==2 || atomId==3    
 93         {                                         
 94             GenerateAugerWithRandomDirection(f    
 95         }                                         
 96         else if(atomId==4)                        
 97         {                                         
 98             GenerateAugerWithRandomDirection(f    
 99             GenerateAugerWithRandomDirection(f    
100         }                                         
101     }                                             
102 }                                                 
103                                                   
104 //....oooOO0OOooo........oooOO0OOooo........oo    
105                                                   
106 G4int G4DNAPTBAugerModel::DetermineIonisedAtom    
107 {                                                 
108     if(materialName=="THF" || materialName=="b    
109         if(bindingEnergy==305.07){                
110             atomId=1; //"carbon";                 
111         }                                         
112         else if(bindingEnergy==557.94){           
113             atomId=2; //"oxygen";                 
114         }                                         
115     }                                             
116     else if(materialName=="PY" || materialName    
117             || materialName=="cytosine_PY" ||     
118             || materialName=="adenine_PU" || m    
119             )                                     
120     {                                             
121         if(bindingEnergy==307.52){                
122             atomId=1; //"carbon";                 
123         }                                         
124         else if(bindingEnergy==423.44){           
125             atomId=4; //"nitrogen";               
126         }                                         
127     }                                             
128     else if(materialName=="TMP"|| materialName    
129         if(bindingEnergy==209.59 || bindingEne    
130             atomId=3; //"carbonTMP";              
131     }                                             
132                                                   
133     return atomId;                                
134 }                                                 
135                                                   
136 //....oooOO0OOooo........oooOO0OOooo........oo    
137                                                   
138 G4double G4DNAPTBAugerModel::CalculAugerEnergy    
139 {                                                 
140     G4double kineticEnergy;                       
141                                                   
142     if(atomId==2) // oxygen                       
143     {                                             
144         kineticEnergy = 495*eV;                   
145     }                                             
146     else                                          
147     {                                             
148         G4double f1, f2, f3, g1, g2, Y;           
149                                                   
150         Y = G4UniformRand();                      
151                                                   
152         if(atomId == 1){ // carbon                
153             f1 = -7.331e-2;                       
154             f2 = -3.306e-5;                       
155             f3 = 2.433e0;                         
156             g1 = 4.838e-1;                        
157             g2 = 3.886e0;                         
158         }                                         
159         else if(atomId == 4){ // nitrogen         
160             f1 = -7.518e-2;                       
161             f2 = 1.178e-4;                        
162             f3 = 2.600e0;                         
163             g1 = 4.639e-1;                        
164             g2 = 3.770e0;                         
165         }                                         
166         else// if(atomId == 3) // carbon_TMP      
167         {                                         
168             f1 = -5.700e-2;                       
169             f2 = 1.200e-4;                        
170             f3 = 2.425e0;                         
171             g1 = 5.200e-1;                        
172             g2 = 2.560e0;                         
173         }                                         
174                                                   
175         kineticEnergy = pow(10, f1*pow( abs( l    
176     }                                             
177                                                   
178     return kineticEnergy;                         
179 }                                                 
180                                                   
181 //....oooOO0OOooo........oooOO0OOooo........oo    
182                                                   
183 void G4DNAPTBAugerModel::SetCutForAugerElectro    
184 {                                                 
185   minElectronEnergy = cut;                        
186 }                                                 
187                                                   
188 //....oooOO0OOooo........oooOO0OOooo........oo    
189                                                   
190 void G4DNAPTBAugerModel::GenerateAugerWithRand    
191 {                                                 
192       // Isotropic angular distribution for th    
193       G4double newcosTh = 1.-2.*G4UniformRand(    
194       G4double  newsinTh = std::sqrt(1.-newcos    
195       G4double newPhi = twopi*G4UniformRand();    
196                                                   
197       G4double xDir =  newsinTh*std::sin(newPh    
198       G4double yDir = newsinTh*std::cos(newPhi    
199       G4double zDir = newcosTh;                   
200                                                   
201       G4ThreeVector ElectronDirection(xDir,yDi    
202                                                   
203       // generation of new particle               
204       auto  dp = new G4DynamicParticle (G4Elec    
205       fvect->push_back(dp);                       
206 }                                                 
207