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Geant4/processes/electromagnetic/dna/models/src/G4DNABornExcitationModel1.cc

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Diff markup

Differences between /processes/electromagnetic/dna/models/src/G4DNABornExcitationModel1.cc (Version 11.3.0) and /processes/electromagnetic/dna/models/src/G4DNABornExcitationModel1.cc (Version 3.1)


  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 //                                                
 27                                                   
 28 #include "G4DNABornExcitationModel1.hh"           
 29 #include "G4SystemOfUnits.hh"                     
 30 #include "G4DNAChemistryManager.hh"               
 31 #include "G4DNAMolecularMaterial.hh"              
 32 #include <map>                                    
 33                                                   
 34 //....oooOO0OOooo........oooOO0OOooo........oo    
 35                                                   
 36 using namespace std;                              
 37                                                   
 38 //....oooOO0OOooo........oooOO0OOooo........oo    
 39                                                   
 40 G4DNABornExcitationModel1::G4DNABornExcitation    
 41                                                   
 42 G4VEmModel(nam)                                   
 43 {                                                 
 44   fpMolWaterDensity = nullptr;                    
 45   fHighEnergy = 0;                                
 46   fLowEnergy = 0;                                 
 47   fParticleDefinition = nullptr;                  
 48                                                   
 49   verboseLevel = 0;                               
 50   // Verbosity scale:                             
 51   // 0 = nothing                                  
 52   // 1 = warning for energy non-conservation      
 53   // 2 = details of energy budget                 
 54   // 3 = calculation of cross sections, file o    
 55   // 4 = entering in methods                      
 56                                                   
 57   if (verboseLevel > 0)                           
 58   {                                               
 59     G4cout << "Born excitation model is constr    
 60   }                                               
 61   fParticleChangeForGamma = nullptr;              
 62                                                   
 63   // Selection of stationary mode                 
 64                                                   
 65   statCode = false;                               
 66 }                                                 
 67                                                   
 68 //....oooOO0OOooo........oooOO0OOooo........oo    
 69                                                   
 70 G4DNABornExcitationModel1::~G4DNABornExcitatio    
 71 {                                                 
 72   // Cross section                                
 73                                                   
 74     delete fTableData;                            
 75 }                                                 
 76                                                   
 77 //....oooOO0OOooo........oooOO0OOooo........oo    
 78                                                   
 79 void G4DNABornExcitationModel1::Initialise(con    
 80                                            con    
 81 {                                                 
 82                                                   
 83   if (verboseLevel > 3)                           
 84   {                                               
 85     G4cout << "Calling G4DNABornExcitationMode    
 86   }                                               
 87                                                   
 88   if(fParticleDefinition != nullptr && fPartic    
 89   {                                               
 90     G4Exception("G4DNABornExcitationModel1::In    
 91         FatalException,"Model already initiali    
 92   }                                               
 93                                                   
 94   fParticleDefinition = particle;                 
 95                                                   
 96   if(particle->GetParticleName() == "e-")         
 97   {                                               
 98     fTableFile = "dna/sigma_excitation_e_born"    
 99     fLowEnergy = 9*eV;                            
100     fHighEnergy = 1*MeV;                          
101   }                                               
102   else if(particle->GetParticleName() == "prot    
103   {                                               
104     fTableFile = "dna/sigma_excitation_p_born"    
105     fLowEnergy = 500. * keV;                      
106     fHighEnergy = 100. * MeV;                     
107   }                                               
108                                                   
109   SetLowEnergyLimit(fLowEnergy);                  
110   SetHighEnergyLimit(fHighEnergy);                
111                                                   
112   G4double scaleFactor = (1.e-22 / 3.343) * m*    
113   fTableData = new G4DNACrossSectionDataSet(ne    
114   fTableData->LoadData(fTableFile);               
115                                                   
116   if( verboseLevel>0 )                            
117   {                                               
118     G4cout << "Born excitation model is initia    
119     << "Energy range: "                           
120     << LowEnergyLimit() / eV << " eV - "          
121     << HighEnergyLimit() / keV << " keV for "     
122     << particle->GetParticleName()                
123     << G4endl;                                    
124   }                                               
125                                                   
126   // Initialize water density pointer             
127   fpMolWaterDensity = G4DNAMolecularMaterial::    
128                                                   
129   if (isInitialised)                              
130   { return;}                                      
131   fParticleChangeForGamma = GetParticleChangeF    
132   isInitialised = true;                           
133 }                                                 
134                                                   
135 //....oooOO0OOooo........oooOO0OOooo........oo    
136                                                   
137 G4double G4DNABornExcitationModel1::CrossSecti    
138                                                   
139                                                   
140                                                   
141                                                   
142 {                                                 
143   if (verboseLevel > 3)                           
144   {                                               
145     G4cout << "Calling CrossSectionPerVolume()    
146         << G4endl;                                
147   }                                               
148                                                   
149   if(particleDefinition != fParticleDefinition    
150                                                   
151   // Calculate total cross section for model      
152                                                   
153   G4double sigma=0;                               
154                                                   
155   G4double waterDensity = (*fpMolWaterDensity)    
156                                                   
157   if (ekin >= fLowEnergy && ekin <= fHighEnerg    
158   {                                               
159     sigma = fTableData->FindValue(ekin);          
160   }                                               
161                                                   
162   if (verboseLevel > 2)                           
163   {                                               
164     G4cout << "_______________________________    
165     G4cout << "G4DNABornExcitationModel1 - XS     
166     G4cout << "Kinetic energy(eV)=" << ekin/eV    
167     G4cout << "Cross section per water molecul    
168     G4cout << "Cross section per water molecul    
169     G4cout << "G4DNABornExcitationModel1 - XS     
170   }                                               
171                                                   
172   return sigma*waterDensity;                      
173 }                                                 
174                                                   
175 //....oooOO0OOooo........oooOO0OOooo........oo    
176                                                   
177 void G4DNABornExcitationModel1::SampleSecondar    
178                                                   
179                                                   
180                                                   
181                                                   
182 {                                                 
183                                                   
184   if (verboseLevel > 3)                           
185   {                                               
186     G4cout << "Calling SampleSecondaries() of     
187         << G4endl;                                
188   }                                               
189                                                   
190   G4double k = aDynamicParticle->GetKineticEne    
191                                                   
192   G4int level = RandomSelect(k);                  
193   G4double excitationEnergy = waterStructure.E    
194   G4double newEnergy = k - excitationEnergy;      
195                                                   
196   if (newEnergy > 0)                              
197   {                                               
198     fParticleChangeForGamma->ProposeMomentumDi    
199                                                   
200     if (!statCode) fParticleChangeForGamma->Se    
201     else fParticleChangeForGamma->SetProposedK    
202                                                   
203     fParticleChangeForGamma->ProposeLocalEnerg    
204   }                                               
205                                                   
206   const G4Track * theIncomingTrack = fParticle    
207   G4DNAChemistryManager::Instance()->CreateWat    
208       level,                                      
209       theIncomingTrack);                          
210 }                                                 
211                                                   
212 //....oooOO0OOooo........oooOO0OOooo........oo    
213                                                   
214 G4double G4DNABornExcitationModel1::GetPartial    
215                                                   
216                                                   
217                                                   
218 {                                                 
219   if (fParticleDefinition != particle)            
220   {                                               
221     G4Exception("G4DNABornExcitationModel1::Ge    
222                 "bornParticleType",               
223                 FatalException,                   
224                 "Model initialized for another    
225   }                                               
226                                                   
227   return fTableData->GetComponent(level)->Find    
228 }                                                 
229                                                   
230 //....oooOO0OOooo........oooOO0OOooo........oo    
231                                                   
232 G4int G4DNABornExcitationModel1::RandomSelect(    
233 {                                                 
234   G4int level = 0;                                
235                                                   
236   auto  valuesBuffer = new G4double[fTableData    
237   const auto  n = (G4int)fTableData->NumberOfC    
238   G4int i(n);                                     
239   G4double value = 0.;                            
240                                                   
241   while (i > 0)                                   
242   {                                               
243     i--;                                          
244     valuesBuffer[i] = fTableData->GetComponent    
245     value += valuesBuffer[i];                     
246   }                                               
247                                                   
248   value *= G4UniformRand();                       
249   i = n;                                          
250                                                   
251   while (i > 0)                                   
252   {                                               
253     i--;                                          
254                                                   
255     if (valuesBuffer[i] > value)                  
256     {                                             
257       delete[] valuesBuffer;                      
258       return i;                                   
259     }                                             
260     value -= valuesBuffer[i];                     
261   }                                               
262                                                   
263                                                   
264     delete[] valuesBuffer;                        
265                                                   
266   return level;                                   
267 }                                                 
268                                                   
269