Geant4 Cross Reference

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Geant4/processes/electromagnetic/dna/models/src/G4ChemEquilibrium.cc

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Diff markup

Differences between /processes/electromagnetic/dna/models/src/G4ChemEquilibrium.cc (Version 11.3.0) and /processes/electromagnetic/dna/models/src/G4ChemEquilibrium.cc (Version ReleaseNotes)


** Warning: Cannot open xref database.

  1 //                                                  1 
  2 // *******************************************    
  3 // * License and Disclaimer                       
  4 // *                                              
  5 // * The  Geant4 software  is  copyright of th    
  6 // * the Geant4 Collaboration.  It is provided    
  7 // * conditions of the Geant4 Software License    
  8 // * LICENSE and available at  http://cern.ch/    
  9 // * include a list of copyright holders.         
 10 // *                                              
 11 // * Neither the authors of this software syst    
 12 // * institutes,nor the agencies providing fin    
 13 // * work  make  any representation or  warran    
 14 // * regarding  this  software system or assum    
 15 // * use.  Please see the license in the file     
 16 // * for the full disclaimer and the limitatio    
 17 // *                                              
 18 // * This  code  implementation is the result     
 19 // * technical work of the GEANT4 collaboratio    
 20 // * By using,  copying,  modifying or  distri    
 21 // * any work based  on the software)  you  ag    
 22 // * use  in  resulting  scientific  publicati    
 23 // * acceptance of all terms of the Geant4 Sof    
 24 // *******************************************    
 25 //                                                
 26 //                                                
 27 // Created by ngoc hoang tran on 03/08/2023.      
 28 //                                                
 29                                                   
 30 #include "G4ChemEquilibrium.hh"                   
 31 #include "G4DNAMolecularReactionTable.hh"         
 32                                                   
 33 G4ChemEquilibrium::G4ChemEquilibrium(const G4i    
 34   : fEquilibriumDuration(time), fRectionType(t    
 35 {}                                                
 36                                                   
 37 void G4ChemEquilibrium::Initialize()              
 38 {                                                 
 39   MolType H2O =                                   
 40     G4MoleculeTable::Instance()->GetConfigurat    
 41   MolType H3OpB =                                 
 42     G4MoleculeTable::Instance()->GetConfigurat    
 43   MolType OHmB =                                  
 44     G4MoleculeTable::Instance()->GetConfigurat    
 45   const auto& reactionList = G4DNAMolecularRea    
 46 GetVectorOfReactionData();                        
 47   for(const auto& it : reactionList)              
 48   {                                               
 49     if(it->GetReactionType()==fRectionType)       
 50     {                                             
 51       if(it->GetReactant1() != H2O                
 52           && it->GetReactant1() != H3OpB          
 53           && it->GetReactant1() != OHmB)          
 54       {                                           
 55         fReactant1 = it->GetReactant1();          
 56         fReactantB1 = it->GetReactant2();         
 57       }else                                       
 58       {                                           
 59         fReactant1 = it->GetReactant2();          
 60         fReactantB1 = it->GetReactant1();         
 61       }                                           
 62       for(const auto& itt : *(it->GetProducts(    
 63       {                                           
 64         if(itt != H3OpB                           
 65             && itt != OHmB)                       
 66         {                                         
 67           fReactant2 = itt;                       
 68         }else                                     
 69         {                                         
 70           fReactantB2 = itt;                      
 71         }                                         
 72       }                                           
 73       if(fVerbose > 1) {                          
 74         G4cout << "Equilibrium processes(ID) "    
 75                << " <=> " << fReactant2->GetNa    
 76                << " Time to Equilibrium : " <<    
 77                << " Initial status : " << fAdd    
 78       }                                           
 79       break ;                                     
 80     }                                             
 81   }                                               
 82 }                                                 
 83                                                   
 84 void G4ChemEquilibrium::PrintInfo() const         
 85 {                                                 
 86   G4cout<<"Equilibrium reactions : "<<fReactan    
 87          <<" + "<<fReactantB1->GetName()          
 88          <<" <=> "<<fReactant2->GetName()         
 89          <<" + "<<fReactantB2->GetName()          
 90          <<"  Status : "<<fAddEquilibrium         
 91          <<" from "<<G4BestUnit(fEquilibriumTi    
 92          <<G4BestUnit(fEquilibriumTime + fEqui    
 93 }                                                 
 94                                                   
 95                                                   
 96 void G4ChemEquilibrium::SetEquilibrium(Reactio    
 97 {                                                 
 98   if(pReaction->GetReactionType() != fRectionT    
 99   {                                               
100     std::vector<MolType> molVector;               
101     molVector.push_back(pReaction->GetReactant    
102     molVector.push_back(pReaction->GetReactant    
103     const G4int nbProducts = pReaction->GetNbP    
104     if (nbProducts) {                             
105       for (G4int j = 0; j < nbProducts; ++j) {    
106         auto product = pReaction->GetProduct(j    
107         molVector.push_back(product);             
108       }                                           
109     }                                             
110     for(const auto& it : molVector)               
111     {                                             
112       if(it == fReactant1 || it == fReactant2     
113       {                                           
114         fAddEquilibrium = true;                   
115         fEquilibriumTime = fGlobalTime;           
116         if(fVerbose >1) {                         
117           G4cout << "Reaction type : " << pRea    
118                  << pReaction->GetReactant1()-    
119                  << pReaction->GetReactant2()-    
120           G4cout << "SetEquilibrium : on " <<     
121                  << G4BestUnit(fEquilibriumTim    
122         }                                         
123         break;                                    
124       }                                           
125     }                                             
126   }                                               
127 }